Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 9.5e-189 663.7 422 100.0
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.2e-127 460.7 430 79.8
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.8e-70 270.8 426 60.1
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 4.0e-54 216.5 434 39.2
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 5.2e-54 216.1 141 77.3
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 8.9e-54 215.3 141 77.3
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 3.4e-53 213.4 427 49.9
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 3.4e-53 213.4 133 79.7
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 4.2e-51 206.5 426 40.1
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.6e-50 204.5 422 37.7
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.3e-49 200.7 424 38.7
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 3.3e-48 196.8 482 48.3
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 5.6e-48 196.1 162 69.8
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.6e-47 194.5 138 69.6
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 4.7e-47 193.0 422 37.4
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 2.4e-46 190.7 406 44.6
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 3.1e-46 190.3 423 36.9
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 9.0e-46 188.7 209 53.1
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 6.4e-44 182.6 114 76.3
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 3.2e-43 180.3 184 56.0
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 5.4e-43 179.5 117 73.5
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 7.8e-42 175.6 167 61.1
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 8.7e-41 172.2 182 54.4
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 8.7e-41 172.2 125 68.0
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 8.7e-41 172.2 187 54.5
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 1.5e-40 171.4 422 34.4
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 1.9e-40 171.0 144 63.9
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.9e-40 171.0 422 34.6
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 5.6e-40 169.5 144 63.2
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 1.3e-39 168.3 209 50.7
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 4.8e-39 166.4 117 68.4
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 6.2e-39 166.0 138 61.6
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 8.1e-39 165.6 142 60.6
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 8.1e-39 165.6 181 55.2
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 3.1e-38 163.7 117 68.4
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 5.3e-38 162.9 111 71.2
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 5.3e-38 162.9 146 61.0
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 6.9e-38 162.5 209 50.2
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 1.2e-37 161.8 220 49.1
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 1.2e-37 161.8 144 61.8
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.5e-37 161.4 154 57.8
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 1.5e-37 161.4 174 55.2
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 3.4e-37 160.2 212 49.1
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 4.5e-37 159.8 111 70.3
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 5.8e-37 159.5 423 34.3
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 5.8e-37 159.5 128 63.3
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 9.9e-37 158.7 214 47.7
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 1.3e-36 158.3 120 68.3
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.3e-36 158.3 121 64.5
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.7e-36 157.9 139 62.6
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 1.7e-36 157.9 124 62.9
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 1.7e-36 157.9 428 36.7
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 3.8e-36 156.8 123 63.4
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 3.8e-36 156.8 173 49.1
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 4.9e-36 156.4 201 50.7
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.9e-36 156.4 111 64.9
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 6.4e-36 156.0 181 52.5
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 6.4e-36 156.0 202 49.0
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.1e-35 155.2 207 47.8
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 1.1e-35 155.2 111 67.6
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 1.4e-35 154.8 111 67.6
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 2.4e-35 154.1 119 64.7
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 3.2e-35 153.7 423 39.0
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 4.2e-35 153.3 426 35.9
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 5.4e-35 152.9 181 50.3
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 5.4e-35 152.9 120 61.7
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 5.4e-35 152.9 193 50.3
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 9.3e-35 152.1 195 48.7
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 1.2e-34 151.8 179 48.6
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 2.1e-34 151.0 178 52.2
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 2.7e-34 150.6 121 60.3
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 2.7e-34 150.6 178 50.0
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 2.7e-34 150.6 187 49.2
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 3.5e-34 150.2 109 62.4
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 3.5e-34 150.2 207 45.9
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.6e-34 149.8 434 47.9
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 4.6e-34 149.8 178 50.0
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 6.0e-34 149.4 428 36.2
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 7.9e-34 149.1 205 49.3
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 7.9e-34 149.1 189 51.9
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 7.9e-34 149.1 121 59.5
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.0e-33 148.7 175 52.0
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 1.0e-33 148.7 119 60.5
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.8e-33 147.9 129 57.4
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 2.3e-33 147.5 183 53.6
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 2.3e-33 147.5 142 57.7
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 2.3e-33 147.5 142 57.7
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 2.3e-33 147.5 142 57.7
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 2.3e-33 147.5 142 57.7
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 2.3e-33 147.5 142 57.7
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 2.3e-33 147.5 186 52.2
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 3.9e-33 146.7 171 52.0
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 5.1e-33 146.4 171 52.0
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 5.1e-33 146.4 158 55.1
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 5.1e-33 146.4 176 51.7
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 6.7e-33 146.0 201 49.8
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 8.7e-33 145.6 415 35.2
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 8.7e-33 145.6 176 48.9
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 1.1e-32 145.2 117 59.0
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 1.1e-32 145.2 128 56.2
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.1e-32 145.2 128 58.6
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 1.5e-32 144.8 441 46.3
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 1.9e-32 144.4 111 64.9
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 1.9e-32 144.4 189 47.1
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 4.3e-32 143.3 115 58.3
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 4.3e-32 143.3 175 48.0
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 7.4e-32 142.5 145 57.9
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 7.4e-32 142.5 178 48.3
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 7.4e-32 142.5 157 51.0
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 1.3e-31 141.7 136 58.1
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.6e-31 141.4 118 59.3
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 2.1e-31 141.0 162 53.7
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 2.1e-31 141.0 186 51.1
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.8e-31 140.6 154 52.6
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 3.7e-31 140.2 172 46.5
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 4.8e-31 139.8 145 53.8
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 4.8e-31 139.8 213 44.6
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 6.2e-31 139.4 112 64.3
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 6.2e-31 139.4 164 51.8
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 6.2e-31 139.4 129 53.5
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 8.1e-31 139.0 188 46.3
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.1e-30 138.7 208 45.7
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 1.4e-30 138.3 439 37.8
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 2.4e-30 137.5 109 60.6
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 3.1e-30 137.1 107 60.7
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 4.0e-30 136.7 255 41.6
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 4.0e-30 136.7 255 41.6
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 4.0e-30 136.7 255 41.6
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 4.0e-30 136.7 255 41.6
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 4.0e-30 136.7 447 36.9
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 9.0e-30 135.6 204 46.6
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 9.0e-30 135.6 111 57.7
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 9.0e-30 135.6 412 40.3
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.2e-29 135.2 179 49.7
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 1.5e-29 134.8 415 34.9
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 4.5e-29 133.3 187 47.1
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 4.5e-29 133.3 197 43.7
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 7.6e-29 132.5 118 55.1
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 9.9e-29 132.1 162 48.1
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 9.9e-29 132.1 424 41.5
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 1.7e-28 131.3 234 41.0
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 2.2e-28 131.0 427 31.4
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 2.2e-28 131.0 173 47.4
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.9e-28 130.6 167 48.5
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 6.4e-28 129.4 175 45.1
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 8.4e-28 129.0 540 37.2
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.4e-27 128.3 136 55.1
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 2.5e-27 127.5 195 43.6
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 5.5e-27 126.3 184 45.7
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 1.6e-26 124.8 115 56.5
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 2.1e-26 124.4 115 55.7
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 2.1e-26 124.4 102 59.8
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 2.7e-26 124.0 115 55.7
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 2.7e-26 124.0 115 55.7
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 2.7e-26 124.0 115 55.7
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 3.5e-26 123.6 111 57.7
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 5.1e-25 119.8 128 52.3
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 5.1e-25 119.8 105 56.2
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 8.7e-25 119.0 135 51.9
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 8.7e-25 119.0 91 61.5
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 8.7e-25 119.0 92 63.0
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 1.3e-23 115.2 154 45.5
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 8.2e-23 112.5 128 50.0
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 8.2e-23 112.5 134 49.3
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 6.9e-22 109.4 185 43.2
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 2.6e-21 107.5 99 56.6
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.7e-20 104.8 110 50.0
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 6.9e-14 82.8 106 48.1
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 5.9e-13 79.7 103 44.7
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.7e-12 78.2 144 40.3
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 2.2e-12 77.8 172 38.4
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 6.5e-12 76.3 134 40.3
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 9.4e-11 72.4 121 41.3
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 6.1e-10 69.7 106 38.7
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 6.1e-10 69.7 67 53.7
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 3.9e-09 67.0 161 34.8
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 8.8e-09 65.9 106 38.7
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.7e-07 61.6 113 34.5
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.8e-07 60.8 87 42.5
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 3.7e-07 60.5 199 31.7
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 4.8e-07 60.1 104 37.5
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 1.4e-06 58.5 103 38.8
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 5.3e-06 56.6 38 55.3


User provided reference genes

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