Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.1e-72 276.6 142 100.0
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 8.7e-70 266.9 142 95.8
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 7.9e-55 217.2 140 80.0
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.3e-52 209.9 142 77.5
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.3e-52 209.9 142 77.5
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 2.8e-52 208.8 142 78.2
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 2.8e-44 182.2 143 67.8
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 2.8e-44 182.2 139 73.4
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.1e-43 180.3 143 66.4
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 1.4e-43 179.9 142 69.0
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 9.1e-43 177.2 138 65.9
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 9.1e-43 177.2 138 65.9
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 9.1e-43 177.2 123 74.8
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.0e-42 176.0 105 83.8
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 3.4e-42 175.3 148 66.9
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 5.9e-42 174.5 142 66.2
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 7.7e-42 174.1 105 81.9
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 2.2e-41 172.6 143 66.4
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 3.8e-41 171.8 109 75.2
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 3.8e-41 171.8 106 79.2
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 3.8e-41 171.8 142 64.8
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 5.0e-41 171.4 115 72.2
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.4e-40 169.9 145 63.4
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.5e-40 169.1 145 64.8
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 3.2e-40 168.7 142 64.1
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 4.2e-40 168.3 148 65.5
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 7.2e-40 167.5 137 60.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 7.2e-40 167.5 116 66.4
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 9.4e-40 167.2 106 78.3
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 9.4e-40 167.2 106 81.1
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.6e-39 166.4 123 71.5
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 2.1e-39 166.0 129 67.4
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 2.1e-39 166.0 153 60.8
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 2.1e-39 166.0 105 78.1
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 2.7e-39 165.6 148 61.5
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.7e-39 165.6 106 77.4
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 2.7e-39 165.6 122 69.7
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 7.9e-39 164.1 130 65.4
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 7.9e-39 164.1 123 68.3
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.0e-38 163.7 121 69.4
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.8e-38 162.9 118 70.3
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 3.0e-38 162.2 114 68.4
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 3.9e-38 161.8 99 76.8
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 3.9e-38 161.8 117 70.1
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 3.9e-38 161.8 150 59.3
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 5.2e-38 161.4 116 65.5
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.1e-37 160.2 146 63.0
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.1e-37 160.2 104 76.9
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 2.0e-37 159.5 122 64.8
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 2.6e-37 159.1 95 76.8
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 2.6e-37 159.1 132 64.4
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 4.4e-37 158.3 121 66.9
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 4.4e-37 158.3 96 78.1
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 7.4e-37 157.5 94 81.9
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 2.2e-36 156.0 123 67.5
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 2.2e-36 156.0 108 69.4
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 3.7e-36 155.2 150 59.3
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 6.3e-36 154.5 98 75.5
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.1e-35 153.7 142 61.3
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.8e-35 152.9 108 71.3
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 1.8e-35 152.9 108 65.7
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 3.5e-34 148.7 132 58.3
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 4.5e-34 148.3 115 62.6
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 4.5e-34 148.3 107 68.2
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 5.9e-34 147.9 105 69.5
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 2.2e-33 146.0 107 69.2
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 5.0e-33 144.8 129 58.1
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 5.0e-33 144.8 100 70.0
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 6.5e-33 144.4 128 62.5
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 6.5e-33 144.4 111 64.0
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 6.5e-33 144.4 111 64.0
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 6.5e-33 144.4 162 50.0
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 6.5e-33 144.4 114 67.5
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 8.5e-33 144.1 98 70.4
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.5e-32 143.3 105 67.6
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.9e-32 142.9 107 66.4
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.2e-32 142.1 127 61.4
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 3.2e-32 142.1 98 69.4
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 3.2e-32 142.1 165 52.7
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 5.5e-32 141.4 99 66.7
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 7.2e-32 141.0 107 66.4
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 9.4e-32 140.6 107 63.6
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 4.7e-31 138.3 111 61.3
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 4.7e-31 138.3 121 56.2
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 8.0e-31 137.5 107 65.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 1.0e-30 137.1 107 64.5
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.4e-30 136.7 126 57.9
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 1.4e-30 136.7 97 68.0
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.8e-30 136.3 102 63.7
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.8e-30 136.3 122 58.2
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.8e-30 136.3 107 62.6
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 2.3e-30 136.0 143 53.8
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 4.0e-30 135.2 107 63.6
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 6.7e-30 134.4 93 66.7
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 6.7e-30 134.4 184 43.5
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 1.2e-29 133.7 105 61.0
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.2e-29 133.7 96 68.8
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 1.5e-29 133.3 93 66.7
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 1.5e-29 133.3 93 66.7
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 2.6e-29 132.5 108 56.5
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 5.7e-29 131.3 93 64.5
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 9.7e-29 130.6 92 68.5
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 2.7e-26 122.5 120 54.2
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.9e-25 119.0 117 57.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.9e-25 119.0 73 78.1
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 7.2e-24 114.4 81 70.4
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 2.1e-23 112.8 110 57.3
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.8e-22 109.8 186 38.7
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 4.4e-21 105.1 55 90.9
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 1.7e-20 103.2 61 78.7
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 6.3e-20 101.3 62 80.6
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 4.1e-19 98.6 108 55.6
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 2.0e-18 96.3 102 48.0
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 5.9e-18 94.7 102 46.1
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 6.1e-15 84.7 116 34.5
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 3.0e-14 82.4 87 42.5
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.0e-14 82.0 74 59.5
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 3.4e-13 79.0 96 40.6
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.0e-10 69.7 42 73.8
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 5.9e-10 68.2 95 38.9
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 6.1e-07 58.2 92 43.5
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 1.0e-06 57.4 96 32.3


User provided reference genes

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