Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.2e-69 265.4 122 100.0
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.1e-64 248.8 122 91.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 2.6e-46 188.7 123 77.2
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 2.4e-44 182.2 123 73.2
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 9.5e-41 170.2 122 71.3
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 5.2e-39 164.5 122 68.9
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 6.8e-39 164.1 122 64.8
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 4.9e-37 157.9 112 67.9
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 1.1e-36 156.8 128 60.9
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 4.1e-36 154.8 79 83.5
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 9.2e-36 153.7 80 82.5
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 9.2e-36 153.7 89 78.7
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 9.2e-36 153.7 134 56.7
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 9.2e-36 153.7 94 72.3
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.1e-35 152.5 76 88.2
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 2.1e-35 152.5 76 88.2
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 2.7e-35 152.1 84 79.8
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 4.6e-35 151.4 123 61.8
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 4.6e-35 151.4 84 79.8
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 4.6e-35 151.4 76 86.8
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 6.0e-35 151.0 103 68.9
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 6.0e-35 151.0 103 68.9
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 7.8e-35 150.6 122 59.8
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 7.8e-35 150.6 104 70.2
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.3e-34 149.8 91 75.8
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 1.3e-34 149.8 77 84.4
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 2.3e-34 149.1 82 82.9
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 2.3e-34 149.1 103 68.0
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 2.3e-34 149.1 105 64.8
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 3.9e-34 148.3 84 77.4
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 8.6e-34 147.1 77 84.4
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.1e-33 146.7 82 76.8
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.5e-33 146.4 112 61.6
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.9e-33 146.0 77 83.1
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.9e-33 146.0 113 64.6
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.9e-33 146.0 114 62.3
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 2.5e-33 145.6 77 83.1
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.3e-33 145.2 113 64.6
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 3.3e-33 145.2 113 64.6
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 5.6e-33 144.4 77 81.8
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 7.3e-33 144.1 77 79.2
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.6e-32 142.9 82 73.2
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 2.8e-32 142.1 77 79.2
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 3.1e-31 138.7 96 67.7
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 5.2e-31 137.9 112 61.6
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.5e-30 136.3 84 72.6
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.0e-30 136.0 61 93.4
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.0e-30 136.0 61 93.4
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 4.4e-30 134.8 62 90.3
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 4.4e-30 134.8 62 90.3
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 4.4e-30 134.8 80 77.5
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 3.8e-29 131.7 80 76.2
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 8.4e-29 130.6 95 64.2
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 3.2e-28 128.6 80 73.8
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 1.6e-27 126.3 94 64.9
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 3.5e-27 125.2 80 68.8
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 2.3e-26 122.5 107 57.9
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 3.9e-26 121.7 122 53.3
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.9e-25 119.4 122 51.6
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 2.5e-25 119.0 111 54.1
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.4e-23 113.2 124 54.8
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 3.1e-23 112.1 122 50.8
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 2.6e-22 109.0 52 86.5
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 4.4e-22 108.2 76 65.8
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 7.6e-22 107.5 80 66.2
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.3e-21 106.7 127 51.2
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 2.2e-21 105.9 120 50.8
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 1.2e-19 100.1 84 59.5
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.6e-19 99.8 111 51.4
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.1e-19 99.4 61 70.5
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 2.1e-19 99.4 79 60.8
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 2.7e-19 99.0 107 52.3
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 3.5e-19 98.6 45 93.3
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 1.0e-18 97.1 52 80.8
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 3.9e-18 95.1 46 89.1
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 7.3e-17 90.9 85 56.5
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.4e-15 86.7 92 48.9
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 9.0e-15 84.0 61 62.3
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.0e-14 82.8 48 72.9
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 5.8e-14 81.3 48 70.8
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 8.4e-13 77.4 86 47.7
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 4.8e-08 61.6 30 83.3


User provided reference genes

Program Settings