Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.8e-225 783.9 387 100.0
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 9.0e-202 706.8 395 89.4
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.3e-194 681.0 387 87.9
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 2.5e-183 645.6 389 82.8
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.5e-177 626.3 389 80.7
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 8.5e-176 620.5 389 80.5
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 4.2e-175 618.2 389 80.5
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 5.2e-157 558.1 388 75.3
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 3.8e-144 515.4 418 63.9
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.4e-141 506.9 396 65.7
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 2.4e-138 496.1 345 70.4
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 2.4e-138 496.1 399 64.2
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.1e-138 495.4 412 62.4
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 4.5e-137 491.9 399 63.2
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.9e-137 491.5 346 69.9
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 2.9e-136 489.2 356 67.7
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 2.9e-136 489.2 356 67.7
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 8.6e-136 487.6 354 66.9
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.9e-135 486.5 380 63.4
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 3.3e-135 485.7 339 70.2
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 5.5e-135 485.0 390 63.8
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 5.5e-135 485.0 357 66.7
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 2.8e-134 482.6 406 62.1
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 3.0e-133 479.2 410 61.0
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 4.0e-133 478.8 409 59.9
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 8.9e-133 477.6 362 64.6
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.2e-132 477.2 348 67.0
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.0e-132 476.5 406 59.4
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 4.4e-132 475.3 407 60.0
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.3e-131 473.8 411 59.1
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.3e-131 473.8 415 58.8
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 1.3e-131 473.8 409 59.7
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 8.3e-131 471.1 412 60.0
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.4e-130 469.5 402 60.2
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 4.1e-130 468.8 405 59.5
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 7.0e-130 468.0 387 60.2
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 9.2e-130 467.6 387 60.2
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 9.2e-130 467.6 411 58.9
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 9.2e-130 467.6 406 59.4
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 1.6e-129 466.8 341 65.1
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.6e-129 466.8 349 65.6
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 1.6e-129 466.8 406 61.8
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 2.7e-129 466.1 413 58.4
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 3.5e-129 465.7 410 60.7
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 4.5e-129 465.3 343 65.6
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 5.9e-129 464.9 417 58.5
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 5.9e-129 464.9 418 57.4
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.0e-128 464.2 387 59.9
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.3e-128 463.8 341 65.7
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.7e-128 463.4 341 66.0
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 1.7e-128 463.4 405 59.3
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 2.9e-128 462.6 376 61.2
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 2.9e-128 462.6 409 60.9
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 5.0e-128 461.8 387 59.2
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.1e-127 460.7 406 59.4
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 1.1e-127 460.7 353 64.3
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.5e-127 460.3 304 71.7
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 1.5e-127 460.3 340 65.3
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.5e-127 460.3 343 65.0
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 1.5e-127 460.3 388 59.8
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 2.5e-127 459.5 345 64.6
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 3.3e-127 459.1 421 58.0
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 3.3e-127 459.1 411 58.6
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 3.3e-127 459.1 423 57.7
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 4.3e-127 458.8 386 58.5
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.2e-126 457.2 339 65.5
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.2e-126 457.2 310 70.3
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 2.1e-126 456.4 406 59.1
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 4.7e-126 455.3 391 59.8
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 4.7e-126 455.3 391 59.6
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 4.7e-126 455.3 342 64.9
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 8.0e-126 454.5 402 58.0
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.4e-125 453.8 392 58.4
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.4e-125 453.8 392 59.7
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 1.4e-125 453.8 412 58.0
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.8e-125 453.4 396 58.6
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 1.8e-125 453.4 404 57.7
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 4.0e-125 452.2 392 59.4
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 8.9e-125 451.1 410 58.8
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 8.9e-125 451.1 409 58.9
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 8.9e-125 451.1 397 57.4
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.5e-124 450.3 405 57.0
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 2.0e-124 449.9 415 58.1
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.0e-124 449.9 391 59.8
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 2.6e-124 449.5 307 69.7
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 3.4e-124 449.1 416 57.5
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 4.1e-122 442.2 327 65.1
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 2.7e-121 439.5 393 56.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.3e-120 437.2 348 61.5
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 6.6e-120 434.9 338 61.8
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 8.6e-120 434.5 338 61.8
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.6e-118 430.3 287 68.6
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 3.2e-114 416.0 338 59.5
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 2.7e-113 412.9 414 52.2
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 5.1e-112 408.7 450 49.3
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 9.5e-111 404.4 415 53.7
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 1.5e-108 397.1 272 68.8
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 9.9e-108 394.4 295 64.1
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 3.1e-101 372.9 411 49.6
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 9.9e-100 367.9 346 56.9
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 8.1e-94 348.2 353 53.3
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.1e-90 337.8 242 67.4
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 1.4e-90 337.4 407 44.0
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.1e-89 333.6 293 54.6
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.5e-89 332.8 293 54.3
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.1e-87 327.8 406 43.8
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.9e-82 310.5 252 63.5
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 4.7e-41 172.9 399 35.1
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 9.1e-37 158.7 99 69.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 6.5e-35 152.5 92 76.1
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 8.3e-30 135.6 158 49.4
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.6e-23 114.0 255 31.8
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.0e-20 104.4 61 73.8
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 2.5e-18 97.4 73 58.9
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 4.9e-14 83.2 70 61.4
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 3.2e-13 80.5 135 43.0
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.7e-11 74.7 53 67.9
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 9.8e-07 58.9 122 32.0


User provided reference genes

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