Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002035g0010 Nicotiana tabacum HOM05D003703 ORTHO05D004278 1.5e-107 392.9 198 100.0
Nitab4.5_0000016g0390 Nicotiana tabacum HOM05D003703 ORTHO05D004278 2.9e-103 378.6 195 96.4
CAN.G515.11 Capsicum annuum HOM05D003703 ORTHO05D004278 2.3e-84 315.8 198 83.8
Peaxi162Scf00258g00023 Petunia axillaris HOM05D003703 ORTHO05D004278 1.1e-83 313.5 213 79.8
PGSC0003DMG400009700 Solanum tuberosum HOM05D003703 ORTHO05D004278 4.2e-62 241.9 195 70.3
Solyc03g063550.1 Solanum lycopersicum HOM05D003703 ORTHO05D004278 2.5e-54 216.1 195 64.1
Oeu035192.1 Olea europaea HOM05D003703 ORTHO05D004278 9.3e-54 214.2 199 59.3
Thecc.05G169900 Theobroma cacao HOM05D003703 ORTHO05D004278 3.9e-52 208.8 202 58.4
Ciclev10012846m.g Citrus clementina HOM05D003703 ORTHO05D004278 5.1e-52 208.4 202 59.4
CSS0005195 Camellia sinensis var. sinensis HOM05D003703 ORTHO05D004278 1.1e-51 207.2 205 58.0
Duzib093G1286 Durio zibethinus HOM05D003703 ORTHO05D004278 9.7e-51 204.1 201 56.7
COL.COLO4_36150 Corchorus olitorius HOM05D003703 ORTHO05D004278 2.2e-50 203.0 203 56.7
QL07p023397 Quercus lobata HOM05D003703 ORTHO05D004278 2.2e-50 203.0 182 59.3
Cc06_g16110 Coffea canephora HOM05D003703 ORTHO05D004278 1.4e-49 200.3 213 56.8
Migut.K00046 Erythranthe guttata HOM05D003703 ORTHO05D004278 5.3e-49 198.4 189 57.7
MSTRG.6472 Avicennia marina HOM05D003703 ORTHO05D004278 1.2e-48 197.2 197 55.3
Oeu007772.1 Olea europaea HOM05D003703 ORTHO05D004278 1.5e-48 196.8 201 58.7
Atru.chr8.1077 Acer truncatum HOM05D003703 ORTHO05D004278 2.0e-48 196.4 209 56.9
ECA247G0725 Erigeron canadensis HOM05D003703 ORTHO05D004278 2.0e-48 196.4 213 55.9
HanXRQChr10g0300741 Helianthus annuus HOM05D003703 ORTHO05D004278 5.9e-48 194.9 193 53.9
Sabra16G0051300 Salix brachista HOM05D003703 ORTHO05D004278 1.0e-47 194.1 200 51.5
Duzib106G1084 Durio zibethinus HOM05D003703 ORTHO05D004278 1.3e-47 193.7 201 53.2
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla HOM05D003703 ORTHO05D004278 1.7e-47 193.4 185 57.8
CiPaw.10G027200 Carya illinoinensis HOM05D003703 ORTHO05D004278 2.9e-47 192.6 181 54.7
Gohir.A09G127300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.9e-47 192.6 190 56.8
Gohir.D09G123500 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.9e-47 192.6 189 56.1
Gorai.006G142100 Gossypium raimondii HOM05D003703 ORTHO05D004278 2.9e-47 192.6 189 56.1
Potri.006G191100 Populus trichocarpa HOM05D003703 ORTHO05D004278 2.9e-47 192.6 197 55.3
CiPaw.09G031500 Carya illinoinensis HOM05D003703 ORTHO05D004278 6.5e-47 191.4 180 56.1
Potri.016G047800 Populus trichocarpa HOM05D003703 ORTHO05D004278 8.5e-47 191.0 200 52.5
Actinidia38577 Actinidia chinensis HOM05D003703 ORTHO05D004278 1.4e-46 190.3 176 57.4
DCAR_013556 Daucus carota HOM05D003703 ORTHO05D004278 1.4e-46 190.3 177 57.1
Manes.09G033600 Manihot esculenta HOM05D003703 ORTHO05D004278 1.4e-46 190.3 179 54.7
MSTRG.19899 Avicennia marina HOM05D003703 ORTHO05D004278 1.9e-46 189.9 211 53.6
Gorai.006G067100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.6e-45 186.8 202 55.0
Lsat_1_v5_gn_9_26721 Lactuca sativa HOM05D003703 ORTHO05D004278 1.6e-45 186.8 215 54.0
Gohir.D04G098100 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.1e-45 186.4 202 54.5
Sabra06G0146400 Salix brachista HOM05D003703 ORTHO05D004278 4.6e-45 185.3 189 52.9
Cpa.g.c33371 Carica papaya HOM05D003703 ORTHO05D004278 1.4e-44 183.7 199 51.8
FAN02G0416 Fragaria x ananassa HOM05D003703 ORTHO05D004278 3.9e-44 182.2 216 53.2
FAN05G5107 Fragaria x ananassa HOM05D003703 ORTHO05D004278 3.9e-44 182.2 216 53.2
FAN09G0581 Fragaria x ananassa HOM05D003703 ORTHO05D004278 3.9e-44 182.2 216 53.7
Manes.08G045500 Manihot esculenta HOM05D003703 ORTHO05D004278 3.9e-44 182.2 201 51.2
Gohir.D01G177600 Gossypium hirsutum HOM05D003703 ORTHO05D004278 5.1e-44 181.8 202 55.0
AUR62012046 Chenopodium quinoa HOM05D003703 ORTHO05D004278 8.8e-44 181.0 199 52.3
Sopen03g016210 Solanum pennellii HOM05D003703 ORTHO05D004278 2.0e-43 179.9 120 77.5
SGA_v2.0_scaffold4546G54500 Striga asiatica HOM05D003703 ORTHO05D004278 4.3e-43 178.7 218 50.0
FvH4_6g22530 Fragaria vesca HOM05D003703 ORTHO05D004278 5.7e-43 178.3 216 52.3
FAN14G3432 Fragaria x ananassa HOM05D003703 ORTHO05D004278 5.7e-43 178.3 216 52.3
FAN14G3905 Fragaria x ananassa HOM05D003703 ORTHO05D004278 5.7e-43 178.3 216 52.3
Gorai.002G225600 Gossypium raimondii HOM05D003703 ORTHO05D004278 5.7e-43 178.3 202 54.5
Gohir.A01G192300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.2e-42 176.4 202 54.5
Lj2P370T14 Lonicera japonica HOM05D003703 ORTHO05D004278 6.3e-42 174.9 180 55.6
MD14G1059200 Malus domestica HOM05D003703 ORTHO05D004278 6.3e-42 174.9 208 51.9
Ah.13g075990 Amaranthus hybridus HOM05D003703 ORTHO05D004278 8.2e-42 174.5 230 48.7
RcHm_v2.0_Chr3g0479981 Rosa chinensis HOM05D003703 ORTHO05D004278 1.1e-41 174.1 217 50.7
Dinv24085 Davidia involucrata HOM05D001227 ORTHO05D001082 1.4e-41 173.7 182 56.0
Actinidia40438 Actinidia chinensis HOM05D003703 ORTHO05D004278 1.8e-41 173.3 192 56.2
DCAR_017017 Daucus carota HOM05D003703 ORTHO05D004278 3.1e-41 172.6 209 53.1
MD12G1058500 Malus domestica HOM05D003703 ORTHO05D004278 1.5e-40 170.2 185 53.5
Cfa020181 Carpinus fangiana HOM05D003703 ORTHO05D004278 2.0e-40 169.9 205 50.7
SGA_v2.0_scaffold94G28431 Striga asiatica HOM05D003703 ORTHO05D004278 2.6e-40 169.5 196 48.0
Actinidia22024 Actinidia chinensis HOM05D003703 ORTHO05D004278 3.4e-40 169.1 185 56.2
Lju124C28G5 Lonicera japonica HOM05D003703 ORTHO05D004278 7.7e-40 167.9 184 55.4
Lsat_1_v5_gn_8_74300 Lactuca sativa HOM05D003703 ORTHO05D004278 1.0e-39 167.5 173 53.8
Lalb_Chr18g0047801 Lupinus albus HOM05D003703 ORTHO05D004278 1.0e-39 167.5 196 49.5
DCAR_017016 Daucus carota HOM05D003703 ORTHO05D004278 1.7e-39 166.8 205 53.2
SalBow1G5050 Salvia bowleyana HOM05D003703 ORTHO05D004278 5.0e-39 165.2 199 51.3
MSTRG.10837 Avicennia marina HOM05D003703 ORTHO05D004278 6.5e-39 164.9 198 51.5
Prupe.7G075500 Prunus persica HOM05D003703 ORTHO05D004278 2.5e-38 162.9 203 51.2
TWI53G0257 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 2.5e-38 162.9 178 53.4
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 2.5e-38 162.9 201 48.8
THA.LOC104826767 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 3.2e-38 162.5 206 46.6
ClCG09G019210 Citrullus lanatus HOM05D003703 ORTHO05D004278 7.2e-38 161.4 197 51.8
Lalb_Chr15g0078951 Lupinus albus HOM05D003703 ORTHO05D004278 9.4e-38 161.0 204 46.1
PSO675G1999 Papaver somniferum HOM05D003703 ORTHO05D004278 9.4e-38 161.0 204 47.5
Migut.J01826 Erythranthe guttata HOM05D003703 ORTHO05D004278 1.2e-37 160.6 187 52.4
TWI74G0378 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 1.2e-37 160.6 190 51.1
Sed0017921 Sechium edule HOM05D003703 ORTHO05D004278 1.6e-37 160.2 203 51.7
Rhsim03G0008400 Rhododendron simsii HOM05D003703 ORTHO05D004278 2.7e-37 159.5 213 51.2
Eucgr.K01832 Eucalyptus grandis HOM05D003703 ORTHO05D004278 3.6e-37 159.1 187 50.8
MELO3C021570.2 Cucumis melo HOM05D003703 ORTHO05D004278 1.0e-36 157.5 199 50.3
CsaV3_5G027200 Cucumis sativus L. HOM05D003703 ORTHO05D004278 1.0e-36 157.5 202 50.5
TAR369G1018 Trochodendron aralioides HOM05D003703 ORTHO05D004278 5.1e-36 155.2 204 50.5
Aqoxy2G00073 Aquilegia oxysepala HOM05D003703 ORTHO05D004278 7.4e-35 151.4 204 46.1
MBI01_g36100_MAGBIO Magnolia biondii HOM05D003703 ORTHO05D004278 1.3e-34 150.6 179 50.8
CANSAT64G0621 Cannabis sativa HOM05D003703 ORTHO05D004278 1.7e-34 150.2 226 47.3
Carub.0006s0568 Capsella rubella HOM05D003703 ORTHO05D004278 1.7e-34 150.2 214 45.3
BolC8t50948H Brassica oleracea HOM05D003703 ORTHO05D004278 3.7e-34 149.1 182 48.4
SalBow1G5631 Salvia bowleyana HOM05D003703 ORTHO05D004278 3.7e-34 149.1 155 52.9
EL10Ac3g06932 Beta vulgaris HOM05D003703 ORTHO05D004278 6.3e-34 148.3 149 55.7
C08p33500 Brassica napus HOM05D003703 ORTHO05D004278 1.1e-33 147.5 182 48.4
A09p50780 Brassica napus HOM05D003703 ORTHO05D004278 1.4e-33 147.1 184 48.4
BraA09t40525Z Brassica rapa HOM05D003703 ORTHO05D004278 1.4e-33 147.1 184 48.4
SalBow6G1024 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.4e-33 147.1 182 50.5
SalBow6G3273 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.4e-33 147.1 182 50.5
Sp5g04770 Schrenkiella parvula HOM05D003703 ORTHO05D004278 1.8e-33 146.7 180 50.0
BraA04t16007Z Brassica rapa HOM05D003703 ORTHO05D004278 1.2e-32 144.1 191 47.6
Haze_19973 Corylus avellana HOM05D003703 ORTHO05D004278 1.2e-32 144.1 122 61.5
BcaB02g08287 Brassica carinata HOM05D003703 ORTHO05D004278 1.6e-32 143.7 173 49.1
AUR62024314 Chenopodium quinoa HOM05D003703 ORTHO05D004278 1.6e-32 143.7 156 52.6
A04p02830 Brassica napus HOM05D003703 ORTHO05D004278 2.0e-32 143.3 191 47.6
Lj1g0027593 Lotus japonicus HOM05D003703 ORTHO05D004278 2.0e-32 143.3 198 47.5
Medtr7g093040 Medicago truncatula HOM05D003703 ORTHO05D004278 2.0e-32 143.3 190 45.3
AL6G16900 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 3.5e-32 142.5 212 44.3
Thhalv10006259m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 4.5e-32 142.1 172 48.3
Sp6g36065 Schrenkiella parvula HOM05D003703 ORTHO05D004278 4.5e-32 142.1 201 45.8
VMungo1383G3663 Vigna mungo HOM05D003703 ORTHO05D004278 4.5e-32 142.1 213 46.0
Phvul.001G141500 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 5.9e-32 141.7 213 46.0
THA.LOC104802486 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 5.9e-32 141.7 201 47.8
BcaC06g32542 Brassica carinata HOM05D003703 ORTHO05D004278 7.7e-32 141.4 203 45.8
AL5G39600 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 1.0e-31 141.0 172 48.3
Thhalv10014619m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 1.0e-31 141.0 219 43.4
Psat3g069120 Pisum sativum HOM05D003703 ORTHO05D004278 1.0e-31 141.0 210 44.8
Carub.0005s2479 Capsella rubella HOM05D003703 ORTHO05D004278 1.3e-31 140.6 180 47.8
DCAR_019841 Daucus carota HOM05D003703 ORTHO05D004278 2.2e-31 139.8 108 63.9
AT5G06790 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 2.9e-31 139.4 184 46.2
AT3G57950 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 3.8e-31 139.0 187 47.6
BcaC07g40166 Brassica carinata HOM05D003703 ORTHO05D004278 3.8e-31 139.0 172 48.3
A10p29590 Brassica napus HOM05D003703 ORTHO05D004278 3.8e-31 139.0 186 45.2
BraA10t45001Z Brassica rapa HOM05D003703 ORTHO05D004278 3.8e-31 139.0 186 45.2
Glyma.09G112700 Glycine max HOM05D003703 ORTHO05D004278 6.5e-31 138.3 191 46.1
CARHR206390 Cardamine hirsuta HOM05D003703 ORTHO05D004278 8.5e-31 137.9 192 47.4
Ah.04g152400 Amaranthus hybridus HOM05D003703 ORTHO05D004278 1.1e-30 137.5 150 51.3
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea HOM05D003703 ORTHO05D004278 1.1e-30 137.5 195 44.6
Glyma.19G146900 Glycine max HOM05D003703 ORTHO05D004278 1.1e-30 137.5 214 46.3
Glyma.03G143800 Glycine max HOM05D003703 ORTHO05D004278 1.9e-30 136.7 213 44.6
Aa31LG10G12650 Aethionema arabicum HOM05D003703 ORTHO05D004278 3.2e-30 136.0 178 47.2
PGR004G2865 Punica granatum HOM05D003703 ORTHO05D004278 4.2e-30 135.6 196 42.9
ECA248G0990 Erigeron canadensis HOM05D003703 ORTHO05D004278 9.4e-30 134.4 182 46.2
C04p34420 Brassica napus HOM05D003703 ORTHO05D004278 1.2e-29 134.0 190 44.7
ECA236G4442 Erigeron canadensis HOM05D003703 ORTHO05D004278 1.2e-29 134.0 199 45.7
Glyma.02G178400 Glycine max HOM05D003703 ORTHO05D004278 1.6e-29 133.7 190 42.1
Lalb_Chr07g0188981 Lupinus albus HOM05D003703 ORTHO05D004278 2.1e-29 133.3 220 41.8
BcaC02g09974 Brassica carinata HOM05D003703 ORTHO05D004278 2.7e-29 132.9 173 45.7
BcaC02g09973 Brassica carinata HOM05D003703 ORTHO05D004278 3.6e-29 132.5 170 47.6
BolC4t25006H Brassica oleracea HOM05D003703 ORTHO05D004278 6.1e-29 131.7 190 45.3
Phvul.007G258900 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 6.1e-29 131.7 208 43.3
Psat6g128520 Pisum sativum HOM05D003703 ORTHO05D004278 8.0e-29 131.3 190 43.2
Sed0013585 Sechium edule HOM05D003703 ORTHO05D004278 8.0e-29 131.3 180 47.2
CARHR168260 Cardamine hirsuta HOM05D003703 ORTHO05D004278 1.0e-28 131.0 176 46.6
TPR.G27747 Trifolium pratense HOM05D003703 ORTHO05D004278 2.3e-28 129.8 203 45.3
VMungo0720G2172 Vigna mungo HOM05D003703 ORTHO05D004278 8.8e-28 127.9 188 44.7
C04p34430 Brassica napus HOM05D003703 ORTHO05D004278 1.5e-27 127.1 187 44.4
Lj5g0003065 Lotus japonicus HOM05D003703 ORTHO05D004278 1.5e-27 127.1 196 40.3
Ca_08513_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 2.0e-27 126.7 159 45.9
TPR.G18214 Trifolium pratense HOM05D003703 ORTHO05D004278 2.6e-27 126.3 196 44.4
BcaC06g32394 Brassica carinata HOM05D003703 ORTHO05D004278 4.4e-27 125.6 211 40.3
BolC9t59739H Brassica oleracea HOM05D003703 ORTHO05D004278 4.4e-27 125.6 211 40.3
C09p69970 Brassica napus HOM05D003703 ORTHO05D004278 5.7e-27 125.2 212 40.1
PGR142G3046 Punica granatum HOM05D003703 ORTHO05D004278 7.5e-27 124.8 210 43.8
PSO339G4803 Papaver somniferum HOM05D003703 ORTHO05D004278 9.7e-27 124.4 140 49.3
Medtr1g053900 Medicago truncatula HOM05D003703 ORTHO05D004278 2.8e-26 122.9 195 43.1
BcaB02g08285 Brassica carinata HOM05D003703 ORTHO05D004278 6.3e-26 121.7 177 44.1
HanXRQChr13g0389341 Helianthus annuus HOM05D003703 ORTHO05D004278 2.4e-25 119.8 170 42.9
PSO017G5564 Papaver somniferum HOM05D003703 ORTHO05D004278 2.0e-24 116.7 135 47.4
Sc13g0002220 Simmondsia chinensis HOM05D003703 ORTHO05D004278 1.3e-23 114.0 193 42.5
ClCG10G017430 Citrullus lanatus HOM05D003703 ORTHO05D004278 2.2e-23 113.2 185 40.5
PSO063G6729 Papaver somniferum HOM05D003703 ORTHO05D004278 5.0e-23 112.1 124 50.0
Sc25g0005120 Simmondsia chinensis HOM05D003703 ORTHO05D004278 2.5e-22 109.8 110 54.5
Sp4g24360 Schrenkiella parvula HOM05D003703 ORTHO05D004278 4.2e-22 109.0 179 43.0
Eucgr.A02445 Eucalyptus grandis HOM05D003703 ORTHO05D004278 1.2e-21 107.5 169 43.8
THA.LOC104824607 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 3.0e-20 102.8 126 48.4
CsaV3_3G038930 Cucumis sativus L. HOM05D003703 ORTHO05D004278 4.0e-20 102.4 164 40.9
AT2G42180 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 1.2e-19 100.9 185 41.6
Sc19g0006980 Simmondsia chinensis HOM05D003703 ORTHO05D004278 2.0e-19 100.1 277 32.1
BraA05t19267Z Brassica rapa HOM05D003703 ORTHO05D004278 4.4e-19 99.0 182 42.3
BolC4t21971H Brassica oleracea HOM05D003703 ORTHO05D004278 5.7e-19 98.6 182 41.8
BcaNung04405 Brassica carinata HOM05D003703 ORTHO05D004278 7.5e-19 98.2 184 42.4
AL4G40540 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 9.8e-19 97.8 180 41.7
BcaC02g12466 Brassica carinata HOM05D003703 ORTHO05D004278 9.8e-19 97.8 185 41.1
SHI16104 Sapria himalayana HOM05D003703 ORTHO05D004278 9.8e-19 97.8 187 42.2
C04p03340 Brassica napus HOM05D003703 ORTHO05D004278 2.2e-18 96.7 185 40.5
A05p02750 Brassica napus HOM05D003703 ORTHO05D004278 3.7e-18 95.9 182 41.8
CDE05G1581 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 8.3e-18 94.7 163 38.0
Ca_25700_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 7.0e-17 91.7 122 43.4
Carub.0004s2452 Capsella rubella HOM05D003703 ORTHO05D004278 9.1e-17 91.3 188 40.4
CDE02G1004 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 2.2e-15 86.7 163 35.0
Zm00001eb067170 Zea mays HOM05D003703 ORTHO05D004278 7.2e-14 81.6 201 33.3
Gohir.A04G052101 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.7e-13 79.7 121 41.3
Os09g0279200 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 4.7e-13 79.0 84 52.4
Os04g0665666 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 8.3e-10 68.2 152 34.2
Aa31sc24G60 Aethionema arabicum HOM05D003703 ORTHO05D004278 3.1e-09 66.2 61 55.7
ATR0605G366 Amborella trichopoda HOM05D003703 ORTHO05D004278 5.4e-09 65.5 153 30.7
MELO3C009637.2 Cucumis melo HOM05D003703 ORTHO05D004278 6.6e-07 58.5 132 37.1


User provided reference genes

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