Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002007g0090 Nicotiana tabacum HOM05D002238 ORTHO05D007272 6.4e-76 287.3 145 100.0
Nitab4.5_0009247g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.2e-58 229.9 212 62.3
Nitab4.5_0009119g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.4e-53 211.8 205 59.0
Peaxi162Scf00327g00039 Petunia axillaris HOM05D002238 ORTHO05D007272 1.7e-52 209.5 209 55.5
Nitab4.5_0004440g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 4.9e-52 208.0 212 55.7
Peaxi162Scf00002g00372 Petunia axillaris HOM05D002238 ORTHO05D003453 4.1e-51 204.9 211 55.0
Nitab4.5_0017994g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 7.1e-51 204.1 196 60.2
Peaxi162Scf00108g00056 Petunia axillaris HOM05D002238 ORTHO05D007272 2.1e-50 202.6 173 63.6
PGSC0003DMG400020787 Solanum tuberosum HOM05D002238 ORTHO05D007272 1.0e-49 200.3 212 53.3
Peaxi162Scf00108g00063 Petunia axillaris HOM05D002238 ORTHO05D007272 5.1e-49 198.0 211 54.0
Peaxi162Scf00365g00022 Petunia axillaris HOM05D002238 ORTHO05D007272 5.2e-46 188.0 211 52.6
Sopen08g016790 Solanum pennellii HOM05D002238 ORTHO05D007272 5.2e-46 188.0 212 50.5
Nitab4.5_0011591g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.0e-45 186.0 99 93.9
Solyc08g061450.3 Solanum lycopersicum HOM05D002238 ORTHO05D007272 9.9e-45 183.7 212 49.5
Peaxi162Scf00108g00048 Petunia axillaris HOM05D002238 ORTHO05D007272 8.4e-44 180.6 169 60.4
Nitab4.5_0002007g0110 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.1e-43 180.3 99 90.9
Nitab4.5_0013543g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.4e-43 179.1 99 90.9
Peaxi162Scf00015g02010 Petunia axillaris HOM05D002238 ORTHO05D004044 2.5e-40 169.1 96 86.5
Cc08_g00970 Coffea canephora HOM05D002238 ORTHO05D007272 1.5e-37 159.8 212 43.4
Oeu034743.2 Olea europaea HOM05D002238 ORTHO05D007272 3.0e-33 145.6 213 42.7
Migut.A00055 Erythranthe guttata HOM05D002238 ORTHO05D007272 4.3e-32 141.7 211 40.3
CSS0032500 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D007272 2.4e-30 136.0 106 61.3
Dinv30168 Davidia involucrata HOM05D002238 ORTHO05D007272 2.4e-30 136.0 115 65.2
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 1.5e-29 133.3 214 42.5
Lj8C25T21 Lonicera japonica HOM05D002238 ORTHO05D007272 2.0e-29 132.9 182 45.6
DCAR_006233 Daucus carota HOM05D002238 ORTHO05D007272 4.5e-29 131.7 115 59.1
Haze_00046 Corylus avellana HOM05D002238 ORTHO05D007272 7.6e-29 131.0 214 42.1
Rhsim02G0195500 Rhododendron simsii HOM05D002238 ORTHO05D007272 7.6e-29 131.0 105 60.0
QL09p012798 Quercus lobata HOM05D002238 ORTHO05D007272 1.7e-28 129.8 215 41.9
Rhsim02G0198300 Rhododendron simsii HOM05D002238 ORTHO05D007272 6.4e-28 127.9 105 58.1
ECA233G3411 Erigeron canadensis HOM05D002238 ORTHO05D007272 1.1e-27 127.1 104 59.6
Rhsim09G0014000 Rhododendron simsii HOM05D002238 ORTHO05D007272 1.1e-27 127.1 105 58.1
Duzib168G0728 Durio zibethinus HOM05D002238 ORTHO05D007272 1.4e-27 126.7 204 42.2
Thecc.09G149800 Theobroma cacao HOM05D002238 ORTHO05D007272 2.4e-27 125.9 201 42.3
CANSAT54G2252 Cannabis sativa HOM05D002238 ORTHO05D007272 4.2e-27 125.2 107 63.6
GSVIVG01035523001 Vitis vinifera HOM05D002238 ORTHO05D007272 4.2e-27 125.2 146 51.4
unitig_32.g11479 Utricularia gibba HOM05D002238 ORTHO05D007272 5.5e-27 124.8 107 57.0
RcHm_v2.0_Chr6g0298391 Rosa chinensis HOM05D002238 ORTHO05D007272 7.1e-27 124.4 108 58.3
CiPaw.05G262300 Carya illinoinensis HOM05D002238 ORTHO05D007272 1.6e-26 123.2 106 63.2
Ciclev10010344m.g Citrus clementina HOM05D002238 ORTHO05D007272 2.7e-26 122.5 213 39.0
Gohir.A09G019700 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.7e-26 122.5 106 61.3
QL01p053808 Quercus lobata HOM05D002238 ORTHO05D007272 2.7e-26 122.5 107 61.7
arahy.Tifrunner.gnm1.ann1.Z0G856 Arachis hypogaea HOM05D002238 ORTHO05D007272 4.6e-26 121.7 104 61.5
FvH4_2g29530 Fragaria vesca HOM05D002238 ORTHO05D007272 4.6e-26 121.7 105 59.0
FAN24G3345 Fragaria x ananassa HOM05D002238 ORTHO05D007272 4.6e-26 121.7 105 59.0
Gohir.D09G019000 Gossypium hirsutum HOM05D002238 ORTHO05D007272 4.6e-26 121.7 106 61.3
Lsat_1_v5_gn_5_105001 Lactuca sativa HOM05D002238 ORTHO05D007272 4.6e-26 121.7 99 62.6
arahy.Tifrunner.gnm1.ann1.H3G4DQ Arachis hypogaea HOM05D002238 ORTHO05D007272 7.9e-26 120.9 103 62.1
arahy.Tifrunner.gnm1.ann1.V2KEMD Arachis hypogaea HOM05D002238 ORTHO05D007272 7.9e-26 120.9 103 62.1
Actinidia13250 Actinidia chinensis HOM05D002238 ORTHO05D007272 1.3e-25 120.2 115 55.7
Eucgr.C01786 Eucalyptus grandis HOM05D002238 ORTHO05D007272 1.3e-25 120.2 138 48.6
FAN20G0928 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.3e-25 120.2 105 58.1
FAN27G0629 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.3e-25 120.2 105 58.1
arahy.Tifrunner.gnm1.ann1.NZP3ZD Arachis hypogaea HOM05D002238 ORTHO05D007272 1.8e-25 119.8 150 48.7
arahy.Tifrunner.gnm1.ann1.U1RD55 Arachis hypogaea HOM05D002238 ORTHO05D007272 1.8e-25 119.8 150 48.7
PGR042G2797 Punica granatum HOM05D002238 ORTHO05D007272 1.8e-25 119.8 133 48.1
Gohir.1Z049673 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.3e-25 119.4 106 60.4
TAR625G0243 Trochodendron aralioides HOM05D002238 ORTHO05D007272 3.0e-25 119.0 132 50.8
Gorai.006G022700 Gossypium raimondii HOM05D002238 ORTHO05D007272 5.1e-25 118.2 106 60.4
HanXRQChr13g0402681 Helianthus annuus HOM05D002238 ORTHO05D007272 5.1e-25 118.2 101 57.4
SGA_v2.0_scaffold20G09144 Striga asiatica HOM05D002238 ORTHO05D007272 5.1e-25 118.2 103 58.3
COL.COLO4_00195 Corchorus olitorius HOM05D002238 ORTHO05D007272 6.7e-25 117.9 106 59.4
Prupe.1G474900 Prunus persica HOM05D002238 ORTHO05D007272 1.5e-24 116.7 118 52.5
arahy.Tifrunner.gnm1.ann1.BAI8MS Arachis hypogaea HOM05D002238 ORTHO05D007272 2.5e-24 115.9 150 47.3
arahy.Tifrunner.gnm1.ann1.TBR9XZ Arachis hypogaea HOM05D002238 ORTHO05D007272 2.5e-24 115.9 150 47.3
Cpa.g.sc533.2 Carica papaya HOM05D002238 ORTHO05D007272 7.4e-24 114.4 107 57.9
Aqoxy3G03159 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 1.3e-23 113.6 105 52.4
MD08G1146200 Malus domestica HOM05D002238 ORTHO05D007272 2.8e-23 112.5 108 56.5
AUR62012126 Chenopodium quinoa HOM05D002238 ORTHO05D007272 3.7e-23 112.1 213 36.2
Ah.16g102520 Amaranthus hybridus HOM05D002238 ORTHO05D007272 4.8e-23 111.7 214 36.0
Lalb_Chr25g0279781 Lupinus albus HOM05D002238 ORTHO05D007272 1.1e-22 110.5 105 54.3
Manes.16G120100 Manihot esculenta HOM05D002238 ORTHO05D007272 1.4e-22 110.2 138 50.0
Nn2g11964 Nelumbo nucifera HOM05D002238 ORTHO05D007272 1.4e-22 110.2 106 50.9
AUR62040710 Chenopodium quinoa HOM05D002238 ORTHO05D007272 5.3e-22 108.2 139 48.9
Lj5g0011751 Lotus japonicus HOM05D002238 ORTHO05D007272 5.3e-22 108.2 99 57.6
MBI04_g24206_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D007272 5.3e-22 108.2 209 34.9
EL10Ac2g04715 Beta vulgaris HOM05D002238 ORTHO05D007272 1.5e-21 106.7 139 48.9
Sc11g0007780 Simmondsia chinensis HOM05D002238 ORTHO05D007272 1.5e-21 106.7 214 33.2
Sed0000756 Sechium edule HOM05D002238 ORTHO05D007272 7.6e-21 104.4 105 56.2
ATR1156G046 Amborella trichopoda HOM05D002238 ORTHO05D007272 1.0e-20 104.0 129 45.0
Aqoxy5G03332 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 1.0e-20 104.0 97 51.5
MD15G1119600 Malus domestica HOM05D002238 ORTHO05D007272 1.0e-20 104.0 147 44.9
PSO017G3814 Papaver somniferum HOM05D002238 ORTHO05D007272 2.2e-20 102.8 104 49.0
ClCG05G017070 Citrullus lanatus HOM05D002238 ORTHO05D007272 2.9e-20 102.4 105 54.3
Duzib187G0736 Durio zibethinus HOM05D002238 ORTHO05D007272 8.4e-20 100.9 100 55.0
PSO349G0250 Papaver somniferum HOM05D002238 ORTHO05D007272 8.4e-20 100.9 104 48.1
TWI32G0967 Tripterygium wilfordii HOM05D002238 ORTHO05D007272 8.4e-20 100.9 98 54.1
VMungo1215G1712 Vigna mungo HOM05D002238 ORTHO05D007272 1.1e-19 100.5 97 54.6
Phvul.003G021200 Phaseolus vulgaris HOM05D002238 ORTHO05D007272 1.4e-19 100.1 97 52.6
Glyma.05G173000 Glycine max HOM05D002238 ORTHO05D007272 7.1e-19 97.8 97 50.5
Ca_12577_v3 Cicer arietinum L. HOM05D002238 ORTHO05D007272 9.3e-19 97.4 99 50.5
Medtr1g031820 Medicago truncatula HOM05D002238 ORTHO05D001984 1.2e-18 97.1 138 40.6
Psat6g044800 Pisum sativum HOM05D002238 ORTHO05D001984 1.2e-18 97.1 100 49.0
Potri.006G251400 Populus trichocarpa HOM05D002238 ORTHO05D007272 1.2e-18 97.1 108 52.8
TPR.G36878 Trifolium pratense HOM05D002238 ORTHO05D001984 3.5e-18 95.5 97 48.5
MD15G1122300 Malus domestica HOM05D002238 ORTHO05D007272 6.0e-18 94.7 98 52.0
Nitab4.5_0004440g0040 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.8e-17 93.2 51 92.2
THA.LOC104810431 Tarenaya hassleriana HOM05D002238 ORTHO05D007272 5.1e-17 91.7 106 50.0
HPP92_000893 Vanilla planifolia HOM05D002238 ORTHO05D007272 5.1e-17 91.7 136 37.5
Thhalv10005310m.g Eutrema salsugineum HOM05D002238 ORTHO05D007272 6.7e-17 91.3 103 49.5
Zm00001eb090760 Zea mays HOM05D002238 ORTHO05D007272 1.1e-16 90.5 136 43.4
Sp2g22030 Schrenkiella parvula HOM05D002238 ORTHO05D007272 5.7e-16 88.2 103 47.6
CsaV3_3G046550 Cucumis sativus L. HOM05D002238 ORTHO05D007272 7.4e-16 87.8 104 48.1
Sabra06G0196500 Salix brachista HOM05D002238 ORTHO05D007272 7.4e-16 87.8 188 34.6
Carub.0006s2336 Capsella rubella HOM05D002238 ORTHO05D007272 9.7e-16 87.4 103 46.6
C07p42320 Brassica napus HOM05D002238 ORTHO05D007272 1.3e-15 87.0 101 51.5
BolC7t44761H Brassica oleracea HOM05D002238 ORTHO05D007272 1.3e-15 87.0 101 51.5
BolC2t12011H Brassica oleracea HOM05D002238 ORTHO05D007272 2.2e-15 86.3 101 50.5
AT5G25500 Arabidopsis thaliana HOM05D002238 ORTHO05D007272 2.8e-15 85.9 102 47.1
QL10p065634 Quercus lobata HOM05D002238 ORTHO05D007272 2.8e-15 85.9 82 58.5
AL6G37300 Arabidopsis lyrata HOM05D002238 ORTHO05D007272 3.7e-15 85.5 102 46.1
A02p39700 Brassica napus HOM05D002238 ORTHO05D007272 3.7e-15 85.5 101 49.5
BraA06t26543Z Brassica rapa HOM05D002238 ORTHO05D007272 3.7e-15 85.5 102 50.0
Aa31LG11G4600 Aethionema arabicum HOM05D002238 ORTHO05D007272 4.8e-15 85.1 105 45.7
CARHR187880 Cardamine hirsuta HOM05D002238 ORTHO05D007272 4.8e-15 85.1 103 47.6
BraA02t08935Z Brassica rapa HOM05D002238 ORTHO05D007272 1.1e-14 84.0 101 48.5
C02p59480 Brassica napus HOM05D002238 ORTHO05D007272 2.4e-14 82.8 198 33.3
MELO3C003684.2 Cucumis melo HOM05D002238 ORTHO05D007272 2.4e-14 82.8 106 49.1
Glyma.09G122801 Glycine max HOM05D002238 ORTHO05D007272 9.0e-14 80.9 73 53.4
QL10p065406 Quercus lobata HOM05D002238 ORTHO05D007272 1.7e-12 76.6 126 42.9
Os11g0207300 Oryza sativa ssp. japonica HOM05D002238 ORTHO05D007272 5.5e-11 71.6 139 33.1
Nitab4.5_0002007g0100 Nicotiana tabacum HOM05D002238 ORTHO05D007272 9.4e-11 70.9 58 65.5
Nitab4.5_0012587g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.6e-10 68.9 38 84.2
Nitab4.5_0011728g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.0e-09 67.4 38 81.6
Atru.chr7.2387 Acer truncatum HOM05D002238 ORTHO05D007272 1.4e-09 67.0 50 62.0
A06p36210 Brassica napus HOM05D002238 ORTHO05D007272 1.5e-08 63.5 101 45.5
SHI18572 Sapria himalayana HOM05D002238 ORTHO05D007272 9.1e-06 54.3 102 37.3


User provided reference genes

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