Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 7.7e-46 186.8 95 100.0
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 3.6e-27 124.8 113 61.9
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 3.5e-22 108.2 105 56.2
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 2.2e-21 105.5 105 56.2
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 6.5e-21 104.0 109 53.2
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 8.5e-21 103.6 106 55.7
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 8.5e-21 103.6 116 53.4
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 1.9e-20 102.4 105 54.3
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 3.2e-20 101.7 105 55.2
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 3.2e-20 101.7 105 55.2
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 3.2e-20 101.7 104 56.7
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 4.2e-20 101.3 106 53.8
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 5.5e-20 100.9 106 52.8
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 7.2e-20 100.5 103 57.3
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 7.2e-20 100.5 106 53.8
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 9.4e-20 100.1 107 55.1
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 9.4e-20 100.1 107 54.2
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 9.4e-20 100.1 107 56.1
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 9.4e-20 100.1 107 51.4
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 1.2e-19 99.8 105 56.2
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 1.2e-19 99.8 105 53.3
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 1.6e-19 99.4 108 53.7
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 2.1e-19 99.0 105 55.2
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 2.1e-19 99.0 108 52.8
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 2.1e-19 99.0 103 56.3
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 2.1e-19 99.0 105 54.3
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 2.7e-19 98.6 103 55.3
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 2.7e-19 98.6 105 55.2
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.7e-19 98.6 106 52.8
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 2.7e-19 98.6 103 56.3
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 3.6e-19 98.2 106 53.8
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 3.6e-19 98.2 101 56.4
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 6.1e-19 97.4 107 51.4
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 6.1e-19 97.4 107 51.4
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 6.1e-19 97.4 107 54.2
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 8.0e-19 97.1 105 54.3
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 8.0e-19 97.1 104 53.8
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 1.4e-18 96.3 109 52.3
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 1.4e-18 96.3 107 51.4
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 1.4e-18 96.3 103 55.3
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 1.8e-18 95.9 111 52.3
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 1.8e-18 95.9 103 53.4
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.8e-18 95.9 101 54.5
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 2.3e-18 95.5 103 54.4
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 3.0e-18 95.1 99 56.6
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 3.0e-18 95.1 103 54.4
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 4.0e-18 94.7 112 52.7
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 4.0e-18 94.7 105 52.4
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 5.2e-18 94.4 102 52.9
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 5.2e-18 94.4 103 53.4
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 5.2e-18 94.4 104 53.8
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 5.2e-18 94.4 103 54.4
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 6.8e-18 94.0 103 53.4
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 6.8e-18 94.0 111 54.1
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 8.8e-18 93.6 109 49.5
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 8.8e-18 93.6 104 53.8
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 8.8e-18 93.6 116 50.0
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 1.2e-17 93.2 113 47.8
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 1.2e-17 93.2 106 53.8
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 1.5e-17 92.8 110 50.9
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.5e-17 92.8 111 52.3
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 2.0e-17 92.4 103 52.4
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 2.0e-17 92.4 103 52.4
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 2.6e-17 92.0 103 53.4
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 3.4e-17 91.7 103 53.4
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 3.4e-17 91.7 110 53.6
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 3.4e-17 91.7 114 50.0
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 3.4e-17 91.7 106 49.1
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 5.7e-17 90.9 106 51.9
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 5.7e-17 90.9 112 50.0
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 7.5e-17 90.5 106 50.0
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 9.8e-17 90.1 101 53.5
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 1.3e-16 89.7 117 47.0
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 1.3e-16 89.7 103 51.5
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 2.2e-16 89.0 111 49.5
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 2.2e-16 89.0 102 52.0
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 2.8e-16 88.6 61 72.1
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 6.3e-16 87.4 123 44.7
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 8.3e-16 87.0 105 48.6
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 1.8e-15 85.9 64 65.6
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 5.4e-15 84.3 106 47.2
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 1.2e-14 83.2 61 65.6
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 2.7e-14 82.0 107 46.7
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 2.7e-14 82.0 112 45.5
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 5.9e-14 80.9 61 67.2
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 5.9e-14 80.9 104 48.1
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 1.0e-13 80.1 61 63.9
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 1.7e-13 79.3 64 60.9
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 3.8e-13 78.2 100 49.0
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 3.8e-13 78.2 59 66.1
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 5.0e-13 77.8 64 62.5
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 6.5e-13 77.4 104 46.2
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 8.6e-13 77.0 61 63.9
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 8.6e-13 77.0 61 63.9
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 8.6e-13 77.0 61 63.9
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 8.6e-13 77.0 61 63.9
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 1.1e-12 76.6 104 48.1
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 1.9e-12 75.9 69 56.5
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 2.5e-12 75.5 64 59.4
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 3.2e-12 75.1 61 63.9
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 3.6e-11 71.6 67 59.7
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 2.6e-09 65.5 61 62.3
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 2.6e-09 65.5 105 40.0
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 1.3e-08 63.2 61 60.7
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 9.2e-07 57.0 44 59.1


User provided reference genes

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