Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 1.9e-113 412.5 209 100.0
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 1.0e-71 273.9 166 82.5
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 3.7e-69 265.4 166 83.7
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 2.4e-68 262.7 165 81.2
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 8.0e-64 247.7 165 78.8
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 8.9e-63 244.2 191 71.2
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 4.0e-55 218.8 164 68.3
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 9.9e-54 214.2 169 66.9
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 3.7e-53 212.2 157 72.0
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 3.7e-53 212.2 157 72.0
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 3.2e-52 209.1 164 66.5
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 7.1e-52 208.0 160 68.1
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 1.2e-51 207.2 167 65.9
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 3.5e-51 205.7 163 63.8
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 6.0e-51 204.9 161 64.6
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 1.7e-50 203.4 165 63.0
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 3.9e-50 202.2 165 60.6
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 5.1e-50 201.8 148 71.6
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 5.1e-50 201.8 164 61.6
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 2.5e-49 199.5 154 63.6
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 3.3e-49 199.1 161 65.8
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 5.6e-49 198.4 161 62.1
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 7.3e-49 198.0 169 66.9
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 1.2e-48 197.2 167 65.3
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 1.2e-48 197.2 161 62.7
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 2.1e-48 196.4 161 62.1
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 2.8e-48 196.1 165 59.4
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 6.2e-48 194.9 150 65.3
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 3.1e-47 192.6 161 62.7
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 3.1e-47 192.6 160 62.5
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 4.0e-47 192.2 150 64.7
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 5.2e-47 191.8 165 59.4
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 5.2e-47 191.8 165 59.4
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 5.2e-47 191.8 161 60.9
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 8.9e-47 191.0 158 62.7
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 1.5e-46 190.3 165 60.0
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 2.6e-46 189.5 169 60.9
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 2.6e-46 189.5 164 62.8
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 3.4e-46 189.1 162 63.0
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 4.4e-46 188.7 163 62.6
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 7.6e-46 188.0 175 57.7
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 9.9e-46 187.6 165 60.6
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 9.9e-46 187.6 166 59.6
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 1.3e-45 187.2 165 58.8
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 2.9e-45 186.0 164 59.8
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 3.8e-45 185.7 160 60.0
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 4.9e-45 185.3 170 61.2
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 6.4e-45 184.9 168 60.7
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 6.4e-45 184.9 166 59.6
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 6.4e-45 184.9 165 60.0
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 1.9e-44 183.3 148 62.8
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 3.2e-44 182.6 169 56.8
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 4.2e-44 182.2 165 57.0
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 4.2e-44 182.2 167 56.3
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 5.4e-44 181.8 145 60.7
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 3.5e-43 179.1 168 60.7
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 3.5e-43 179.1 166 57.8
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 7.8e-43 177.9 161 59.6
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 1.0e-42 177.6 174 58.0
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 1.3e-42 177.2 168 55.4
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 5.1e-42 175.3 170 58.8
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 5.1e-42 175.3 165 54.5
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 5.1e-42 175.3 160 56.9
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 3.3e-41 172.6 165 55.8
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 3.3e-41 172.6 158 57.0
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 3.3e-41 172.6 156 59.6
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 7.3e-41 171.4 165 53.9
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 1.6e-40 170.2 165 55.2
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 2.1e-40 169.9 158 57.6
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 4.8e-40 168.7 162 55.6
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 2.4e-39 166.4 166 52.4
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 3.4e-38 162.5 158 54.4
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 3.4e-38 162.5 154 54.5
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 5.8e-38 161.8 142 56.3
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 5.8e-38 161.8 161 52.8
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 7.6e-38 161.4 146 54.8
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 1.3e-37 160.6 161 52.8
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 1.7e-37 160.2 178 53.4
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 3.8e-37 159.1 164 53.7
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 1.2e-35 154.1 119 70.6
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 4.6e-35 152.1 172 54.7
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 6.0e-35 151.8 167 50.3
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 9.6e-33 144.4 161 52.2
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 1.3e-32 144.1 146 53.4
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 4.8e-32 142.1 140 54.3
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 4.8e-32 142.1 127 57.5
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 4.8e-32 142.1 150 53.3
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 4.0e-31 139.0 111 63.1
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 8.4e-29 131.3 114 56.1
A08p22530 Brassica napus HOM05D001349 ORTHO05D008727 8.7e-26 121.3 111 63.1
C03p79670 Brassica napus HOM05D001349 ORTHO05D008727 3.3e-25 119.4 106 64.2
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 1.6e-24 117.1 166 43.4
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 2.1e-24 116.7 140 46.4
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 4.0e-23 112.5 149 43.0
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 6.9e-23 111.7 173 37.6
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 2.6e-22 109.8 85 60.0
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 1.7e-21 107.1 85 62.4
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 4.2e-20 102.4 78 62.8
vmacro17948 Vaccinium macrocarpon HOM05D007198 ORTHO05D008969 1.6e-19 100.5 80 67.5
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 3.5e-19 99.4 78 60.3
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 2.3e-18 96.7 153 40.5
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 2.1e-16 90.1 65 69.2
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 3.1e-15 86.3 79 62.0
MD17G1282900 Malus domestica HOM05D007198 ORTHO05D008969 2.9e-13 79.7 69 55.1
Ah.03g144920 Amaranthus hybridus HOM05D007198 ORTHO05D008969 5.5e-12 75.5 81 49.4
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 8.7e-10 68.2 86 40.7
Cre01.g037900 Chlamydomonas reinhardtii HOM05D007198 ORTHO05D008969 1.1e-07 61.2 175 28.0
RcHm_v2.0_Chr3g0472951 Rosa chinensis HOM05D007198 ORTHO05D008969 2.6e-06 56.6 59 50.8


User provided reference genes

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