Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001955g0180 Nicotiana tabacum HOM05D007882 ORTHO05D009870 1.6e-79 299.3 141 100.0
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 1.8e-59 232.6 113 93.8
CAN.G529.52 Capsicum annuum HOM05D007882 ORTHO05D009870 1.8e-54 216.1 112 83.9
Solyc02g077700.1 Solanum lycopersicum HOM05D007882 ORTHO05D009870 1.1e-51 206.8 112 83.0
CiPaw.10G052500 Carya illinoinensis HOM05D007882 ORTHO05D009870 5.8e-50 201.1 111 79.3
Duzib235G1325 Durio zibethinus HOM05D007882 ORTHO05D009870 9.9e-50 200.3 112 75.9
Manes.17G049100 Manihot esculenta HOM05D007882 ORTHO05D009870 9.9e-50 200.3 112 79.5
PGSC0003DMG400031764 Solanum tuberosum HOM05D007882 ORTHO05D009870 9.9e-50 200.3 112 80.4
Manes.16G031800 Manihot esculenta HOM05D007882 ORTHO05D009870 8.4e-49 197.2 112 76.8
Potri.004G048400 Populus trichocarpa HOM05D007882 ORTHO05D009870 8.4e-49 197.2 112 78.6
TWI38G0780 Tripterygium wilfordii HOM05D007882 ORTHO05D009870 1.4e-48 196.4 113 74.3
CSS0041544 Camellia sinensis var. sinensis HOM05D007882 ORTHO05D009870 3.2e-48 195.3 112 75.9
Atru.chr10.1801 Acer truncatum HOM05D007882 ORTHO05D009870 4.2e-48 194.9 112 75.9
QL05p042203 Quercus lobata HOM05D007882 ORTHO05D009870 4.2e-48 194.9 114 75.4
Prupe.4G052300 Prunus persica HOM05D007882 ORTHO05D009870 9.3e-48 193.7 112 75.0
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 2.1e-47 192.6 111 75.7
COL.COLO4_31420 Corchorus olitorius HOM05D007882 ORTHO05D009870 2.7e-47 192.2 112 74.1
Cfa000524 Carpinus fangiana HOM05D007882 ORTHO05D009870 3.5e-47 191.8 111 75.7
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 3.5e-47 191.8 117 74.4
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 6.0e-47 191.0 112 75.9
Thecc.06G181400 Theobroma cacao HOM05D007882 ORTHO05D009870 1.8e-46 189.5 113 70.8
CANSAT35G1953 Cannabis sativa HOM05D007882 ORTHO05D009870 2.3e-46 189.1 111 73.9
Gohir.A05G159200 Gossypium hirsutum HOM05D007882 ORTHO05D009870 3.9e-46 188.3 112 70.5
Gorai.009G166900 Gossypium raimondii HOM05D007882 ORTHO05D009870 3.9e-46 188.3 112 70.5
Nn1g06425 Nelumbo nucifera HOM05D007882 ORTHO05D009870 1.9e-45 186.0 114 72.8
MD10G1289500 Malus domestica HOM05D007882 ORTHO05D009870 5.6e-45 184.5 110 72.7
Cc02_g13810 Coffea canephora HOM05D007882 ORTHO05D009870 9.6e-45 183.7 111 73.0
FvH4_3g08670 Fragaria vesca HOM05D007882 ORTHO05D009870 1.6e-44 183.0 113 71.7
PSO210G4689 Papaver somniferum HOM05D007882 ORTHO05D009870 2.1e-44 182.6 112 72.3
FAN16G0532 Fragaria x ananassa HOM05D007882 ORTHO05D009870 6.2e-44 181.0 113 70.8
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 6.2e-44 181.0 113 70.8
Rhsim02G0134400 Rhododendron simsii HOM05D007882 ORTHO05D009870 6.2e-44 181.0 112 68.8
FAN11G2645 Fragaria x ananassa HOM05D007882 ORTHO05D009870 1.4e-43 179.9 113 69.9
PSO210G1466 Papaver somniferum HOM05D007882 ORTHO05D009870 1.4e-43 179.9 113 71.7
TAR627G1093 Trochodendron aralioides HOM05D007882 ORTHO05D009870 2.4e-43 179.1 112 69.6
RcHm_v2.0_Chr5g0009121 Rosa chinensis HOM05D007882 ORTHO05D009870 5.3e-43 177.9 112 70.5
Gohir.D05G161900 Gossypium hirsutum HOM05D007882 ORTHO05D009870 9.0e-43 177.2 106 70.8
Ciclev10017073m.g Citrus clementina HOM05D007882 ORTHO05D009870 4.5e-42 174.9 111 64.9
ClCG00G004760 Citrullus lanatus HOM05D007882 ORTHO05D009870 6.5e-41 171.0 111 66.7
ClCG01G023240 Citrullus lanatus HOM05D007882 ORTHO05D009870 6.5e-41 171.0 111 66.7
MELO3C007262.2 Cucumis melo HOM05D007882 ORTHO05D009870 8.4e-41 170.6 111 65.8
CsaV3_6G050400 Cucumis sativus L. HOM05D007882 ORTHO05D009870 8.4e-41 170.6 111 65.8
TPR.G789 Trifolium pratense HOM05D007882 ORTHO05D009870 8.4e-41 170.6 112 67.0
arahy.Tifrunner.gnm1.ann1.CPZJ30 Arachis hypogaea HOM05D007882 ORTHO05D009870 1.4e-40 169.9 113 66.4
Medtr2g014430 Medicago truncatula HOM05D007882 ORTHO05D009870 7.1e-40 167.5 112 65.2
Oeu012151.1 Olea europaea HOM05D007882 ORTHO05D009870 2.7e-39 165.6 112 62.5
Psat1g202760 Pisum sativum HOM05D007882 ORTHO05D009870 2.7e-39 165.6 112 63.4
Aqoxy4G00631 Aquilegia oxysepala HOM05D007882 ORTHO05D009870 6.7e-38 161.0 114 63.2
Lalb_Chr18g0059401 Lupinus albus HOM05D007882 ORTHO05D009870 8.7e-38 160.6 112 63.4
Lj6g0021640 Lotus japonicus HOM05D007882 ORTHO05D009870 1.1e-37 160.2 113 61.9
SGA_v2.0_scaffold22G09668 Striga asiatica HOM05D007882 ORTHO05D009870 3.3e-37 158.7 111 61.3
SalBow8G2967 Salvia bowleyana HOM05D007882 ORTHO05D009870 2.1e-36 156.0 112 58.0
SalBow8G3626 Salvia bowleyana HOM05D007882 ORTHO05D009870 2.1e-36 156.0 112 58.0
Migut.M01110 Erythranthe guttata HOM05D007882 ORTHO05D009870 1.4e-35 153.3 113 58.4
Aa31LG9G13760 Aethionema arabicum HOM05D007882 ORTHO05D009870 3.1e-35 152.1 111 56.8
Glyma.13G235900 Glycine max HOM05D007882 ORTHO05D009870 3.1e-35 152.1 112 61.6
Sed0022369 Sechium edule HOM05D007882 ORTHO05D009870 3.1e-35 152.1 113 59.3
Eucgr.D00598 Eucalyptus grandis HOM05D007882 ORTHO05D009870 5.3e-35 151.4 112 58.0
Sp4g16270 Schrenkiella parvula HOM05D007882 ORTHO05D009870 9.0e-35 150.6 114 57.9
BolC4t27817H Brassica oleracea HOM05D007882 ORTHO05D009870 1.2e-34 150.2 114 57.9
Thhalv10017644m.g Eutrema salsugineum HOM05D007882 ORTHO05D009870 1.2e-34 150.2 113 59.3
PGR004G2459 Punica granatum HOM05D007882 ORTHO05D009870 1.2e-34 150.2 113 58.4
C04p63420 Brassica napus HOM05D007882 ORTHO05D009870 3.4e-34 148.7 114 57.0
Phvul.006G182500 Phaseolus vulgaris HOM05D007882 ORTHO05D009870 7.6e-34 147.5 112 56.2
ATR0789G148 Amborella trichopoda HOM05D007882 ORTHO05D009870 1.0e-33 147.1 112 58.0
A04p26080 Brassica napus HOM05D007882 ORTHO05D009870 1.3e-33 146.7 114 56.1
BraA04t18110Z Brassica rapa HOM05D007882 ORTHO05D009870 1.3e-33 146.7 114 56.1
THA.LOC104820567 Tarenaya hassleriana HOM05D007882 ORTHO05D009870 1.7e-33 146.4 112 59.8
Nn1g04229 Nelumbo nucifera HOM05D007882 ORTHO05D009870 3.8e-33 145.2 104 66.3
unitig_22.g6219 Utricularia gibba HOM05D007882 ORTHO05D009870 1.1e-32 143.7 111 57.7
DCAR_028056 Daucus carota HOM05D007882 ORTHO05D009870 1.4e-32 143.3 117 58.1
AL4G29660 Arabidopsis lyrata HOM05D007882 ORTHO05D009870 7.2e-32 141.0 113 55.8
CARHR128020 Cardamine hirsuta HOM05D007882 ORTHO05D009870 3.6e-31 138.7 113 54.9
HanXRQChr01g0014401 Helianthus annuus HOM05D007882 ORTHO05D009870 1.0e-30 137.1 113 55.8
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.3e-30 136.7 111 55.0
AT2G33855 Arabidopsis thaliana HOM05D007882 ORTHO05D009870 1.5e-29 133.3 113 54.0
Carub.0004s1556 Capsella rubella HOM05D007882 ORTHO05D009870 1.9e-29 132.9 113 54.9
MBI04_g06226_MAGBIO Magnolia biondii HOM05D007882 ORTHO05D009870 2.5e-29 132.5 99 59.6
Ah.14g089690 Amaranthus hybridus HOM05D007882 ORTHO05D009870 3.8e-25 118.6 84 60.7
QL06p028733 Quercus lobata HOM05D007882 ORTHO05D009870 1.9e-24 116.3 91 67.0
HPP92_022798 Vanilla planifolia HOM05D007882 ORTHO05D009870 3.2e-24 115.5 110 46.4
Os04g0475300 Oryza sativa ssp. japonica HOM05D007882 ORTHO05D009870 2.0e-18 96.3 111 43.2
Zm00001eb079820 Zea mays HOM05D007882 ORTHO05D009870 1.3e-17 93.6 115 41.7
Cpa.g.sc27.7 Carica papaya HOM05D007882 ORTHO05D009870 5.7e-13 78.2 46 69.6
BcaC02g07777 Brassica carinata HOM05D007882 ORTHO05D009870 4.7e-07 58.5 36 61.1


User provided reference genes

Program Settings