Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 4.9e-32 140.6 74 100.0
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 7.1e-31 136.7 74 97.3
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 8.7e-29 129.8 74 89.2
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.3e-27 125.9 74 87.8
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.8e-27 124.8 74 85.1
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 3.6e-27 124.4 74 86.5
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.7e-24 115.5 74 79.7
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 8.4e-24 113.2 74 79.7
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.9e-23 112.1 74 78.4
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 1.9e-23 112.1 74 77.0
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 1.9e-23 112.1 74 77.0
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 3.2e-23 111.3 74 81.1
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 4.2e-23 110.9 74 78.4
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 5.4e-23 110.5 74 78.4
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 5.4e-23 110.5 72 79.2
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 5.4e-23 110.5 74 75.7
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 7.1e-23 110.2 60 93.3
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 7.1e-23 110.2 74 77.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 9.3e-23 109.8 74 77.0
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.2e-22 109.4 72 79.2
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.2e-22 109.4 74 71.6
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 1.6e-22 109.0 74 75.7
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.6e-22 109.0 74 78.4
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 2.1e-22 108.6 74 77.0
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 2.7e-22 108.2 74 77.0
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 3.5e-22 107.8 74 78.4
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 4.6e-22 107.5 74 78.4
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 4.6e-22 107.5 74 75.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 4.6e-22 107.5 74 74.3
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 6.0e-22 107.1 72 77.8
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 6.0e-22 107.1 72 77.8
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 7.8e-22 106.7 74 75.7
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.0e-21 106.3 74 78.4
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.0e-21 106.3 72 73.6
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 1.3e-21 105.9 74 75.7
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.3e-21 105.9 74 74.3
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 1.7e-21 105.5 72 77.8
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.7e-21 105.5 74 75.7
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 1.7e-21 105.5 73 71.2
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 1.7e-21 105.5 74 71.6
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.7e-21 105.5 74 71.6
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.7e-21 105.5 74 77.0
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 2.3e-21 105.1 74 75.7
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 3.9e-21 104.4 74 73.0
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 5.1e-21 104.0 74 77.0
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 5.1e-21 104.0 74 77.0
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 5.1e-21 104.0 72 75.0
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 6.6e-21 103.6 74 68.9
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 8.7e-21 103.2 71 76.1
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.1e-20 102.8 74 73.0
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.1e-20 102.8 74 71.6
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 1.1e-20 102.8 74 74.3
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.1e-20 102.8 74 68.9
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.5e-20 101.7 71 73.2
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 2.5e-20 101.7 74 71.6
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 2.5e-20 101.7 74 74.3
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 2.5e-20 101.7 74 73.0
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 3.3e-20 101.3 74 71.6
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 9.6e-20 99.8 72 70.8
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 2.8e-19 98.2 68 76.5
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.1e-18 96.3 73 69.9
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.4e-18 95.9 72 69.4
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.8e-18 95.5 85 62.4
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 2.4e-18 95.1 63 77.8
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 2.4e-18 95.1 60 81.7
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 2.4e-18 95.1 53 88.7
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.4e-18 95.1 59 83.1
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 2.4e-18 95.1 74 66.2
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 3.1e-18 94.7 73 67.1
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 3.1e-18 94.7 71 70.4
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 3.1e-18 94.7 71 70.4
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 3.1e-18 94.7 71 70.4
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 5.3e-18 94.0 71 67.6
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 5.3e-18 94.0 72 68.1
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 6.9e-18 93.6 71 69.0
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 6.9e-18 93.6 59 83.1
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 6.9e-18 93.6 72 63.9
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 9.0e-18 93.2 72 68.1
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 1.2e-17 92.8 71 66.2
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.2e-17 92.8 71 66.2
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.5e-17 92.4 71 64.8
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.0e-17 92.0 60 76.7
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.0e-17 92.0 60 76.7
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 2.0e-17 92.0 69 68.1
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.0e-17 92.0 71 66.2
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.0e-17 92.0 71 66.2
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 2.6e-17 91.7 72 65.3
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 2.6e-17 91.7 71 67.6
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 2.6e-17 91.7 67 70.1
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 3.4e-17 91.3 71 67.6
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.5e-17 90.9 71 66.2
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 7.6e-17 90.1 71 66.2
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 7.6e-17 90.1 67 68.7
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 7.6e-17 90.1 67 68.7
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 1.7e-16 89.0 71 63.4
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 1.7e-16 89.0 59 78.0
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 3.8e-16 87.8 62 72.6
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 2.4e-15 85.1 64 60.9
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 2.4e-15 85.1 72 65.3
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.2e-14 82.8 59 74.6
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.0e-13 79.7 67 58.2
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.0e-13 79.7 69 56.5
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.8e-13 79.0 53 73.6
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 3.0e-13 78.2 59 69.5
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 2.8e-11 71.6 64 53.1
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 4.8e-11 70.9 57 63.2
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 1.4e-10 69.3 49 71.4


User provided reference genes

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