Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.8e-35 151.4 74 100.0
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 4.6e-22 107.5 63 84.1
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.7e-21 105.5 61 86.9
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 3.0e-21 104.8 63 84.1
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 6.6e-21 103.6 62 85.5
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 6.6e-21 103.6 56 91.1
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 4.8e-19 97.4 63 77.8
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 1.1e-18 96.3 63 77.8
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.4e-17 91.3 71 73.2
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 7.6e-17 90.1 69 69.6
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 2.9e-16 88.2 51 84.3
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 8.4e-16 86.7 51 84.3
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 8.4e-16 86.7 51 84.3
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 8.4e-16 86.7 51 84.3
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 4.2e-15 84.3 51 82.4
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 5.4e-15 84.0 51 82.4
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 1.2e-14 82.8 51 82.4
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 1.2e-14 82.8 64 68.8
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 1.2e-14 82.8 51 82.4
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 1.2e-14 82.8 51 82.4
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 1.2e-14 82.8 51 82.4
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 1.2e-14 82.8 51 82.4
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.2e-14 82.8 51 80.4
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 4.6e-14 80.9 51 80.4
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.0e-13 79.7 63 69.8
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.3e-13 79.3 51 76.5
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 1.8e-13 79.0 55 76.4
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.0e-13 78.2 69 65.2
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 8.7e-13 76.6 49 75.5
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 9.6e-12 73.2 59 69.5
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 9.6e-12 73.2 59 69.5
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 9.6e-12 73.2 59 69.5
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 9.6e-12 73.2 59 69.5
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 1.3e-11 72.8 44 79.5
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.6e-11 72.4 38 92.1
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.7e-11 71.2 61 62.3
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 6.2e-11 70.5 43 81.4
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 8.1e-11 70.1 45 73.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.8e-10 68.9 66 62.1
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 5.8e-09 63.9 43 74.4
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 2.2e-08 62.0 59 59.3
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 3.8e-08 61.2 37 81.1
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 4.9e-08 60.8 48 66.7
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 4.9e-08 60.8 48 66.7
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 1.9e-07 58.9 59 61.0
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 1.9e-07 58.9 59 61.0
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 4.2e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 4.2e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 4.2e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 4.2e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 4.2e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 4.2e-07 57.8 29 89.7
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 4.2e-07 57.8 29 89.7
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 4.2e-07 57.8 41 73.2
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 9.3e-07 56.6 41 73.2
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 9.3e-07 56.6 41 73.2
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 9.3e-07 56.6 41 73.2
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-06 56.2 29 86.2
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 1.2e-06 56.2 29 86.2
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 2.1e-06 55.5 42 71.4


User provided reference genes

Program Settings