Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 0.0e+00 1563.5 853 100.0
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 0.0e+00 1164.4 859 78.0
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 5.6e-289 997.7 699 80.1
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 7.4e-249 864.4 866 60.9
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 2.4e-247 859.4 894 57.7
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 1.6e-243 846.7 608 76.6
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 9.7e-241 837.4 872 57.9
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 2.2e-229 799.7 868 56.6
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 2.9e-229 799.3 933 52.1
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 3.6e-227 792.3 868 54.0
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 8.0e-227 791.2 866 54.8
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 1.3e-224 783.9 862 54.3
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 9.1e-223 777.7 868 55.5
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 1.3e-221 773.9 873 54.5
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 3.6e-219 765.8 812 57.4
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 1.1e-215 754.2 878 52.2
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 1.5e-212 743.8 870 52.4
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 2.1e-211 740.0 862 53.7
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 2.8e-211 739.6 843 56.7
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 8.0e-211 738.0 856 54.0
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 2.3e-210 736.5 825 54.5
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 3.4e-209 732.6 866 51.2
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 2.2e-208 729.9 907 53.4
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.1e-207 727.6 871 52.4
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 3.1e-207 726.1 866 50.9
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.3e-205 720.7 868 51.2
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 7.3e-204 714.9 844 51.7
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 1.2e-203 714.1 753 56.8
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.8e-203 713.0 869 50.7
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 2.3e-202 709.9 853 50.6
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 4.9e-200 702.2 874 53.9
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 3.2e-199 699.5 861 51.6
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 9.2e-199 698.0 867 50.6
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 2.3e-197 693.3 855 51.9
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 1.1e-196 691.0 851 52.6
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 1.9e-196 690.3 823 52.5
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 1.6e-195 687.2 861 52.0
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 6.2e-195 685.3 864 51.6
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 4.0e-194 682.6 886 51.8
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 6.8e-194 681.8 869 51.4
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 2.0e-193 680.2 860 50.7
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 2.0e-193 680.2 858 51.2
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 9.8e-193 677.9 872 50.3
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 1.3e-192 677.6 861 51.7
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 1.7e-192 677.2 860 50.7
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 2.9e-192 676.4 850 50.8
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 1.1e-191 674.5 856 50.8
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 1.9e-191 673.7 864 52.3
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 4.1e-191 672.5 849 50.5
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 2.7e-190 669.8 829 49.7
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 2.7e-190 669.8 867 49.9
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 7.8e-190 668.3 829 49.9
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 1.0e-189 667.9 889 48.6
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 1.3e-189 667.5 868 48.8
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 1.1e-188 664.5 855 49.5
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 5.6e-188 662.1 839 50.7
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 3.6e-187 659.4 860 50.5
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 4.7e-187 659.1 851 50.2
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 4.7e-187 659.1 865 50.8
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 6.2e-187 658.7 769 53.1
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 8.1e-187 658.3 867 51.0
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 6.8e-186 655.2 836 50.7
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 8.9e-186 654.8 853 50.4
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 1.2e-185 654.4 864 49.7
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 1.2e-185 654.4 842 50.6
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 7.5e-185 651.7 872 48.4
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 2.4e-183 646.7 865 48.6
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 3.2e-183 646.4 873 49.1
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 4.6e-182 642.5 843 49.2
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 3.0e-181 639.8 860 49.2
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 5.2e-178 629.0 935 45.0
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 4.4e-177 625.9 789 49.7
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 5.8e-177 625.5 829 49.6
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 7.6e-177 625.2 819 50.4
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 1.1e-175 621.3 852 49.1
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 4.2e-175 619.4 818 51.0
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 9.3e-175 618.2 869 50.4
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 2.3e-173 613.6 871 46.8
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 9.6e-172 608.2 778 50.0
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 3.6e-171 606.3 861 49.8
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 6.9e-170 602.1 859 47.3
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 1.5e-169 600.9 858 47.1
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.4e-169 599.7 868 46.9
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 2.9e-168 596.7 859 49.6
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 3.8e-168 596.3 817 47.5
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.1e-166 590.5 870 46.6
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 1.3e-165 587.8 847 46.3
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 3.9e-165 586.3 761 48.5
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.3e-164 582.0 876 45.9
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 2.4e-162 577.0 862 45.5
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 4.0e-162 576.2 829 49.3
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 4.5e-161 572.8 867 45.7
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 7.6e-161 572.0 807 47.5
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 9.9e-161 571.6 858 45.1
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 3.2e-159 566.6 882 44.8
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 9.3e-159 565.1 873 46.0
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 9.3e-159 565.1 873 46.2
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.5e-158 563.1 873 45.9
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 1.8e-154 550.8 837 44.7
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 5.3e-154 549.3 790 45.9
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.0e-149 535.0 855 43.6
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 2.3e-149 533.9 754 46.4
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 3.0e-149 533.5 838 43.4
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 4.3e-148 529.6 894 43.8
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 9.6e-148 528.5 754 46.3
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 5.8e-145 519.2 755 46.8
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.8e-141 507.7 669 49.9
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.1e-138 498.4 823 44.1
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 6.9e-138 495.7 826 43.6
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.8e-136 490.0 855 41.6
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 8.8e-133 478.8 847 40.5
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 5.0e-128 463.0 671 45.9
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 3.2e-127 460.3 825 42.2
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 4.2e-127 459.9 840 41.8
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 2.1e-126 457.6 701 45.8
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 2.2e-123 447.6 815 41.5
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 2.6e-121 440.7 753 45.7
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 7.2e-119 432.6 732 45.1
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 2.1e-118 431.0 745 45.6
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 4.7e-118 429.9 757 45.4
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 2.3e-117 427.6 814 39.6
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 1.1e-116 425.2 758 45.3
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.1e-114 418.7 859 38.1
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 3.1e-114 417.2 793 43.3
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 2.4e-106 391.0 752 43.1
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 8.5e-104 382.5 723 43.7
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 1.0e-101 375.6 704 41.2
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 3.4e-100 370.5 706 40.7
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 3.1e-98 364.0 704 40.5
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 5.4e-98 363.2 698 40.5
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 5.4e-98 363.2 706 40.2
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.8e-96 357.1 721 42.9
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 1.2e-89 335.5 691 40.7
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 2.4e-82 311.2 490 42.0
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 1.3e-80 305.4 287 60.3
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 1.3e-80 305.4 287 60.3
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 2.1e-73 281.6 409 44.7
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 2.6e-68 264.6 632 35.6
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 1.1e-66 259.2 728 34.9
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 9.2e-66 256.1 962 29.3
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 5.6e-63 246.9 917 32.0
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 2.6e-60 238.0 846 29.4
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 3.8e-59 234.2 703 31.9
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 1.7e-56 225.3 373 43.4
CAN.G1387.1 Capsicum annuum HOM05D003640 ORTHO05D004439 2.1e-54 218.4 211 62.6
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 1.2e-52 212.6 307 44.3
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 4.2e-42 177.6 370 37.3
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 3.9e-40 171.0 157 56.1
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 8.7e-40 169.9 856 26.2
CAN.G732.35 Capsicum annuum HOM05D003640 ORTHO05D004439 1.9e-39 168.7 194 56.7
CAN.G598.13 Capsicum annuum HOM05D003640 ORTHO05D004439 1.3e-38 166.0 203 53.2
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 2.9e-35 154.8 172 52.9
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 8.4e-35 153.3 213 46.5
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 1.9e-34 152.1 425 31.8
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 3.9e-32 144.4 154 55.8
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 1.6e-30 139.0 122 59.0
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 1.6e-30 139.0 122 59.0
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 8.4e-27 126.7 95 76.8
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 1.9e-26 125.6 119 55.5
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 4.6e-25 120.9 110 55.5
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 7.9e-25 120.2 126 52.4
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 1.0e-24 119.8 124 52.4
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 3.3e-23 114.8 77 77.9
CAN.G358.52 Capsicum annuum HOM05D003640 ORTHO05D004439 2.6e-20 105.1 100 63.0
CAN.G300.4 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-19 102.4 85 65.9
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 1.4e-16 92.8 147 42.2
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-15 89.0 135 43.7
PSO170G6851 Papaver somniferum HOM05D003640 ORTHO05D004439 7.4e-15 87.0 147 41.5
CAN.G125.22 Capsicum annuum HOM05D001472 ORTHO05D004439 3.7e-14 84.7 95 51.6
CAN.G1307.1 Capsicum annuum HOM05D001472 ORTHO05D004439 2.0e-12 79.0 71 63.4
PGR042G3558 Punica granatum HOM05D000045 ORTHO05D000611 3.8e-11 74.7 156 38.5
CAN.G578.12 Capsicum annuum HOM05D001816 ORTHO05D004439 1.4e-10 72.8 57 70.2
MELO3C010660.2 Cucumis melo HOM05D003640 ORTHO05D004439 5.5e-10 70.9 52 65.4
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 4.7e-09 67.8 65 56.9
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 6.1e-09 67.4 85 41.2
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 6.1e-09 67.4 85 41.2
AL8G28750 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 5.1e-08 64.3 189 33.9
ECA232G0388 Erigeron canadensis HOM05D003640 ORTHO05D004439 9.7e-07 60.1 76 43.4
ECA233G3458 Erigeron canadensis HOM05D000153 ORTHO05D002648 9.7e-07 60.1 74 44.6


User provided reference genes

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