Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001988g0060 Nicotiana tabacum HOM05D009290 ORTHO05D009597 2.6e-64 248.8 153 100.0
Nitab4.5_0000111g0060 Nicotiana tabacum HOM05D008455 ORTHO05D009597 9.8e-51 203.8 137 78.1
Nitab4.5_0001078g0120 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.3e-50 203.4 139 77.7
Nitab4.5_0017029g0010 Nicotiana tabacum HOM05D008455 ORTHO05D009597 1.6e-48 196.4 128 81.2
Nitab4.5_0010535g0040 Nicotiana tabacum HOM05D009290 ORTHO05D009597 7.0e-41 171.0 138 71.0
Nitab4.5_0014285g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.7e-34 149.8 125 64.0
Nitab4.5_0010317g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.2e-32 143.7 88 86.4
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 3.6e-29 132.1 124 55.6
Manes.11G024650 Manihot esculenta HOM05D008455 ORTHO05D009597 4.0e-28 128.6 125 52.8
Manes.17G118642 Manihot esculenta HOM05D008455 ORTHO05D009597 4.0e-28 128.6 125 52.0
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.5e-27 126.7 97 74.2
Nitab4.5_0001261g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 4.4e-27 125.2 122 62.3
Manes.17G119328 Manihot esculenta HOM05D008455 ORTHO05D009597 7.5e-27 124.4 125 51.2
Nitab4.5_0001756g0100 Nicotiana tabacum HOM05D009290 ORTHO05D009597 8.3e-26 120.9 90 72.2
Nitab4.5_0000030g0320 Nicotiana tabacum HOM05D009290 ORTHO05D009597 4.0e-20 102.1 56 91.1
Nitab4.5_0007164g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 6.8e-20 101.3 55 92.7
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 1.3e-18 97.1 86 61.6
Ah.01g006000 Amaranthus hybridus HOM05D008455 ORTHO05D009597 7.8e-16 87.8 131 36.6
Nitab4.5_0006731g0050 Nicotiana tabacum HOM05D013259 ORTHO05D009597 7.8e-16 87.8 46 93.5
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 1.3e-15 87.0 144 35.4
EL10Ac6g14371 Beta vulgaris HOM05D008455 ORTHO05D009597 1.3e-15 87.0 144 36.1
EL10Ac3g06519 Beta vulgaris HOM05D008455 ORTHO05D009597 1.7e-15 86.7 145 35.9
EL10Ac9g22691 Beta vulgaris HOM05D008455 ORTHO05D009597 1.7e-15 86.7 144 35.4
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 2.3e-15 86.3 144 35.4
Manes.05G149301 Manihot esculenta HOM05D013259 ORTHO05D009597 3.0e-15 85.9 53 67.9
EL10Ac2g03454 Beta vulgaris HOM05D008455 ORTHO05D009597 3.9e-15 85.5 144 34.7
Manes.05G186752 Manihot esculenta HOM05D013259 ORTHO05D009597 6.6e-15 84.7 53 66.0
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 8.6e-15 84.3 144 34.0
EL10As3g23351 Beta vulgaris HOM05D008455 ORTHO05D009597 1.5e-14 83.6 144 34.7
Manes.13G093532 Manihot esculenta HOM05D013259 ORTHO05D009597 1.9e-14 83.2 53 64.2
Manes.08G078911 Manihot esculenta HOM05D013259 ORTHO05D009597 2.5e-14 82.8 53 62.3
EL10Ac6g13954 Beta vulgaris HOM05D008455 ORTHO05D009597 3.3e-14 82.4 131 35.9
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 4.3e-14 82.0 139 35.3
Nitab4.5_0000737g0090 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.2e-13 80.5 45 91.1
Manes.12G085832 Manihot esculenta HOM05D013259 ORTHO05D009597 1.6e-13 80.1 53 62.3
Nitab4.5_0002907g0070 Nicotiana tabacum HOM05D009290 ORTHO05D009597 2.1e-13 79.7 46 87.0
AUR62037441 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.8e-13 79.3 145 29.7
AUR62033711 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.7e-13 78.6 145 30.3
EL10Ac3g06257 Beta vulgaris HOM05D008455 ORTHO05D009597 6.2e-13 78.2 142 33.8
Hund01459 Selenicereus undatus HOM05D008455 ORTHO05D009597 8.1e-13 77.8 144 31.9
AUR62039826 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.3e-12 76.3 145 30.3
AUR62039352 Chenopodium quinoa HOM05D008455 ORTHO05D009597 5.2e-12 75.1 145 30.3
Manes.16G058250 Manihot esculenta HOM05D013259 ORTHO05D009597 5.2e-12 75.1 48 62.5
AUR62037081 Chenopodium quinoa HOM05D008455 ORTHO05D009597 6.8e-12 74.7 145 28.3
AUR62039309 Chenopodium quinoa HOM05D008455 ORTHO05D009597 8.9e-12 74.3 144 29.9
AUR62037410 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.4e-11 72.0 145 28.3
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.3e-10 70.5 143 32.2
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.2e-10 69.7 144 33.3
AUR62034408 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.4e-09 67.0 141 27.0
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.4e-09 65.1 79 36.7
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 1.6e-08 63.5 122 30.3
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.6e-08 63.5 148 31.1
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.1e-08 63.2 143 29.4
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.7e-08 62.8 143 30.1
AUR62043094 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.7e-08 62.8 98 32.7
AUR62039170 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.5e-08 62.4 138 29.0
AUR62037945 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.6e-08 62.0 104 30.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 6.0e-08 61.6 138 29.0
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-07 60.5 143 28.0
AUR62037959 Chenopodium quinoa HOM05D000107 ORTHO05D009597 1.3e-07 60.5 113 29.2
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.3e-07 60.5 143 29.4
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.3e-07 59.7 119 35.3
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.9e-07 58.9 118 35.6
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 5.1e-07 58.5 143 29.4
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 5.1e-07 58.5 139 30.2
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.1e-06 57.4 114 33.3
AUR62033683 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.1e-06 57.4 113 28.3
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 1.1e-06 57.4 109 35.8
AUR62042311 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.5e-06 57.0 110 30.0
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 1.9e-06 56.6 143 29.4
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.3e-06 55.8 146 28.8
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 4.3e-06 55.5 102 34.3
AUR62033793 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.3e-06 55.5 105 29.5
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 4.3e-06 55.5 112 33.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-06 55.5 144 29.2
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 4.3e-06 55.5 101 33.7
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 5.6e-06 55.1 120 30.8
AUR62039354 Chenopodium quinoa HOM05D008455 ORTHO05D009597 7.3e-06 54.7 96 31.2
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 9.6e-06 54.3 102 32.4
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 9.6e-06 54.3 141 29.8
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 9.6e-06 54.3 112 32.1


User provided reference genes

Program Settings