Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.3e-102 374.4 195 100.0
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 8.8e-97 357.1 195 96.9
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 2.8e-87 325.5 195 89.7
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.9e-83 312.8 195 86.2
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.5e-83 312.4 195 85.6
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.4e-81 306.6 198 86.9
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 2.2e-79 299.3 195 83.6
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 1.4e-70 270.0 199 77.4
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.2e-69 266.9 199 76.9
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 9.5e-67 257.3 203 74.9
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 3.6e-66 255.4 203 74.4
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.0e-65 251.9 198 73.7
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.1e-62 243.8 198 71.7
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 2.7e-61 239.2 200 70.5
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.9e-61 238.0 179 74.3
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.3e-60 236.9 198 71.2
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 1.7e-60 236.5 200 70.5
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 3.0e-60 235.7 203 69.5
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 3.9e-60 235.3 195 69.7
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 5.0e-60 235.0 173 75.7
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 8.6e-60 234.2 199 69.3
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.1e-59 233.8 196 68.4
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 2.5e-59 232.6 197 67.0
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.5e-59 232.6 196 67.9
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 5.6e-59 231.5 200 67.5
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 5.6e-59 231.5 205 69.3
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 1.2e-58 230.3 199 67.8
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.2e-58 230.3 182 72.5
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.6e-58 229.9 199 68.3
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 4.7e-58 228.4 196 67.9
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.1e-57 227.3 162 74.7
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-57 227.3 197 67.0
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-57 227.3 197 67.0
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 1.1e-57 227.3 198 66.2
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 1.4e-57 226.9 184 72.8
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.4e-57 226.9 195 67.2
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.4e-57 226.9 198 68.2
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.4e-57 226.9 192 67.7
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.8e-57 226.5 200 67.0
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.8e-57 226.5 198 66.2
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.8e-57 226.5 199 67.3
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 3.1e-57 225.7 172 75.6
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 5.2e-57 224.9 155 78.7
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 6.8e-57 224.6 171 71.9
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 6.8e-57 224.6 195 66.2
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 6.8e-57 224.6 173 76.3
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 6.8e-57 224.6 198 67.7
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 8.9e-57 224.2 170 74.7
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.5e-56 223.4 139 82.0
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 2.0e-56 223.0 198 65.7
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 2.6e-56 222.6 139 84.9
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 4.4e-56 221.9 141 84.4
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 4.4e-56 221.9 194 66.0
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 7.5e-56 221.1 197 66.0
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-55 220.3 143 80.4
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.7e-55 219.9 167 74.3
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.7e-55 219.9 171 71.3
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 2.2e-55 219.5 195 65.6
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.2e-55 219.5 139 80.6
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 2.2e-55 219.5 171 71.9
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.2e-55 219.5 138 81.2
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.2e-55 219.5 144 81.9
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 2.9e-55 219.2 138 81.2
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.7e-55 218.8 174 69.0
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 3.7e-55 218.8 173 71.1
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.7e-55 218.8 195 66.2
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.7e-55 218.8 195 66.2
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 4.9e-55 218.4 172 72.1
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 4.9e-55 218.4 137 84.7
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 8.3e-55 217.6 168 72.0
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 8.3e-55 217.6 173 71.1
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.4e-54 216.9 195 65.1
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.4e-54 216.9 141 83.0
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.9e-54 216.5 150 80.0
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.9e-54 216.5 161 75.8
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.4e-54 216.1 139 80.6
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 2.4e-54 216.1 139 82.0
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.4e-54 216.1 139 82.0
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.2e-54 215.7 195 68.2
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 3.2e-54 215.7 183 65.6
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 4.1e-54 215.3 174 70.1
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 4.1e-54 215.3 176 68.2
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 7.0e-54 214.5 170 70.6
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 7.0e-54 214.5 172 70.3
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 9.2e-54 214.2 143 78.3
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 9.2e-54 214.2 195 64.6
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.2e-53 213.8 138 79.0
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.6e-53 213.4 138 80.4
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.7e-53 212.6 174 69.0
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 3.5e-53 212.2 145 77.9
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 3.5e-53 212.2 145 77.9
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 3.5e-53 212.2 145 77.9
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 3.5e-53 212.2 145 77.9
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 4.6e-53 211.8 144 77.8
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 6.0e-53 211.5 148 75.7
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 6.0e-53 211.5 174 69.0
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 7.8e-53 211.1 138 79.7
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 7.8e-53 211.1 138 79.7
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 7.8e-53 211.1 146 77.4
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.0e-52 210.7 180 68.3
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.3e-52 210.3 174 69.0
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.3e-52 210.3 195 63.6
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.3e-52 209.5 195 61.0
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.0e-52 209.1 195 63.1
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 3.0e-52 209.1 195 63.1
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 3.0e-52 209.1 137 80.3
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 3.0e-52 209.1 170 68.2
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 5.0e-52 208.4 197 64.0
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 8.6e-52 207.6 176 64.2
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 1.1e-51 207.2 180 67.8
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.5e-51 206.8 142 76.8
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 2.5e-51 206.1 197 62.4
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 3.3e-51 205.7 173 66.5
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 4.3e-51 205.3 199 64.3
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 9.5e-51 204.1 172 68.6
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 9.5e-51 204.1 170 67.6
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 1.6e-50 203.4 181 66.3
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 2.8e-50 202.6 139 77.7
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.8e-50 202.6 176 65.9
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 3.6e-50 202.2 171 67.8
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.4e-49 200.3 115 89.6
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 2.3e-49 199.5 113 92.0
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 2.3e-49 199.5 140 75.7
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 3.1e-49 199.1 138 76.8
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.6e-48 196.1 115 87.8
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.6e-48 196.1 115 87.8
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 9.9e-48 194.1 140 75.7
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 9.9e-48 194.1 112 90.2
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-47 193.7 113 88.5
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-47 193.4 113 87.6
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.2e-47 193.0 199 59.3
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 8.3e-47 191.0 181 61.9
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.9e-46 189.9 145 66.9
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.6e-45 186.8 180 62.8
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 2.7e-45 186.0 197 60.4
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.3e-44 183.7 198 57.6
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 6.6e-44 181.4 173 61.3
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 6.6e-44 181.4 165 65.5
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.5e-43 179.5 144 64.6
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.6e-43 178.3 139 66.2
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-42 177.2 139 66.2
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 2.1e-42 176.4 109 79.8
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.4e-41 173.7 195 54.4
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.8e-41 173.3 170 58.2
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.8e-41 173.3 111 82.0
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.1e-41 172.6 195 53.8
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.9e-39 166.0 174 58.6
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 2.9e-39 166.0 349 38.4
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 4.9e-39 165.2 132 72.7
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 9.2e-38 161.0 111 72.1
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 4.6e-37 158.7 113 70.8
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 2.3e-36 156.4 168 59.5
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 1.5e-35 153.7 140 64.3
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 4.0e-33 145.6 120 62.5
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.3e-28 129.8 131 62.6
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 3.6e-26 122.5 107 57.0
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 2.6e-24 116.3 132 47.0
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 8.4e-23 111.3 91 67.0
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.9e-22 110.2 95 67.4
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 3.2e-22 109.4 94 63.8
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 5.4e-22 108.6 93 65.6
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 2.1e-21 106.7 87 69.0
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 1.3e-20 104.0 87 67.8
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 1.3e-20 104.0 87 67.8
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.0e-20 102.8 127 52.8
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 2.0e-16 90.1 87 57.5
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.2e-13 80.9 47 87.2
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 2.7e-13 79.7 44 93.2
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 6.0e-13 78.6 49 81.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 2.6e-08 63.2 38 81.6


User provided reference genes

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