Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002026g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.9e-75 285.8 147 100.0
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.8e-52 208.4 168 72.0
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.9e-35 152.9 296 40.5
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-30 136.7 127 65.4
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-30 136.0 118 69.5
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.0e-30 134.4 210 45.2
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.5e-29 131.7 156 50.6
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.9e-28 129.0 172 53.5
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.2e-27 125.2 107 69.2
Nitab4.5_0003484g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.2e-27 125.2 218 40.8
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-26 123.6 117 65.8
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.6e-26 122.1 69 89.9
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.1e-26 121.3 117 62.4
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.1e-26 121.3 220 43.6
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.0e-26 120.9 129 61.2
Nitab4.5_0000270g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-25 119.4 161 50.3
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.2e-25 118.2 224 39.7
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-24 117.1 97 69.1
Nitab4.5_0001401g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.4e-24 115.2 69 85.5
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-23 113.2 81 76.5
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-23 113.2 118 63.6
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.3e-23 110.9 69 84.1
Nitab4.5_0001065g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-22 110.5 76 76.3
Nitab4.5_0000248g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.4e-22 108.2 67 82.1
Nitab4.5_0005116g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.7e-21 105.9 63 85.7
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.2e-19 98.6 117 57.3
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.2e-19 98.6 279 34.4
Nitab4.5_0005964g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-18 95.9 169 45.6
Nitab4.5_0011105g0030 Nicotiana tabacum HOM05D003329 ORTHO05D000013 4.0e-17 92.0 109 57.8
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.2e-17 91.7 117 54.7
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.2e-17 91.7 124 51.6
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-14 84.0 76 68.4
Nitab4.5_0000073g0200 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.4e-14 81.6 78 65.4
Nitab4.5_0008332g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.2e-14 80.9 79 67.1
Nitab4.5_0001309g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.0e-13 79.7 87 59.8
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-12 76.6 70 67.1
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 6.6e-12 74.7 69 55.1
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 3.3e-11 72.4 69 55.1
Peaxi162Scf00073g00225 Petunia axillaris HOM05D003329 ORTHO05D006664 4.3e-11 72.0 116 38.8
Peaxi162Scf00765g00129 Petunia axillaris HOM05D003329 ORTHO05D006664 1.2e-10 70.5 69 53.6
Nitab4.5_0001817g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-10 70.1 39 84.6
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 2.1e-10 69.7 116 37.9
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 2.1e-10 69.7 116 37.9
Peaxi162Scf00145g00105 Petunia axillaris HOM05D003329 ORTHO05D006664 2.8e-10 69.3 116 37.9
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 3.6e-10 68.9 123 45.5
Peaxi162Scf00884g00022 Petunia axillaris HOM05D003329 ORTHO05D006664 3.6e-10 68.9 56 58.9
Peaxi162Scf01176g00135 Petunia axillaris HOM05D003329 ORTHO05D006664 3.6e-10 68.9 66 54.5
Peaxi162Scf04852g00001 Petunia axillaris HOM05D003329 ORTHO05D006664 3.6e-10 68.9 116 37.9
Peaxi162Scf00237g01212 Petunia axillaris HOM05D003329 ORTHO05D006664 8.0e-10 67.8 232 28.4
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 8.0e-10 67.8 65 55.4
Nitab4.5_0001309g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-09 67.4 50 70.0
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 2.3e-09 66.2 72 55.6
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 2.3e-09 66.2 106 42.5
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 3.1e-09 65.9 72 55.6
Nitab4.5_0000901g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.2e-09 65.1 50 68.0
Nitab4.5_0005015g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.8e-09 64.7 112 49.1
Nitab4.5_0000073g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-08 63.5 50 68.0
Nitab4.5_0000329g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-08 63.5 49 65.3
Nitab4.5_0001696g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-08 63.5 42 78.6
Nitab4.5_0001996g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-08 63.5 41 75.6
CAN.G26.44 Capsicum annuum HOM05D003329 ORTHO05D006664 2.0e-08 63.2 72 51.4
CAN.G675.4 Capsicum annuum HOM05D000040 ORTHO05D009963 2.0e-08 63.2 74 52.7
Nitab4.5_0022071g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.6e-08 62.8 50 68.0
Nitab4.5_0009435g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.4e-08 62.4 50 66.0
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 4.4e-08 62.0 95 43.2
Nitab4.5_0000682g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.8e-08 61.6 50 64.0
Peaxi162Scf00385g00063 Petunia axillaris HOM05D003329 ORTHO05D006664 9.8e-08 60.8 132 34.1
Nitab4.5_0000965g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-07 60.5 235 28.9
Nitab4.5_0001653g0010 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.7e-07 60.1 50 60.0
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.9e-07 59.3 103 40.8
CAN.G255.13 Capsicum annuum HOM05D003329 ORTHO05D006664 3.7e-07 58.9 69 52.2
Peaxi162Scf00802g00124 Petunia axillaris HOM05D003329 ORTHO05D006664 6.4e-07 58.2 116 35.3
Nitab4.5_0001065g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-06 57.0 44 63.6
Sopen07g013090 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 74 47.3
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.4e-06 57.0 94 43.6
Peaxi162Scf00802g00125 Petunia axillaris HOM05D003329 ORTHO05D006664 2.4e-06 56.2 116 34.5
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.4e-06 56.2 94 42.6
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.4e-06 56.2 94 42.6
Nitab4.5_0001696g0160 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.1e-06 55.5 30 90.0
Solyc10g054410.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 4.1e-06 55.5 74 45.9
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 5.4e-06 55.1 103 39.8


User provided reference genes

Program Settings