Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001973g0030 Nicotiana tabacum HOM05D000111 ORTHO05D011255 1.6e-131 472.6 223 100.0
Solyc04g058030.3 Solanum lycopersicum HOM05D000111 ORTHO05D011255 3.1e-74 282.3 293 48.5
Sopen04g025950 Solanum pennellii HOM05D000111 ORTHO05D011255 2.8e-62 242.7 307 41.4
PGSC0003DMG400034548 Solanum tuberosum HOM05D000111 ORTHO05D011255 1.9e-55 219.9 151 64.2
Solyc04g058060.3 Solanum lycopersicum HOM05D000111 ORTHO05D011255 7.3e-55 218.0 151 62.9
Sopen04g025980 Solanum pennellii HOM05D000111 ORTHO05D011255 7.3e-55 218.0 151 62.9
PGSC0003DMG400023021 Solanum tuberosum HOM05D000111 ORTHO05D011255 3.1e-53 212.6 151 62.9
PGSC0003DMG400043197 Solanum tuberosum HOM05D000111 ORTHO05D011255 1.2e-52 210.7 151 61.6
Sopen04g027180 Solanum pennellii HOM05D000111 ORTHO05D011255 4.3e-47 192.2 256 39.8
Nitab4.5_0000317g0180 Nicotiana tabacum HOM05D000111 ORTHO05D011255 8.1e-46 188.0 99 87.9
Nitab4.5_0000032g0190 Nicotiana tabacum HOM05D000111 ORTHO05D011255 2.7e-41 172.9 393 30.5
Nitab4.5_0000032g0330 Nicotiana tabacum HOM05D000111 ORTHO05D011255 1.7e-35 153.7 345 30.1
Nitab4.5_0003000g0070 Nicotiana tabacum HOM05D000111 ORTHO05D011255 6.0e-33 145.2 170 45.9
PGSC0003DMG400029117 Solanum tuberosum HOM05D000111 ORTHO05D011255 6.0e-33 145.2 166 44.0
Solyc04g051170.1 Solanum lycopersicum HOM05D000111 ORTHO05D011255 7.8e-33 144.8 157 43.9
Peaxi162Scf00823g00038 Petunia axillaris HOM05D000111 ORTHO05D011255 1.3e-27 127.5 157 41.4
Hma1.2p1_2567F.1_g324530 Hydrangea macrophylla HOM05D000111 ORTHO05D011255 1.7e-19 100.5 151 35.1
Hma1.2p1_2287F.1_g318930 Hydrangea macrophylla HOM05D000111 ORTHO05D011255 4.3e-15 85.9 104 38.5
Hma1.2p1_2781F.1_g328370 Hydrangea macrophylla HOM05D000111 ORTHO05D011255 5.6e-15 85.5 107 40.2
Aqoxy4G02056 Aquilegia oxysepala HOM05D000111 ORTHO05D001475 1.4e-13 80.9 159 30.2
Hma1.2p1_0752F.1_g212790 Hydrangea macrophylla HOM05D000111 ORTHO05D001475 6.9e-13 78.6 226 26.1
Nitab4.5_0000032g0350 Nicotiana tabacum HOM05D000111 ORTHO05D011255 2.0e-12 77.0 75 48.0
Nitab4.5_0000032g0360 Nicotiana tabacum HOM05D000111 ORTHO05D011255 2.2e-11 73.6 46 65.2
Hma1.2p1_0535F.1_g173830 Hydrangea macrophylla HOM05D000111 ORTHO05D001475 4.9e-11 72.4 104 38.5
COL.COLO4_21841 Corchorus olitorius HOM05D000111 ORTHO05D001475 3.2e-10 69.7 222 27.5
Psat7g011160 Pisum sativum HOM05D000111 ORTHO05D001475 1.6e-09 67.4 178 29.8
FvH4_2g09090 Fragaria vesca HOM05D000111 ORTHO05D001475 1.8e-08 63.9 107 34.6
Sp3g32730 Schrenkiella parvula HOM05D000111 ORTHO05D000134 2.3e-08 63.5 153 30.1
A05p04360 Brassica napus HOM05D000111 ORTHO05D000134 3.0e-08 63.2 155 30.3
C04p05130 Brassica napus HOM05D000111 ORTHO05D000134 3.0e-08 63.2 154 29.2
BolC4t22145H Brassica oleracea HOM05D000111 ORTHO05D000134 3.0e-08 63.2 154 29.2
Oeu004750.1 Olea europaea HOM05D000111 ORTHO05D000134 3.9e-08 62.8 160 25.0
BraA05t19418Z Brassica rapa HOM05D000111 ORTHO05D000134 5.1e-08 62.4 153 29.4
AL4G17940 Arabidopsis lyrata HOM05D000111 ORTHO05D000134 6.7e-08 62.0 146 28.1
Ca_13192_v3 Cicer arietinum L. HOM05D000111 ORTHO05D000134 6.7e-08 62.0 155 31.0
vmacro11022 Vaccinium macrocarpon HOM05D000111 ORTHO05D001334 6.7e-08 62.0 148 31.1
Carub.0007s1781 Capsella rubella HOM05D000111 ORTHO05D000134 8.7e-08 61.6 161 29.2
Cc01_g00080 Coffea canephora HOM05D000111 ORTHO05D000134 8.7e-08 61.6 161 26.1
QL05p060447 Quercus lobata HOM05D000111 ORTHO05D011255 8.7e-08 61.6 100 32.0
TAR374G0273 Trochodendron aralioides HOM05D000111 ORTHO05D001334 8.7e-08 61.6 156 29.5
Lalb_Chr11g0063071 Lupinus albus HOM05D000111 ORTHO05D000134 1.5e-07 60.8 165 29.1
SEGI_34674 Sequoiadendron giganteum HOM05D000111 ORTHO05D000134 1.5e-07 60.8 164 27.4
CARHR139400 Cardamine hirsuta HOM05D000111 ORTHO05D000134 1.9e-07 60.5 163 27.6
Thhalv10013632m.g Eutrema salsugineum HOM05D000111 ORTHO05D000134 1.9e-07 60.5 155 28.4
MBI01_g13087_MAGBIO Magnolia biondii HOM05D000111 ORTHO05D000134 1.9e-07 60.5 160 27.5
HanXRQChr15g0495751 Helianthus annuus HOM05D000111 ORTHO05D000134 2.5e-07 60.1 160 25.6
CANSAT11G0417 Cannabis sativa HOM05D000111 ORTHO05D000134 3.3e-07 59.7 158 29.1
Carub.0004s2682 Capsella rubella HOM05D000111 ORTHO05D000134 3.3e-07 59.7 165 29.1
PSO478G2985 Papaver somniferum HOM05D000111 ORTHO05D001475 3.3e-07 59.7 182 29.7
ECA233G3152 Erigeron canadensis HOM05D000111 ORTHO05D000134 4.3e-07 59.3 161 28.0
Peaxi162Scf00160g00039 Petunia axillaris HOM05D000111 ORTHO05D001334 5.7e-07 58.9 157 26.1
Carub.0004s1695 Capsella rubella HOM05D000111 ORTHO05D001475 7.4e-07 58.5 137 32.1
ClCG10G001670 Citrullus lanatus HOM05D000111 ORTHO05D007071 9.6e-07 58.2 130 28.5
Psat5g037440 Pisum sativum HOM05D000111 ORTHO05D000134 9.6e-07 58.2 140 30.7
CSS0049219 Camellia sinensis var. sinensis HOM05D000111 ORTHO05D000134 1.6e-06 57.4 161 24.8
MBI16_g31345_MAGBIO Magnolia biondii HOM05D000111 ORTHO05D000134 1.6e-06 57.4 172 26.7
PSO765G0133 Papaver somniferum HOM05D000111 ORTHO05D001475 1.6e-06 57.4 162 29.0
MBI16_g28440_MAGBIO Magnolia biondii HOM05D000111 ORTHO05D000134 2.1e-06 57.0 181 27.6
PSO765G0099 Papaver somniferum HOM05D000111 ORTHO05D001475 2.1e-06 57.0 108 34.3
QL05p016702 Quercus lobata HOM05D000111 ORTHO05D000134 2.1e-06 57.0 145 29.7
Actinidia14698 Actinidia chinensis HOM05D000111 ORTHO05D000134 2.8e-06 56.6 161 29.2
AL4G35450 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 2.8e-06 56.6 133 30.8
AL4G35480 Arabidopsis lyrata HOM05D000111 ORTHO05D001475 2.8e-06 56.6 133 30.8
Carub.0004s0890 Capsella rubella HOM05D000111 ORTHO05D000134 2.8e-06 56.6 145 29.0
CDE06G1890 Ceratophyllum demersum HOM05D000111 ORTHO05D000134 2.8e-06 56.6 174 24.1
Haze_15899 Corylus avellana HOM05D000111 ORTHO05D000134 2.8e-06 56.6 142 31.7
Psat1g115000 Pisum sativum HOM05D000111 ORTHO05D001475 2.8e-06 56.6 105 36.2
VMungo1309G1484 Vigna mungo HOM05D000111 ORTHO05D000134 2.8e-06 56.6 153 26.8
TAR636G1607 Trochodendron aralioides HOM05D000111 ORTHO05D001475 3.7e-06 56.2 157 24.8
COL.COLO4_03707 Corchorus olitorius HOM05D000111 ORTHO05D001475 4.8e-06 55.8 132 31.1
Cpa.g.sc42.102 Carica papaya HOM05D000111 ORTHO05D000134 6.3e-06 55.5 54 48.1
Hma1.2p1_2150F.1_g315220 Hydrangea macrophylla HOM05D000111 ORTHO05D000134 6.3e-06 55.5 247 23.1
PSO765G0088 Papaver somniferum HOM05D000111 ORTHO05D001475 6.3e-06 55.5 190 24.7
SHI17739 Sapria himalayana HOM05D000111 ORTHO05D000134 6.3e-06 55.5 142 31.0
PGSC0003DMG400036664 Solanum tuberosum HOM05D000111 ORTHO05D001334 6.3e-06 55.5 154 26.0
CSS0047427 Camellia sinensis var. sinensis HOM05D000111 ORTHO05D000134 8.2e-06 55.1 160 23.1
Dinv23418 Davidia involucrata HOM05D000111 ORTHO05D000134 8.2e-06 55.1 260 22.7
Sp4g26300 Schrenkiella parvula HOM05D000111 ORTHO05D000134 8.2e-06 55.1 162 27.8
SMO358G0488 Selaginella moellendorffii HOM05D000111 ORTHO05D000134 8.2e-06 55.1 166 29.5
HPP92_021229 Vanilla planifolia HOM05D000111 ORTHO05D000134 8.2e-06 55.1 154 25.3


User provided reference genes

Program Settings