Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 2.0e-158 562.4 286 100.0
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 7.2e-140 500.7 290 90.0
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 7.3e-100 367.9 296 71.3
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 7.8e-94 347.8 296 68.6
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 2.3e-93 346.3 296 66.9
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 1.8e-82 310.1 276 67.4
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 2.9e-24 116.7 296 33.4
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 1.8e-18 97.4 290 34.5
Nitab4.5_0000322g0150 Nicotiana tabacum HOM05D010455 ORTHO05D010927 1.6e-17 94.4 69 69.6
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 9.8e-12 75.1 297 28.6
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 2.4e-10 70.5 56 62.5
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 3.1e-10 70.1 53 64.2
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 3.1e-10 70.1 47 70.2
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 3.1e-10 70.1 59 55.9
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 4.1e-10 69.7 118 40.7
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 5.4e-10 69.3 43 74.4
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 5.4e-10 69.3 61 57.4
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 1.6e-09 67.8 34 82.4
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 1.6e-09 67.8 34 82.4
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 2.0e-09 67.4 69 52.2
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 3.5e-09 66.6 290 27.9
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 5.9e-09 65.9 67 49.3
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 5.9e-09 65.9 79 48.1
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 5.9e-09 65.9 79 48.1
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 7.8e-09 65.5 85 47.1
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 3.8e-08 63.2 62 50.0
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 3.8e-08 63.2 86 44.2
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 5.0e-08 62.8 287 25.1
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 1.9e-07 60.8 35 74.3
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 3.3e-07 60.1 293 27.3
Ah.06g190030 Amaranthus hybridus HOM05D031177 ORTHO05D026471 7.3e-07 58.9 49 59.2
FAN05G0049 Fragaria x ananassa HOM05D023588 ORTHO05D025400 7.3e-07 58.9 72 50.0
Sc16g0008660 Simmondsia chinensis HOM05D031177 ORTHO05D026471 1.2e-06 58.2 156 33.3
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 2.1e-06 57.4 35 71.4
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 2.8e-06 57.0 89 40.4
AUR62005244 Chenopodium quinoa HOM05D031177 ORTHO05D026471 6.1e-06 55.8 55 58.2


User provided reference genes

Program Settings