Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002011g0090 Nicotiana tabacum HOM05D003524 ORTHO05D003988 5.8e-39 163.7 80 100.0
Nitab4.5_0003563g0040 Nicotiana tabacum HOM05D003524 ORTHO05D003988 2.8e-25 118.2 61 93.4
CAN.G353.10 Capsicum annuum HOM05D003524 ORTHO05D003988 3.2e-13 78.2 70 62.9
Oeu009646.1 Olea europaea HOM05D003524 ORTHO05D003988 8.8e-11 70.1 59 52.5
SGA_v2.0_scaffold22G09905 Striga asiatica HOM05D003524 ORTHO05D003988 8.8e-11 70.1 60 45.0
unitig_748.g7378 Utricularia gibba HOM05D003524 ORTHO05D003988 2.0e-10 68.9 60 46.7
Migut.A00356 Erythranthe guttata HOM05D003524 ORTHO05D003988 3.3e-10 68.2 60 48.3
Thhalv10026655m.g Eutrema salsugineum HOM05D003524 ORTHO05D003988 4.4e-10 67.8 59 49.2
Sp7g29640 Schrenkiella parvula HOM05D003524 ORTHO05D003988 4.4e-10 67.8 59 49.2
BcaC01g01054 Brassica carinata HOM05D003524 ORTHO05D003988 5.7e-10 67.4 59 50.8
BcaC01g01055 Brassica carinata HOM05D003524 ORTHO05D003988 5.7e-10 67.4 59 50.8
A08p18430 Brassica napus HOM05D003524 ORTHO05D003988 5.7e-10 67.4 59 50.8
C03p87500 Brassica napus HOM05D003524 ORTHO05D003988 5.7e-10 67.4 59 50.8
BolC3t21069H Brassica oleracea HOM05D003524 ORTHO05D003988 5.7e-10 67.4 59 50.8
Haze_21415 Corylus avellana HOM05D003524 ORTHO05D003988 7.5e-10 67.0 60 45.0
Aa31LG2G18400 Aethionema arabicum HOM05D003524 ORTHO05D003988 9.7e-10 66.6 59 50.8
BcaB03g12722 Brassica carinata HOM05D003524 ORTHO05D003988 9.7e-10 66.6 59 49.2
A01p06450 Brassica napus HOM05D003524 ORTHO05D003988 9.7e-10 66.6 59 49.2
C01p07090 Brassica napus HOM05D003524 ORTHO05D003988 9.7e-10 66.6 59 49.2
BolC1t00701H Brassica oleracea HOM05D003524 ORTHO05D003988 9.7e-10 66.6 59 49.2
BraA01t00606Z Brassica rapa HOM05D003524 ORTHO05D003988 9.7e-10 66.6 59 49.2
Haze_21413 Corylus avellana HOM05D003524 ORTHO05D003988 9.7e-10 66.6 59 45.8
Rhsim02G0212800 Rhododendron simsii HOM05D003524 ORTHO05D003988 9.7e-10 66.6 60 51.7
BcaNung03115 Brassica carinata HOM05D003524 ORTHO05D003988 1.3e-09 66.2 59 49.2
AL7G20150 Arabidopsis lyrata HOM05D003524 ORTHO05D003988 2.2e-09 65.5 59 50.8
AT4G31830 Arabidopsis thaliana HOM05D003524 ORTHO05D003988 2.2e-09 65.5 59 50.8
DCAR_022861 Daucus carota HOM05D003524 ORTHO05D003988 2.8e-09 65.1 68 45.6
arahy.Tifrunner.gnm1.ann1.PTAL7S Arachis hypogaea HOM05D003524 ORTHO05D003988 3.7e-09 64.7 59 45.8
arahy.Tifrunner.gnm1.ann1.ZW8IXI Arachis hypogaea HOM05D003524 ORTHO05D003988 3.7e-09 64.7 59 45.8
CARHR239750 Cardamine hirsuta HOM05D003524 ORTHO05D003988 3.7e-09 64.7 59 50.8
TAR625G1231 Trochodendron aralioides HOM05D003524 ORTHO05D003988 3.7e-09 64.7 60 45.0
Carub.0007s0872 Capsella rubella HOM05D003524 ORTHO05D003988 4.8e-09 64.3 59 49.2
Cfa013050 Carpinus fangiana HOM05D003524 ORTHO05D003988 4.8e-09 64.3 60 43.3
Actinidia22287 Actinidia chinensis HOM05D000091 ORTHO05D003988 6.3e-09 63.9 64 48.4
CSS0001588 Camellia sinensis var. sinensis HOM05D003524 ORTHO05D003988 8.2e-09 63.5 59 47.5
BcaC09g51975 Brassica carinata HOM05D003524 ORTHO05D003988 1.1e-08 63.2 58 46.6
ClCG05G016230 Citrullus lanatus HOM05D003524 ORTHO05D003988 1.1e-08 63.2 60 46.7
MELO3C016955.2 Cucumis melo HOM05D003524 ORTHO05D003988 1.1e-08 63.2 60 45.0
PGR044G0872 Punica granatum HOM05D003524 ORTHO05D003988 1.1e-08 63.2 59 45.8
CANSAT25G3000 Cannabis sativa HOM05D003524 ORTHO05D003988 1.4e-08 62.8 60 43.3
TWI34G0563 Tripterygium wilfordii HOM05D003524 ORTHO05D003988 1.8e-08 62.4 59 45.8
BraA08t33803Z Brassica rapa HOM05D003524 ORTHO05D003988 2.4e-08 62.0 56 48.2
QL02p018819 Quercus lobata HOM05D003524 ORTHO05D003988 4.1e-08 61.2 59 44.1
THA.LOC104803862 Tarenaya hassleriana HOM05D003524 ORTHO05D003988 4.1e-08 61.2 59 44.1
Atru.chr7.2561 Acer truncatum HOM05D003524 ORTHO05D003988 7.0e-08 60.5 60 43.3
Lj1g0009607 Lotus japonicus HOM05D003524 ORTHO05D003988 7.0e-08 60.5 61 41.0
Lj5g0020130 Lotus japonicus HOM05D003524 ORTHO05D003988 7.0e-08 60.5 61 41.0
Phvul.001G041500 Phaseolus vulgaris HOM05D003524 ORTHO05D003988 7.0e-08 60.5 60 41.7
SalBow4G2912 Salvia bowleyana HOM05D003524 ORTHO05D003988 7.0e-08 60.5 60 40.0
CiPaw.07G230500 Carya illinoinensis HOM05D003524 ORTHO05D003988 9.1e-08 60.1 60 43.3
Cc08_g07080 Coffea canephora HOM05D003524 ORTHO05D003988 9.1e-08 60.1 59 44.1
Cc08_g07090 Coffea canephora HOM05D003524 ORTHO05D003988 9.1e-08 60.1 59 44.1
Nn8g39910 Nelumbo nucifera HOM05D003524 ORTHO05D003988 9.1e-08 60.1 60 46.7
CsaV3_4G036500 Cucumis sativus L. HOM05D003524 ORTHO05D003988 1.2e-07 59.7 60 45.0
Lj5g0009668 Lotus japonicus HOM05D003524 ORTHO05D003988 1.2e-07 59.7 61 41.0
TAR383G0003 Trochodendron aralioides HOM05D003524 ORTHO05D003988 1.2e-07 59.7 60 45.0
Aqoxy7G03391 Aquilegia oxysepala HOM05D003524 ORTHO05D003988 2.0e-07 58.9 60 38.3
Glyma.14G101900 Glycine max HOM05D003524 ORTHO05D003988 2.0e-07 58.9 61 36.1
Cc08_g07120 Coffea canephora HOM05D003524 ORTHO05D003988 2.7e-07 58.5 60 43.3
Eucgr.L02917 Eucalyptus grandis HOM05D003524 ORTHO05D003988 2.7e-07 58.5 60 41.7
Nitab4.5_0002011g0040 Nicotiana tabacum HOM05D003524 ORTHO05D003988 2.7e-07 58.5 60 46.7
CAN.G353.11 Capsicum annuum HOM05D003524 ORTHO05D003988 3.5e-07 58.2 59 44.1
Eucgr.C02607 Eucalyptus grandis HOM05D003524 ORTHO05D003988 3.5e-07 58.2 60 41.7
GSVIVG01035971001 Vitis vinifera HOM05D003524 ORTHO05D003988 7.7e-07 57.0 59 42.4
Psat6g025880 Pisum sativum HOM05D003524 ORTHO05D003988 1.0e-06 56.6 57 40.4
ECA232G2703 Erigeron canadensis HOM05D003524 ORTHO05D003988 1.3e-06 56.2 59 42.4
PSO339G2253 Papaver somniferum HOM05D003524 ORTHO05D003988 1.3e-06 56.2 60 40.0
PGSC0003DMG400026298 Solanum tuberosum HOM05D003524 ORTHO05D003988 1.3e-06 56.2 59 42.4
Peaxi162Scf00045g02028 Petunia axillaris HOM05D003524 ORTHO05D003988 1.7e-06 55.8 59 42.4
Glyma.17G223300 Glycine max HOM05D003524 ORTHO05D003988 2.2e-06 55.5 57 36.8
TPR.G38873 Trifolium pratense HOM05D003524 ORTHO05D003988 2.2e-06 55.5 57 40.4
Migut.K00320 Erythranthe guttata HOM05D003524 ORTHO05D003988 3.8e-06 54.7 58 44.8
HanXRQChr09g0274741 Helianthus annuus HOM05D003524 ORTHO05D003988 3.8e-06 54.7 64 40.6
Lsat_1_v5_gn_4_88160 Lactuca sativa HOM05D003361 ORTHO05D003988 5.0e-06 54.3 68 38.2
Sopen08g002750 Solanum pennellii HOM05D003524 ORTHO05D003988 5.0e-06 54.3 59 40.7
Solyc08g006800.3 Solanum lycopersicum HOM05D003524 ORTHO05D003988 6.5e-06 53.9 59 42.4
Sopen07g001680 Solanum pennellii HOM05D003524 ORTHO05D003988 6.5e-06 53.9 58 39.7
MD15G1040800 Malus domestica HOM05D003524 ORTHO05D003988 8.5e-06 53.5 60 41.7


User provided reference genes

Program Settings