Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 2.9e-41 171.4 84 100.0
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 1.5e-32 142.5 81 84.0
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 1.5e-32 142.5 81 84.0
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 2.5e-32 141.7 81 82.7
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 6.0e-26 120.6 82 68.3
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 8.6e-25 116.7 73 79.5
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 2.5e-24 115.2 80 63.8
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 2.5e-24 115.2 80 65.0
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 7.3e-24 113.6 79 65.8
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 7.3e-24 113.6 79 64.6
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 2.1e-23 112.1 71 71.8
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 2.8e-23 111.7 70 75.7
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 3.6e-23 111.3 82 58.5
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 3.6e-23 111.3 79 65.8
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 3.6e-23 111.3 80 63.8
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 4.7e-23 110.9 79 62.0
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 8.1e-23 110.2 79 65.8
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.8e-22 109.0 80 62.5
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 1.8e-22 109.0 78 64.1
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 3.1e-22 108.2 78 65.4
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 4.0e-22 107.8 81 64.2
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 4.0e-22 107.8 79 60.8
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 6.8e-22 107.1 78 61.5
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 1.2e-21 106.3 81 65.4
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 2.0e-21 105.5 78 60.3
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 2.0e-21 105.5 77 59.7
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 2.6e-21 105.1 74 63.5
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 2.6e-21 105.1 79 58.2
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 4.4e-21 104.4 82 61.0
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 4.4e-21 104.4 77 59.7
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 4.4e-21 104.4 77 59.7
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 5.8e-21 104.0 79 58.2
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 9.9e-21 103.2 68 67.6
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 2.2e-20 102.1 70 67.1
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 2.2e-20 102.1 64 73.4
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 4.9e-20 100.9 78 59.0
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.9e-20 100.9 69 63.8
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 4.9e-20 100.9 71 62.0
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 4.9e-20 100.9 78 61.5
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 8.3e-20 100.1 69 66.7
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 8.3e-20 100.1 74 60.8
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 8.3e-20 100.1 78 62.8
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 8.3e-20 100.1 69 66.7
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 1.1e-19 99.8 79 58.2
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 1.4e-19 99.4 78 56.4
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.9e-19 99.0 77 55.8
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 2.4e-19 98.6 77 53.2
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 5.4e-19 97.4 73 57.5
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 5.4e-19 97.4 81 58.0
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 5.4e-19 97.4 82 57.3
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 5.4e-19 97.4 69 65.2
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 5.4e-19 97.4 75 57.3
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 5.4e-19 97.4 59 76.3
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 7.1e-19 97.1 81 58.0
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 9.2e-19 96.7 78 55.1
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 9.2e-19 96.7 78 55.1
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 9.2e-19 96.7 69 63.8
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 9.2e-19 96.7 78 57.7
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 1.2e-18 96.3 78 53.8
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.2e-18 96.3 71 59.2
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.6e-18 95.9 78 53.8
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 2.1e-18 95.5 73 58.9
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 2.1e-18 95.5 69 63.8
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 2.7e-18 95.1 78 53.8
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 2.7e-18 95.1 74 58.1
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 3.5e-18 94.7 78 53.8
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 3.5e-18 94.7 79 59.5
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 6.0e-18 94.0 78 55.1
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 7.8e-18 93.6 78 53.8
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 1.0e-17 93.2 79 59.5
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.7e-17 92.4 69 62.3
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 1.7e-17 92.4 69 60.9
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 2.3e-17 92.0 78 55.1
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 2.3e-17 92.0 77 50.6
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 3.0e-17 91.7 75 58.7
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 5.1e-17 90.9 66 63.6
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 6.6e-17 90.5 109 44.0
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.9e-16 89.0 61 62.3
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 4.3e-16 87.8 62 67.7
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 9.5e-16 86.7 66 59.1
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 9.5e-16 86.7 66 59.1
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 9.5e-16 86.7 62 62.9
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 1.6e-15 85.9 68 55.9
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 1.6e-15 85.9 68 55.9
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 2.1e-15 85.5 65 61.5
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 4.7e-15 84.3 74 55.4
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.1e-14 83.2 62 66.1
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 1.4e-14 82.8 54 68.5
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 8.9e-14 80.1 51 68.6
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 2.0e-13 79.0 50 74.0
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 2.0e-13 79.0 61 59.0
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 5.8e-13 77.4 57 63.2
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.3e-12 76.3 64 57.8
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.2e-12 75.5 64 57.8
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 3.2e-11 71.6 57 54.4
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 4.1e-11 71.2 64 54.7
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 7.1e-11 70.5 49 67.3
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 3.5e-10 68.2 52 55.8
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 5.1e-09 64.3 46 58.7
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 7.3e-08 60.5 47 53.2
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 1.6e-07 59.3 54 55.6


User provided reference genes

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