Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.0e-207 726.5 358 100.0
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.7e-194 681.4 387 87.9
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.1e-189 665.6 390 85.6
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 3.4e-179 631.7 373 84.7
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 2.8e-173 612.1 373 82.0
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 4.7e-173 611.3 371 82.7
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 8.9e-172 607.1 373 81.8
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 4.3e-158 561.6 360 80.6
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 4.1e-140 501.9 399 65.4
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 7.6e-139 497.7 376 67.0
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 5.0e-138 495.0 383 66.1
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 4.6e-136 488.4 313 74.8
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 1.8e-135 486.5 394 62.4
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 2.3e-135 486.1 383 65.3
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.5e-134 483.4 369 66.4
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 1.5e-134 483.4 341 68.6
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.3e-134 482.3 322 72.7
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 1.3e-133 480.3 389 62.5
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.7e-133 479.9 340 68.2
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.8e-133 479.2 363 65.3
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 6.3e-133 478.0 316 70.6
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 8.2e-133 477.6 318 73.6
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 1.8e-132 476.5 389 63.5
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.1e-132 475.7 334 70.4
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 3.1e-132 475.7 334 70.4
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 6.9e-132 474.6 397 61.0
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 9.1e-132 474.2 385 60.8
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.2e-131 473.8 401 60.1
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.5e-131 473.4 332 68.7
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 3.4e-131 472.2 388 62.1
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 4.5e-131 471.9 392 61.5
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 4.5e-131 471.9 313 71.9
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.7e-130 469.9 393 61.8
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 2.9e-130 469.2 329 69.6
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 2.9e-130 469.2 391 61.1
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.0e-130 468.4 309 72.2
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 8.5e-130 467.6 395 61.0
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.1e-129 467.2 335 67.5
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.1e-129 467.2 392 62.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 1.1e-129 467.2 389 61.4
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.5e-129 466.1 385 61.0
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 2.5e-129 466.1 391 61.6
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 5.5e-129 464.9 314 70.4
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 9.4e-129 464.2 327 68.5
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.2e-128 463.8 393 62.1
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 2.1e-128 463.0 387 62.0
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.1e-128 463.0 390 61.5
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 2.1e-128 463.0 388 61.3
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 2.1e-128 463.0 394 61.4
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 2.7e-128 462.6 386 61.4
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 2.7e-128 462.6 313 70.3
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 4.7e-128 461.8 327 68.5
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 1.0e-127 460.7 361 62.0
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 1.0e-127 460.7 329 68.1
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 1.4e-127 460.3 361 62.0
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.8e-127 459.9 333 67.6
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 3.0e-127 459.1 328 65.9
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 3.0e-127 459.1 327 67.9
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 3.9e-127 458.8 320 68.1
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 3.9e-127 458.8 331 67.7
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 5.1e-127 458.4 393 58.3
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 3.3e-126 455.7 393 61.6
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 3.3e-126 455.7 329 68.1
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 3.3e-126 455.7 333 66.1
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 7.4e-126 454.5 398 60.8
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 7.4e-126 454.5 361 61.5
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 7.4e-126 454.5 312 69.6
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.2e-125 453.0 329 67.2
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 3.7e-125 452.2 332 66.0
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 3.7e-125 452.2 387 59.2
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 4.8e-125 451.8 315 69.5
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 6.3e-125 451.4 370 61.6
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.1e-124 450.7 370 61.9
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 1.4e-124 450.3 370 60.5
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 2.4e-124 449.5 373 61.1
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 2.4e-124 449.5 368 60.6
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 3.1e-124 449.1 390 59.5
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 3.1e-124 449.1 397 59.9
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 5.3e-124 448.4 400 58.5
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 5.3e-124 448.4 381 59.6
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 2.0e-123 446.4 372 59.9
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 2.6e-123 446.0 377 60.2
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 2.6e-123 446.0 389 58.6
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.3e-122 443.7 374 60.7
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 3.8e-122 442.2 374 60.4
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 1.1e-121 440.7 372 61.0
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.9e-121 439.9 292 69.5
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 5.2e-119 431.8 327 63.0
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 6.7e-119 431.4 327 63.0
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 1.1e-118 430.6 380 57.9
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.1e-118 430.6 328 62.8
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 5.7e-118 428.3 292 68.8
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 5.0e-114 415.2 335 60.3
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 3.6e-112 409.1 277 70.4
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 1.0e-111 407.5 442 50.5
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 1.8e-111 406.8 397 52.4
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 3.0e-111 406.0 397 55.7
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 2.8e-109 399.4 298 64.4
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 5.4e-100 368.6 389 51.4
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 4.4e-94 349.0 322 57.5
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.7e-93 345.9 248 67.3
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.5e-91 339.0 342 53.8
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 4.5e-91 339.0 294 54.1
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 7.8e-91 338.2 294 53.7
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 1.3e-90 337.4 383 46.7
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 4.7e-88 328.9 383 46.0
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.2e-76 289.7 231 64.1
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.0e-38 164.1 99 71.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.3e-37 161.4 382 34.6
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 1.9e-33 147.5 92 75.0
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.5e-25 121.3 68 77.9
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.2e-22 111.7 65 73.8
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.2e-22 111.7 255 30.6
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 1.7e-21 107.8 77 62.3
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 6.1e-11 72.8 38 84.2
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 6.1e-11 72.8 53 66.0
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 7.9e-11 72.4 109 45.9
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 1.5e-09 68.2 128 34.4


User provided reference genes

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