Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 6.2e-152 540.8 281 100.0
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 4.6e-123 444.9 282 84.4
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 3.0e-122 442.2 282 82.6
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 3.9e-122 441.8 282 82.6
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.6e-120 436.4 281 81.9
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 1.5e-118 429.9 286 81.1
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 1.5e-118 429.9 286 80.8
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.1e-116 423.7 286 79.7
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 4.1e-79 298.9 237 67.9
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 4.5e-78 295.4 256 64.5
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 4.5e-78 295.4 242 65.3
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 7.7e-78 294.7 253 62.8
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 9.4e-76 287.7 267 65.5
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 9.4e-76 287.7 186 76.3
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 9.4e-76 287.7 286 58.4
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 2.1e-75 286.6 266 64.7
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 8.0e-75 284.6 281 63.0
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.8e-74 283.5 279 62.4
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 1.8e-74 283.5 281 62.6
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 3.0e-74 282.7 283 61.8
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.2e-73 280.8 279 61.6
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 2.0e-73 280.0 289 60.6
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 3.4e-73 279.3 281 61.6
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 4.4e-73 278.9 259 65.3
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 4.4e-73 278.9 268 60.8
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 9.8e-73 277.7 263 63.5
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 2.2e-72 276.6 265 62.3
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 3.7e-72 275.8 262 62.6
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 3.7e-72 275.8 271 62.4
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 3.7e-72 275.8 266 61.7
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 4.8e-72 275.4 194 74.2
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 8.3e-72 274.6 276 59.8
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 1.1e-71 274.2 276 60.1
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 4.1e-71 272.3 265 61.5
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 4.1e-71 272.3 257 60.3
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 5.4e-71 271.9 258 61.6
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 5.4e-71 271.9 227 63.9
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 7.0e-71 271.6 269 58.7
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 7.0e-71 271.6 261 60.9
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 7.0e-71 271.6 230 67.8
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 1.6e-70 270.4 265 60.8
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 1.6e-70 270.4 274 58.0
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 2.0e-70 270.0 264 59.8
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 2.0e-70 270.0 264 59.8
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 3.5e-70 269.2 265 60.0
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 3.5e-70 269.2 269 61.3
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 1.7e-69 266.9 202 69.8
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 1.7e-69 266.9 230 64.3
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 2.3e-69 266.5 217 65.9
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 2.3e-69 266.5 251 60.6
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 2.3e-69 266.5 283 56.9
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 8.6e-69 264.6 268 58.2
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 8.6e-69 264.6 259 60.6
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 8.6e-69 264.6 259 58.3
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 1.5e-68 263.8 263 61.2
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 1.5e-68 263.8 266 59.0
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.9e-68 263.5 267 58.1
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 3.2e-68 262.7 257 58.4
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 4.2e-68 262.3 255 58.4
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 7.2e-68 261.5 255 59.2
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 7.2e-68 261.5 261 60.2
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 7.2e-68 261.5 261 60.5
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 9.5e-68 261.2 193 71.0
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 1.2e-67 260.8 204 67.6
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 1.2e-67 260.8 204 67.6
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 1.6e-67 260.4 263 58.2
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 2.1e-67 260.0 197 69.5
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 2.1e-67 260.0 197 69.5
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 2.1e-67 260.0 260 58.1
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 3.6e-67 259.2 258 58.1
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 8.0e-67 258.1 255 58.0
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 8.0e-67 258.1 253 59.3
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 1.0e-66 257.7 262 56.9
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 1.4e-66 257.3 256 57.8
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 1.8e-66 256.9 269 57.2
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 2.3e-66 256.5 269 56.5
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 2.3e-66 256.5 269 56.9
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 8.9e-66 254.6 259 57.9
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 1.2e-65 254.2 269 56.5
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 1.2e-65 254.2 267 57.3
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 2.6e-65 253.1 259 57.5
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 3.4e-65 252.7 255 58.4
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 9.8e-65 251.1 198 65.7
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 9.8e-65 251.1 255 57.6
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 2.2e-64 250.0 255 56.5
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 2.8e-64 249.6 255 58.4
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 4.9e-64 248.8 208 62.0
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 1.1e-63 247.7 258 58.1
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 1.4e-63 247.3 174 74.7
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 2.4e-63 246.5 257 55.6
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 2.4e-63 246.5 257 55.6
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 3.1e-63 246.1 180 68.9
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 4.1e-63 245.7 213 62.0
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 4.5e-62 242.3 268 56.0
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 1.0e-61 241.1 249 55.0
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 5.0e-61 238.8 258 53.5
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 1.2e-59 234.2 201 62.2
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 2.1e-59 233.4 222 56.8
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 4.7e-59 232.3 199 60.8
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 6.1e-59 231.9 124 94.4
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 8.0e-59 231.5 225 59.6
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 2.0e-57 226.9 277 51.3
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 2.0e-57 226.9 256 53.5
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 2.6e-57 226.5 249 51.4
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 4.9e-56 222.2 249 50.6
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 2.7e-54 216.5 155 74.2
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 4.3e-52 209.1 175 60.0
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 6.2e-51 205.3 268 46.6
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.8e-50 203.8 142 73.2
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 1.5e-49 200.7 183 54.6
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 2.0e-46 190.3 204 55.4
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 8.1e-43 178.3 192 56.2
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 7.6e-25 118.6 85 80.0
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 1.1e-23 114.8 102 58.8
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 1.5e-20 104.4 141 46.8
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 2.6e-17 93.6 71 63.4
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 7.1e-15 85.5 99 51.5
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 8.7e-13 78.6 71 56.3
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-12 77.8 74 43.2
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 1.4e-07 61.2 113 38.9
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 7.1e-07 58.9 62 46.8
MBI13_g31543_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 7.9e-06 55.5 54 55.6


User provided reference genes

Program Settings