Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001985g0010 Nicotiana tabacum HOM05D007464 ORTHO05D009388 3.7e-134 481.9 302 100.0
Nitab4.5_0008256g0020 Nicotiana tabacum HOM05D007464 ORTHO05D009388 1.5e-119 433.3 301 84.1
Nitab4.5_0008984g0010 Nicotiana tabacum HOM05D007464 ORTHO05D009388 1.5e-116 423.3 301 89.0
Nitab4.5_0001985g0030 Nicotiana tabacum HOM05D007464 ORTHO05D009388 2.6e-116 422.5 301 89.4
CAN.G1466.5 Capsicum annuum HOM05D007464 ORTHO05D009388 1.6e-105 386.7 301 84.7
PGSC0003DMG400034780 Solanum tuberosum HOM05D007464 ORTHO05D009388 1.6e-105 386.7 301 84.7
PGSC0003DMG402003815 Solanum tuberosum HOM05D007464 ORTHO05D009388 1.6e-105 386.7 301 84.7
Solyc09g074280.1 Solanum lycopersicum HOM05D007464 ORTHO05D009388 1.8e-104 383.3 301 76.1
PGSC0003DMG401003815 Solanum tuberosum HOM05D007464 ORTHO05D009388 1.1e-103 380.6 301 84.1
Sopen09g029120 Solanum pennellii HOM05D007464 ORTHO05D009388 2.0e-103 379.8 301 82.7
Solyc09g074290.1 Solanum lycopersicum HOM05D007464 ORTHO05D009388 2.6e-103 379.4 301 81.7
Peaxi162Scf00006g00369 Petunia axillaris HOM05D007464 ORTHO05D009388 7.4e-103 377.9 298 81.9
Peaxi162Scf00006g00365 Petunia axillaris HOM05D007464 ORTHO05D009388 1.8e-101 373.2 301 80.4
Sopen09g029110 Solanum pennellii HOM05D007464 ORTHO05D009388 7.0e-101 371.3 301 74.8
Lsat_1_v5_gn_5_189900 Lactuca sativa HOM05D007464 ORTHO05D009388 3.3e-74 282.7 301 58.8
Hma1.2p1_0209F.1_g089270 Hydrangea macrophylla HOM05D007464 ORTHO05D009388 7.3e-74 281.6 304 61.8
Cc01_g20010 Coffea canephora HOM05D007464 ORTHO05D009388 6.2e-73 278.5 306 58.2
Actinidia00714 Actinidia chinensis HOM05D007464 ORTHO05D009388 1.4e-72 277.3 301 59.1
DCAR_012440 Daucus carota HOM05D007464 ORTHO05D009388 6.4e-70 268.5 301 56.5
Dinv32981 Davidia involucrata HOM05D007464 ORTHO05D009388 6.4e-70 268.5 303 51.2
Hma1.2p1_1651F.1_g295790 Hydrangea macrophylla HOM05D007464 ORTHO05D009388 8.3e-70 268.1 303 57.8
DCAR_002779 Daucus carota HOM05D007464 ORTHO05D009388 4.1e-69 265.8 301 57.1
ECA248G1268 Erigeron canadensis HOM05D007464 ORTHO05D009388 7.0e-69 265.0 301 53.5
DCAR_018375 Daucus carota HOM05D007464 ORTHO05D009388 3.0e-67 259.6 301 56.5
DCAR_018376 Daucus carota HOM05D007464 ORTHO05D009388 3.0e-67 259.6 301 56.5
Migut.D00243 Erythranthe guttata HOM05D007464 ORTHO05D009388 3.1e-64 249.6 303 62.7
TAR362G0634 Trochodendron aralioides HOM05D007464 ORTHO05D009388 2.0e-63 246.9 301 53.5
CAN.G1466.4 Capsicum annuum HOM05D007464 ORTHO05D009388 9.8e-63 244.6 223 78.9
ECA247G3730 Erigeron canadensis HOM05D007464 ORTHO05D009388 6.4e-62 241.9 301 52.2
SalBow2G2643 Salvia bowleyana HOM05D007464 ORTHO05D009388 1.9e-61 240.4 303 54.1
Potri.002G213200 Populus trichocarpa HOM05D007464 ORTHO05D009388 4.1e-61 239.2 302 48.0
Lsat_1_v5_gn_9_5000 Lactuca sativa HOM05D007464 ORTHO05D009388 9.2e-61 238.0 302 52.6
FvH4_2g24420 Fragaria vesca HOM05D007464 ORTHO05D009388 2.7e-60 236.5 261 49.0
FAN24G2954 Fragaria x ananassa HOM05D007464 ORTHO05D009388 2.7e-60 236.5 261 49.0
MD03G1273500 Malus domestica HOM05D007464 ORTHO05D009388 6.0e-60 235.3 262 48.5
MD11G1296100 Malus domestica HOM05D007464 ORTHO05D009388 6.0e-60 235.3 304 50.0
Prupe.8G249900 Prunus persica HOM05D007464 ORTHO05D009388 7.8e-60 235.0 304 52.3
Haze_04781 Corylus avellana HOM05D007464 ORTHO05D009388 2.3e-59 233.4 259 46.7
FAN20G1108 Fragaria x ananassa HOM05D007464 ORTHO05D009388 3.0e-59 233.0 261 48.7
Sabra14G0102300 Salix brachista HOM05D007464 ORTHO05D009388 3.9e-59 232.6 301 49.5
Cfa006067 Carpinus fangiana HOM05D007464 ORTHO05D009388 8.6e-59 231.5 259 45.9
Manes.05G070400 Manihot esculenta HOM05D007464 ORTHO05D009388 1.1e-58 231.1 301 49.8
Atru.chr5.1306 Acer truncatum HOM05D007464 ORTHO05D009388 3.3e-58 229.6 255 49.4
Duzib211G0172 Durio zibethinus HOM05D007464 ORTHO05D009388 7.3e-58 228.4 301 46.2
FAN15G0926 Fragaria x ananassa HOM05D007464 ORTHO05D009388 2.1e-57 226.9 261 47.9
FAN27G3498 Fragaria x ananassa HOM05D007464 ORTHO05D009388 4.7e-57 225.7 261 47.5
Nn4g26088 Nelumbo nucifera HOM05D007464 ORTHO05D009388 4.7e-57 225.7 309 47.6
TWI59G0843 Tripterygium wilfordii HOM05D007464 ORTHO05D009388 4.7e-57 225.7 301 45.5
HanXRQChr10g0283061 Helianthus annuus HOM05D007464 ORTHO05D009388 6.2e-57 225.3 301 48.5
Aqoxy5G00591 Aquilegia oxysepala HOM05D007464 ORTHO05D009388 1.1e-56 224.6 301 53.5
Duzib138G0973 Durio zibethinus HOM05D007464 ORTHO05D009388 2.3e-56 223.4 301 45.5
HanXRQChr01g0002881 Helianthus annuus HOM05D007464 ORTHO05D009388 5.2e-56 222.2 301 50.5
RcHm_v2.0_Chr6g0292251 Rosa chinensis HOM05D007464 ORTHO05D009388 6.8e-56 221.9 261 47.1
QL12p023217 Quercus lobata HOM05D007464 ORTHO05D009388 1.2e-55 221.1 259 45.2
Thecc.01G287900 Theobroma cacao HOM05D007464 ORTHO05D009388 7.6e-55 218.4 301 41.5
Gohir.A08G184300 Gossypium hirsutum HOM05D007464 ORTHO05D009388 4.9e-54 215.7 302 47.0
ClCG09G006650 Citrullus lanatus HOM05D007464 ORTHO05D009388 8.4e-54 214.9 258 53.1
COL.COLO4_08053 Corchorus olitorius HOM05D007464 ORTHO05D009388 8.4e-54 214.9 302 45.4
Gohir.D08G202800 Gossypium hirsutum HOM05D007464 ORTHO05D009388 4.1e-53 212.6 302 46.4
Gorai.004G214200 Gossypium raimondii HOM05D007464 ORTHO05D009388 4.1e-53 212.6 302 46.4
CsaV3_7G028410 Cucumis sativus L. HOM05D007464 ORTHO05D009388 9.2e-53 211.5 256 48.4
Duzib133G1000 Durio zibethinus HOM05D007464 ORTHO05D009388 9.2e-53 211.5 301 43.5
MELO3C015881.2 Cucumis melo HOM05D007464 ORTHO05D009388 1.2e-52 211.1 256 55.1
vmacro02528 Vaccinium macrocarpon HOM05D007464 ORTHO05D009388 6.0e-52 208.8 316 48.7
Ca_10384_v3 Cicer arietinum L. HOM05D007464 ORTHO05D009388 3.0e-51 206.5 260 42.7
Lalb_Chr06g0163271 Lupinus albus HOM05D007464 ORTHO05D009388 1.5e-50 204.1 260 42.7
CiPaw.07G097200 Carya illinoinensis HOM05D007464 ORTHO05D009388 2.5e-50 203.4 301 46.8
CANSAT25G0135 Cannabis sativa HOM05D007464 ORTHO05D009388 4.3e-50 202.6 261 45.2
Cpa.g.sc9.143 Carica papaya HOM05D007464 ORTHO05D009388 5.6e-50 202.2 302 40.7
PGR119G1331 Punica granatum HOM05D007464 ORTHO05D009388 5.6e-50 202.2 257 44.4
MBI19_g27178_MAGBIO Magnolia biondii HOM05D007464 ORTHO05D009388 3.6e-49 199.5 305 48.5
Ciclev10019999m.g Citrus clementina HOM05D007464 ORTHO05D009388 2.0e-47 193.7 231 51.9
Phvul.007G167500 Phaseolus vulgaris HOM05D007464 ORTHO05D009388 2.6e-47 193.4 260 46.2
arahy.Tifrunner.gnm1.ann1.TWB4J4 Arachis hypogaea HOM05D007464 ORTHO05D009388 5.8e-47 192.2 259 41.7
VMungo0720G1822 Vigna mungo HOM05D007464 ORTHO05D009388 7.6e-47 191.8 260 42.3
Lj1C41G0 Lonicera japonica HOM05D007464 ORTHO05D009388 2.2e-46 190.3 241 51.5
arahy.Tifrunner.gnm1.ann1.KRYP2Z Arachis hypogaea HOM05D007464 ORTHO05D009388 3.8e-46 189.5 259 41.7
Medtr1g089180 Medicago truncatula HOM05D007464 ORTHO05D009388 4.9e-46 189.1 257 40.5
Glyma.02G151200 Glycine max HOM05D007464 ORTHO05D009388 1.9e-45 187.2 259 41.7
Psat6g168480 Pisum sativum HOM05D007464 ORTHO05D009388 1.9e-45 187.2 259 40.2
PSO832G1506 Papaver somniferum HOM05D007464 ORTHO05D009388 8.7e-43 178.3 302 50.3
Lj5g0006511 Lotus japonicus HOM05D007464 ORTHO05D009388 1.1e-42 177.9 261 48.3
arahy.Tifrunner.gnm1.ann1.9V8R16 Arachis hypogaea HOM05D007464 ORTHO05D009388 1.2e-39 167.9 265 39.6
PSO210G5947 Papaver somniferum HOM05D007464 ORTHO05D009388 2.0e-39 167.2 301 41.2
Rhsim13G0020100 Rhododendron simsii HOM05D007464 ORTHO05D009388 3.8e-38 162.9 181 53.6
Eucgr.H01612 Eucalyptus grandis HOM05D007464 ORTHO05D009388 3.5e-36 156.4 305 49.5
CDE05G3330 Ceratophyllum demersum HOM05D007464 ORTHO05D009388 1.5e-31 141.0 302 37.4
TPR.G16955 Trifolium pratense HOM05D007464 ORTHO05D009388 7.6e-31 138.7 142 52.1
arahy.Tifrunner.gnm1.ann1.6Q5HDN Arachis hypogaea HOM05D007464 ORTHO05D009388 9.3e-29 131.7 203 37.9
Oeu038991.1 Olea europaea HOM05D007464 ORTHO05D009388 2.3e-27 127.1 163 57.1
HPP92_013668 Vanilla planifolia HOM05D007464 ORTHO05D009388 2.3e-19 100.5 265 31.7
HPP92_013650 Vanilla planifolia HOM05D007464 ORTHO05D009388 3.3e-18 96.7 262 31.7
ATR0487G010 Amborella trichopoda HOM05D007464 ORTHO05D009388 2.8e-17 93.6 263 38.8
HPP92_006947 Vanilla planifolia HOM05D007464 ORTHO05D009388 3.7e-17 93.2 264 31.1
HPP92_011796 Vanilla planifolia HOM05D007464 ORTHO05D009388 2.0e-15 87.4 263 29.3
RcHm_v2.0_Chr4g0395561 Rosa chinensis HOM05D007464 ORTHO05D009388 5.0e-14 82.8 104 49.0
Dinv11280 Davidia involucrata HOM05D007464 ORTHO05D009388 1.5e-07 61.2 241 34.0
SEGI_03126 Sequoiadendron giganteum HOM05D006239 ORTHO05D009388 4.5e-07 59.7 170 32.9


User provided reference genes

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