Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.4e-131 472.2 246 100.0
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.5e-125 453.0 246 95.1
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 3.1e-99 365.5 249 81.9
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 6.5e-81 304.7 250 72.8
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 3.2e-80 302.4 251 71.7
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 2.0e-69 266.5 229 71.6
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.7e-44 182.6 246 49.6
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 8.3e-44 181.4 246 50.0
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 7.3e-40 168.3 248 46.0
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 4.7e-39 165.6 247 46.2
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 1.8e-38 163.7 247 45.7
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 3.1e-38 162.9 248 46.8
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 4.6e-34 149.1 256 43.8
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.5e-32 144.1 252 42.5
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.1e-31 140.2 247 44.1
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 4.7e-31 139.0 244 42.2
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 4.0e-30 136.0 242 39.7
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 2.6e-29 133.3 244 39.3
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.3e-28 131.0 247 40.9
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 6.6e-25 118.6 246 38.2
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 7.3e-24 115.2 253 37.2
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 8.1e-23 111.7 234 39.3
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 1.4e-22 110.9 242 39.3
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 1.7e-20 104.0 249 34.1
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 5.4e-19 99.0 245 31.4
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 3.5e-18 96.3 242 33.5
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 3.5e-18 96.3 242 35.1
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 7.9e-18 95.1 237 33.3
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 6.7e-17 92.0 247 36.0
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 7.4e-16 88.6 233 38.2
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 7.4e-16 88.6 250 30.8
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 7.4e-16 88.6 244 32.4
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 7.4e-16 88.6 259 31.7
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 3.6e-15 86.3 253 34.4
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 4.8e-15 85.9 243 31.7
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 8.1e-15 85.1 247 30.8
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 1.1e-14 84.7 243 32.9
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 1.1e-14 84.7 244 34.0
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 5.3e-14 82.4 69 56.5
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 6.9e-14 82.0 243 32.1
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 1.2e-13 81.3 250 30.0
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 1.2e-13 81.3 245 30.2
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 2.6e-13 80.1 245 30.6
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 3.4e-13 79.7 87 52.9
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 4.5e-13 79.3 276 29.0
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 4.5e-13 79.3 284 29.2
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 2.9e-12 76.6 138 39.1
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 3.8e-12 76.3 259 30.5
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 4.9e-12 75.9 215 30.7
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 4.9e-12 75.9 259 29.3
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 1.4e-11 74.3 218 32.1
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 1.9e-11 73.9 108 45.4
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 1.9e-11 73.9 244 30.3
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 4.2e-11 72.8 227 31.7
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 9.3e-11 71.6 119 42.0
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 1.2e-10 71.2 65 47.7
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 1.6e-10 70.9 263 28.9
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 3.5e-10 69.7 70 47.1
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 6.0e-10 68.9 247 28.7
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 6.0e-10 68.9 248 32.3
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 2.3e-09 67.0 252 30.6
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 3.0e-09 66.6 102 42.2
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 3.9e-09 66.2 276 29.0
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 6.7e-09 65.5 275 29.8
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 1.1e-08 64.7 150 36.7
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.5e-08 64.3 277 28.5
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 1.9e-08 63.9 251 26.7
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 3.3e-08 63.2 243 28.0
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 4.3e-08 62.8 246 28.9
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 5.6e-08 62.4 68 47.1
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 1.3e-07 61.2 216 28.2
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.3e-07 61.2 229 25.8
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 8.1e-07 58.5 250 28.0
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 1.8e-06 57.4 215 26.5
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 3.1e-06 56.6 40 50.0
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 6.9e-06 55.5 136 32.4
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 9.0e-06 55.1 249 29.3


User provided reference genes

Program Settings