Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001982g0130 Nicotiana tabacum HOM05D000823 ORTHO05D000088 2.2e-102 375.6 178 100.0
Nitab4.5_0000380g0010 Nicotiana tabacum HOM05D000823 ORTHO05D000088 5.1e-75 284.6 207 72.5
Nitab4.5_0008897g0030 Nicotiana tabacum HOM05D000823 ORTHO05D000088 1.5e-50 203.4 183 63.9
PGSC0003DMG400005934 Solanum tuberosum HOM05D000823 ORTHO05D000088 2.8e-41 172.6 207 47.8
Sopen06g030390 Solanum pennellii HOM05D000823 ORTHO05D000088 2.4e-40 169.5 207 47.8
PGSC0003DMG400005893 Solanum tuberosum HOM05D000823 ORTHO05D000088 4.8e-33 145.2 198 42.4
Solyc06g074160.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 4.1e-32 142.1 198 42.9
Sopen06g030580 Solanum pennellii HOM05D000823 ORTHO05D000088 4.1e-32 142.1 198 42.9
Solyc06g073980.4 Solanum lycopersicum HOM05D000823 ORTHO05D000088 5.0e-30 135.2 160 49.4
Lj2A601G13 Lonicera japonica HOM05D000395 ORTHO05D000088 9.4e-13 77.8 217 27.6
Lj2C600G8 Lonicera japonica HOM05D000395 ORTHO05D000088 5.2e-11 72.0 215 28.4
RhsimUnG0104100 Rhododendron simsii HOM05D000395 ORTHO05D000088 5.2e-11 72.0 222 28.8
Lj2A564T41 Lonicera japonica HOM05D000395 ORTHO05D000088 7.4e-10 68.2 192 26.6
Lj2A565G28 Lonicera japonica HOM05D000395 ORTHO05D000088 1.3e-09 67.4 224 24.1
Gohir.A04G121800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.2e-09 66.6 102 37.3
Thecc.02G092500 Theobroma cacao HOM05D000395 ORTHO05D000088 8.2e-09 64.7 102 35.3
Gohir.D04G163100 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.1e-08 64.3 102 36.3
Gorai.012G151000 Gossypium raimondii HOM05D000395 ORTHO05D000088 1.1e-08 64.3 102 36.3
Duzib132G0290 Durio zibethinus HOM05D000395 ORTHO05D000088 5.3e-08 62.0 101 34.7
Sabra04G0084800 Salix brachista HOM05D000395 ORTHO05D000088 7.0e-08 61.6 101 32.7
Sabra04G0097200 Salix brachista HOM05D000395 ORTHO05D000088 7.0e-08 61.6 101 32.7
Potri.004G147000 Populus trichocarpa HOM05D000395 ORTHO05D000088 9.1e-08 61.2 101 33.7
COL.COLO4_11742 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.2e-07 60.8 102 37.3
Glyma.20G108000 Glycine max HOM05D000395 ORTHO05D000088 2.0e-07 60.1 92 38.0
RcHm_v2.0_Chr2g0103471 Rosa chinensis HOM05D000395 ORTHO05D000088 3.5e-07 59.3 92 30.4
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 4.5e-07 58.9 98 31.6
Eucgr.H02901 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.9e-07 58.5 122 28.7
Gohir.A13G036700 Gossypium hirsutum HOM05D000395 ORTHO05D000088 5.9e-07 58.5 102 33.3
Gohir.D13G035000 Gossypium hirsutum HOM05D000395 ORTHO05D000088 5.9e-07 58.5 102 33.3
Gorai.013G039700 Gossypium raimondii HOM05D000395 ORTHO05D000088 5.9e-07 58.5 102 33.3
Lj2A600T56 Lonicera japonica HOM05D000395 ORTHO05D000088 7.7e-07 58.2 219 23.3
QL11p039160 Quercus lobata HOM05D000395 ORTHO05D000088 7.7e-07 58.2 97 33.0
Thecc.02G092700 Theobroma cacao HOM05D000395 ORTHO05D000088 7.7e-07 58.2 84 35.7
Aqoxy2G00970 Aquilegia oxysepala HOM05D000395 ORTHO05D000088 1.0e-06 57.8 81 34.6
FvH4_1g14620 Fragaria vesca HOM05D000395 ORTHO05D000088 1.7e-06 57.0 123 28.5
Gohir.A12G068001 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.7e-06 57.0 127 29.9
Potri.004G147200 Populus trichocarpa HOM05D000395 ORTHO05D000088 1.7e-06 57.0 96 34.4
TWI75G0490 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 1.7e-06 57.0 96 35.4
Actinidia27928 Actinidia chinensis HOM05D000395 ORTHO05D000088 2.2e-06 56.6 102 34.3
TWI79G1437 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 2.9e-06 56.2 98 38.8
Lj4C136T19 Lonicera japonica HOM05D000395 ORTHO05D000088 3.8e-06 55.8 97 32.0
CSS0034604 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 5.0e-06 55.5 101 33.7
ClCG02G013090 Citrullus lanatus HOM05D000395 ORTHO05D000088 5.0e-06 55.5 104 31.7
FAN19G0713 Fragaria x ananassa HOM05D000395 ORTHO05D000088 5.0e-06 55.5 121 28.1
Gohir.A12G068300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 5.0e-06 55.5 115 35.7
VMungo0720G1896 Vigna mungo HOM05D000395 ORTHO05D000088 5.0e-06 55.5 85 32.9
Atru.chr5.2850 Acer truncatum HOM05D000395 ORTHO05D000088 6.5e-06 55.1 102 34.3
Migut.B00294 Erythranthe guttata HOM05D000823 ORTHO05D000088 6.5e-06 55.1 162 28.4
PSO541G4259 Papaver somniferum HOM05D000395 ORTHO05D000088 6.5e-06 55.1 99 34.3
Atru.chr5.2805 Acer truncatum HOM05D000395 ORTHO05D000088 8.5e-06 54.7 100 36.0


User provided reference genes

Program Settings