Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 0.0e+00 1285.8 674 100.0
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 0.0e+00 1087.4 635 92.8
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 1.9e-279 965.7 623 85.2
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 6.0e-278 960.7 623 84.9
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.4e-274 949.5 622 83.8
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 8.0e-198 694.5 624 63.6
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 1.3e-184 650.6 635 58.7
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.9e-184 649.0 629 59.9
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.9e-184 649.0 629 59.9
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.5e-180 637.1 631 58.8
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 6.4e-179 631.7 627 59.2
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.1e-177 626.7 630 57.8
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 7.8e-177 624.8 630 58.1
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 2.5e-175 619.8 631 58.6
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 3.3e-175 619.4 629 57.7
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.3e-175 619.4 630 58.3
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.6e-174 617.1 625 58.1
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 6.6e-168 595.1 622 55.8
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 5.6e-167 592.0 629 56.9
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 2.1e-166 590.1 617 55.9
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.6e-166 589.3 590 59.5
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.8e-165 587.0 630 55.6
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 5.3e-165 585.5 633 55.8
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 6.9e-165 585.1 642 55.3
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 2.0e-164 583.6 632 56.5
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 7.6e-164 581.6 633 55.5
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 2.4e-162 576.6 626 54.2
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 3.0e-160 569.7 631 54.7
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 3.9e-160 569.3 631 54.4
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 6.6e-160 568.5 655 53.0
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 6.6e-160 568.5 655 53.0
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 6.6e-160 568.5 635 54.2
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 8.7e-160 568.2 657 53.7
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 8.1e-158 561.6 622 54.0
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 3.8e-155 552.7 616 54.1
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 3.2e-154 549.7 631 53.6
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 2.1e-153 547.0 625 55.4
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.0e-152 544.7 632 54.1
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 5.1e-152 542.3 634 53.5
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.5e-151 540.8 633 52.9
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.5e-151 540.0 622 53.1
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.5e-151 540.0 650 52.5
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 5.6e-151 538.9 625 53.4
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 5.6e-151 538.9 627 53.1
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 6.2e-150 535.4 632 52.7
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.1e-149 534.6 626 52.2
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 1.8e-149 533.9 627 52.5
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 1.8e-149 533.9 623 52.8
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 4.0e-149 532.7 624 52.4
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 9.0e-149 531.6 663 50.4
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.2e-148 531.2 631 52.9
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.5e-148 529.3 690 49.1
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 1.7e-147 527.3 623 52.8
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 9.3e-146 521.5 646 50.5
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 3.9e-144 516.2 623 51.7
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 2.5e-143 513.5 621 51.9
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 3.1e-141 506.5 620 51.8
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 6.9e-141 505.4 639 50.5
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 2.0e-140 503.8 624 51.4
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 4.5e-140 502.7 734 45.4
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 1.4e-138 497.7 625 48.3
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.5e-137 493.0 772 43.7
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.3e-136 491.1 509 55.0
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.1e-135 488.0 622 50.2
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 6.9e-133 478.8 604 51.0
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 2.2e-131 473.8 628 49.0
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 6.5e-131 472.2 622 49.2
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 2.5e-130 470.3 620 48.5
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 1.0e-128 464.9 623 48.5
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 2.3e-128 463.8 523 54.3
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 3.0e-128 463.4 624 48.6
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 5.1e-128 462.6 493 57.2
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.5e-127 460.3 627 46.7
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 2.2e-126 457.2 618 48.2
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 8.2e-126 455.3 659 46.7
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 4.1e-125 453.0 656 46.2
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.5e-124 451.1 680 45.6
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 5.9e-124 449.1 413 62.7
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 1.3e-123 448.0 656 46.0
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 3.8e-123 446.4 628 45.4
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 2.7e-121 440.3 579 49.4
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.4e-120 438.0 697 44.0
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 9.7e-119 431.8 721 43.6
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.1e-117 428.3 509 50.7
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 4.5e-116 422.9 434 58.1
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 1.4e-112 411.4 625 43.4
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.1e-111 408.3 622 43.9
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 5.9e-108 396.0 434 55.8
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.2e-106 389.8 641 41.8
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 6.8e-104 382.5 623 43.0
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 2.6e-103 380.6 461 51.4
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 5.7e-103 379.4 469 49.9
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 9.1e-101 372.1 685 39.0
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.0e-96 358.6 631 38.8
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 2.0e-92 344.4 630 38.7
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.0e-92 344.4 635 38.6
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 3.5e-92 343.6 457 49.2
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.3e-90 337.0 418 51.0
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 1.4e-88 331.6 621 39.3
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.4e-88 331.6 623 37.7
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 2.0e-87 327.8 495 44.6
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.8e-72 278.1 188 81.4
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.9e-70 270.0 815 31.3
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 6.2e-65 253.1 375 48.5
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 9.9e-63 245.7 513 34.9
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 2.7e-60 237.7 325 50.5
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 3.6e-57 227.3 268 54.9
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.4e-56 224.6 195 61.5
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.4e-53 215.3 140 82.1
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 6.9e-48 196.4 171 64.3
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 2.8e-41 174.5 792 28.5
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 2.0e-39 168.3 725 28.8
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.0e-39 168.3 195 49.7
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.6e-36 158.7 189 47.6
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.8e-33 147.1 130 65.4
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 1.9e-26 125.2 310 34.5
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 5.7e-26 123.6 198 40.9
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.3e-19 102.4 74 71.6
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 7.7e-15 86.7 58 74.1
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.0e-14 84.0 77 63.6
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.4e-13 82.4 78 61.5
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.2e-13 81.3 80 58.8
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.5e-10 72.4 100 44.0
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.2e-09 68.6 95 45.3
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 6.9e-08 63.5 50 70.0
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 1.2e-07 62.8 34 91.2
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-06 57.8 116 40.5


User provided reference genes

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