Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002008g0080 Nicotiana tabacum HOM05D010714 ORTHO05D000006 2.8e-51 204.9 97 100.0
Nitab4.5_0000268g0110 Nicotiana tabacum HOM05D010714 ORTHO05D000006 1.7e-16 89.4 92 51.1
Nitab4.5_0000400g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.2e-15 85.1 80 55.0
Nitab4.5_0009570g0030 Nicotiana tabacum HOM05D010714 ORTHO05D000006 7.1e-15 84.0 166 33.7
Nitab4.5_0004062g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.8e-13 79.3 56 64.3
Nitab4.5_0000012g0330 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.9e-12 75.9 42 83.3
Nitab4.5_0000017g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.5e-12 75.5 59 61.0
Nitab4.5_0013534g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.3e-12 75.1 56 60.7
Nitab4.5_0000857g0090 Nicotiana tabacum HOM05D010714 ORTHO05D000007 4.3e-12 74.7 59 61.0
Nitab4.5_0000992g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 4.3e-12 74.7 56 60.7
Nitab4.5_0001926g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 2.8e-11 72.0 59 57.6
Nitab4.5_0001175g0190 Nicotiana tabacum HOM05D000003 ORTHO05D000283 5.3e-10 67.8 55 54.5
Nitab4.5_0000344g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.4e-09 65.1 54 57.4
Nitab4.5_0001345g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.4e-09 65.1 40 75.0
Nitab4.5_0004586g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 7.6e-09 63.9 48 60.4
Nitab4.5_0000087g0190 Nicotiana tabacum HOM05D010714 ORTHO05D000007 1.3e-08 63.2 50 62.0
Nitab4.5_0008412g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.3e-08 63.2 97 41.2
Nitab4.5_0004986g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.7e-08 62.8 56 57.1
Nitab4.5_0000113g0230 Nicotiana tabacum HOM05D000003 ORTHO05D000006 2.2e-08 62.4 56 51.8
Nitab4.5_0000098g0170 Nicotiana tabacum HOM05D023962 ORTHO05D000006 2.9e-08 62.0 53 50.9
Nitab4.5_0000060g0070 Nicotiana tabacum HOM05D023962 ORTHO05D000006 3.8e-08 61.6 52 51.9
Nitab4.5_0001920g0080 Nicotiana tabacum HOM05D010714 ORTHO05D000006 3.8e-08 61.6 57 49.1
EL10Ac4g07968 Beta vulgaris HOM05D000003 ORTHO05D000006 5.0e-08 61.2 87 35.6
Nitab4.5_0000538g0170 Nicotiana tabacum HOM05D021330 ORTHO05D000006 5.0e-08 61.2 56 53.6
Nitab4.5_0001411g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.5e-08 60.8 40 67.5
Nitab4.5_0000985g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.4e-07 59.7 55 52.7
Nitab4.5_0000197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.9e-07 59.3 52 55.8
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 3.2e-07 58.5 55 43.6
EL10Ac4g07963 Beta vulgaris HOM05D000003 ORTHO05D000006 3.2e-07 58.5 55 43.6
Nitab4.5_0000044g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.5e-07 57.8 48 54.2
Nitab4.5_0000064g0120 Nicotiana tabacum HOM05D041081 ORTHO05D000006 5.5e-07 57.8 56 46.4
Psat0s1357g0040 Pisum sativum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 55 49.1
Psat2g089560 Pisum sativum HOM05D000003 ORTHO05D000004 1.2e-06 56.6 55 49.1
Psat2g100080 Pisum sativum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 55 49.1
Psat5g282240 Pisum sativum HOM05D000003 ORTHO05D000004 1.2e-06 56.6 55 49.1
AUR62015316 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.6e-06 56.2 54 44.4
Psat4g187720 Pisum sativum HOM05D000003 ORTHO05D000006 1.6e-06 56.2 55 49.1
Sopen00g004900 Solanum pennellii HOM05D000003 ORTHO05D000006 1.6e-06 56.2 81 39.5
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-06 56.2 81 37.0
Peaxi162Scf00112g01218 Petunia axillaris HOM05D037098 ORTHO05D000007 2.1e-06 55.8 59 44.1
Nitab4.5_0000175g0270 Nicotiana tabacum HOM05D010714 ORTHO05D000006 2.7e-06 55.5 53 50.9
Sabra15G0091800 Salix brachista HOM05D000003 ORTHO05D000007 2.7e-06 55.5 60 38.3
Sopen00g004530 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-06 55.5 81 35.8
EL10Ac4g09271 Beta vulgaris HOM05D000003 ORTHO05D000006 3.6e-06 55.1 55 45.5
Nitab4.5_0001811g0040 Nicotiana tabacum HOM05D036377 ORTHO05D000006 3.6e-06 55.1 49 51.0
Sopen00g004600 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-06 55.1 81 38.3
Sopen00g013580 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-06 54.7 56 44.6
Nitab4.5_0002525g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000006 6.1e-06 54.3 55 43.6
Nitab4.5_0006092g0010 Nicotiana tabacum HOM05D010714 ORTHO05D000006 6.1e-06 54.3 32 65.6
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 6.1e-06 54.3 81 39.5
EL10Ac2g03381 Beta vulgaris HOM05D000003 ORTHO05D000006 7.9e-06 53.9 80 33.8
Sopen00g008000 Solanum pennellii HOM05D000003 ORTHO05D000004 7.9e-06 53.9 81 38.3


User provided reference genes

Program Settings