Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002026g0160 Nicotiana tabacum HOM05D004500 ORTHO05D005775 5.4e-162 574.3 298 100.0
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 4.7e-150 534.6 298 95.0
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 4.7e-142 508.1 298 89.9
Peaxi162Scf00029g02523 Petunia axillaris HOM05D004500 ORTHO05D005775 6.2e-142 507.7 298 89.9
Solyc11g062320.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 6.4e-139 497.7 299 88.6
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 7.8e-137 490.7 298 86.9
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 7.1e-106 387.9 298 68.1
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 8.7e-104 380.9 298 67.4
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 3.3e-103 379.0 294 65.3
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 9.0e-101 370.9 298 63.8
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 2.0e-100 369.8 298 65.1
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 1.3e-99 367.1 298 65.8
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 2.2e-99 366.3 297 63.0
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 1.1e-98 364.0 298 65.1
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 3.2e-98 362.5 296 62.5
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 7.1e-98 361.3 288 64.9
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 9.3e-98 360.9 284 64.8
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 1.2e-97 360.5 289 64.0
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 1.2e-97 360.5 282 64.2
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 1.6e-97 360.1 298 63.1
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 1.6e-97 360.1 298 64.1
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 2.7e-97 359.4 298 63.4
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 7.9e-97 357.8 281 64.8
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 1.3e-96 357.1 315 61.6
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 3.0e-96 355.9 298 63.4
VMungo0647G1179 Vigna mungo HOM05D004500 ORTHO05D005775 3.0e-96 355.9 298 62.4
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 5.1e-96 355.1 298 63.1
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 5.1e-96 355.1 277 65.0
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 8.7e-96 354.4 298 61.1
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 1.9e-95 353.2 298 63.8
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 1.9e-95 353.2 298 62.1
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 3.3e-95 352.4 298 61.4
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 4.3e-95 352.1 298 62.1
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 4.3e-95 352.1 292 60.6
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 1.3e-94 350.5 297 62.6
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 1.3e-94 350.5 298 61.7
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 1.3e-94 350.5 293 61.1
COL.COLO4_06618 Corchorus olitorius HOM05D004500 ORTHO05D005775 1.6e-94 350.1 292 62.0
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 3.7e-94 349.0 286 62.9
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 3.7e-94 349.0 298 62.8
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 3.7e-94 349.0 295 61.0
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 1.1e-93 347.4 286 62.6
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 2.4e-93 346.3 296 61.1
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 4.0e-93 345.5 290 60.3
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 5.3e-93 345.1 298 59.1
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 1.5e-92 343.6 283 61.5
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 3.4e-92 342.4 287 61.3
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 4.5e-92 342.0 298 60.4
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 5.8e-92 341.7 295 59.3
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 1.0e-91 340.9 287 61.0
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 1.0e-91 340.9 295 59.0
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 1.3e-91 340.5 298 60.1
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 2.2e-91 339.7 296 60.5
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 2.2e-91 339.7 298 61.4
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 4.9e-91 338.6 298 60.1
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 1.1e-90 337.4 283 60.4
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 1.1e-90 337.4 284 59.9
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 1.4e-90 337.0 298 59.7
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 1.9e-90 336.7 299 58.9
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 2.5e-90 336.3 286 59.8
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 2.5e-90 336.3 289 59.9
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 3.2e-90 335.9 284 62.7
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 7.1e-90 334.7 286 59.4
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 1.6e-89 333.6 296 60.1
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 2.1e-89 333.2 289 59.2
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 4.6e-89 332.0 298 60.7
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 4.6e-89 332.0 298 58.1
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 1.0e-88 330.9 287 58.5
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 1.8e-88 330.1 278 60.4
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 2.3e-88 329.7 303 57.8
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 3.0e-88 329.3 300 57.7
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 4.3e-87 325.5 284 59.5
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 1.6e-86 323.6 283 61.8
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 2.1e-86 323.2 278 59.7
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 2.8e-86 322.8 284 58.5
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 8.2e-86 321.2 298 57.0
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 8.2e-86 321.2 284 58.1
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 5.3e-85 318.5 284 58.5
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 5.0e-83 312.0 288 55.9
Haze_23272 Corylus avellana HOM05D004500 ORTHO05D005775 2.7e-81 306.2 300 56.7
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 2.5e-79 299.7 324 52.5
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 4.3e-79 298.9 284 56.0
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 1.6e-78 297.0 324 51.9
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 8.2e-78 294.7 298 51.7
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 4.2e-74 282.3 277 53.4
FAN21G2043 Fragaria x ananassa HOM05D004500 ORTHO05D005775 7.2e-74 281.6 295 51.9
Hma1.2p1_0460F.1_g157660 Hydrangea macrophylla HOM05D004500 ORTHO05D005775 2.2e-70 270.0 203 69.5
SEGI_37322 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 4.5e-68 262.3 276 50.4
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 5.5e-66 255.4 208 62.0
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 2.2e-59 233.4 284 46.5
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 2.3e-56 223.4 269 46.8
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 6.7e-56 221.9 269 45.7
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 1.7e-54 217.2 284 43.3
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 1.7e-51 207.2 275 41.8
EL10Ac5g11937 Beta vulgaris HOM05D004500 ORTHO05D005775 1.5e-50 204.1 209 53.1
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 1.2e-49 201.1 284 40.8
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 1.8e-48 197.2 280 42.9
vmacro04083 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 7.5e-47 191.8 148 66.9
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 1.8e-45 187.2 181 51.4
Gohir.A09G108566 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.3e-43 181.0 162 57.4
BcaC01g01445 Brassica carinata HOM05D004500 ORTHO05D005775 7.2e-42 175.3 144 63.9
Thhalv10012226m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 7.0e-37 158.7 298 39.6
PSO339G2400 Papaver somniferum HOM05D004500 ORTHO05D005775 7.0e-37 158.7 289 37.7
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 7.8e-28 128.6 332 30.7
SEGI_21027 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 8.0e-25 118.6 138 47.1
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 1.9e-21 107.5 131 49.6
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 1.7e-19 100.9 75 62.7
SEGI_00784 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 3.9e-19 99.8 84 52.4
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 6.6e-19 99.0 307 31.3
HPP92_022828 Vanilla planifolia HOM05D004500 ORTHO05D005775 3.1e-16 90.1 80 61.2
EL10Ac5g12062 Beta vulgaris HOM05D004500 ORTHO05D005775 1.0e-11 75.1 60 58.3
TPR.G24491 Trifolium pratense HOM05D003400 ORTHO05D003687 1.2e-07 61.6 78 46.2
MD12G1083300 Malus domestica HOM05D004500 ORTHO05D005775 3.4e-07 60.1 85 48.2


User provided reference genes

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