Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.5e-126 454.9 218 100.0
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.5e-76 290.0 293 57.7
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 8.4e-72 274.2 270 58.9
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 2.7e-62 242.7 245 58.4
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.4e-58 230.3 255 54.1
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.6e-51 206.8 218 55.0
Sopen00g002560 Solanum pennellii HOM05D008923 ORTHO05D011423 6.0e-46 188.3 95 93.7
Nitab4.5_0008578g0050 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.4e-42 177.2 183 57.4
FAN20G1591 Fragaria x ananassa HOM05D008923 ORTHO05D011423 5.0e-40 168.7 95 85.3
HanXRQMTg0579461 Helianthus annuus HOM05D008923 ORTHO05D011423 6.1e-38 161.8 92 84.8
A04p09550 Brassica napus HOM05D008466 ORTHO05D010817 3.7e-35 152.5 84 90.5
BolSC28t60321H Brassica oleracea HOM05D008466 ORTHO05D010817 3.7e-35 152.5 84 90.5
BraSC48t46287Z Brassica rapa HOM05D008466 ORTHO05D010817 3.7e-35 152.5 84 90.5
BraSC48t46336Z Brassica rapa HOM05D008466 ORTHO05D010817 3.7e-35 152.5 84 90.5
VMungo0565G0002 Vigna mungo HOM05D008923 ORTHO05D011423 8.2e-35 151.4 106 74.5
CiPaw.11G081100 Carya illinoinensis HOM05D008466 ORTHO05D010817 3.1e-34 149.4 83 90.4
Potri.007G062442 Populus trichocarpa HOM05D008466 ORTHO05D010817 9.1e-34 147.9 86 88.4
LjContig00315g0013151 Lotus japonicus HOM05D008466 ORTHO05D010817 1.0e-32 144.4 84 86.9
Lalb_Chr00c21g0406001 Lupinus albus HOM05D008466 ORTHO05D010817 1.0e-32 144.4 84 86.9
Lalb_Chr00c39g0409011 Lupinus albus HOM05D008466 ORTHO05D010817 1.0e-32 144.4 84 86.9
Lalb_Chr00c39g0409191 Lupinus albus HOM05D008466 ORTHO05D010817 1.0e-32 144.4 84 86.9
Lalb_Chr18g0049571 Lupinus albus HOM05D008466 ORTHO05D010817 1.0e-32 144.4 84 86.9
TPR.G7441 Trifolium pratense HOM05D008466 ORTHO05D010817 1.0e-32 144.4 84 86.9
Nitab4.5_0000580g0160 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.8e-32 142.5 114 67.5
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 5.0e-32 142.1 199 44.2
ATMG00285 Arabidopsis thaliana HOM05D008466 ORTHO05D010817 2.1e-30 136.7 192 47.9
Zm00001eb187490 Zea mays HOM05D008466 ORTHO05D010817 6.1e-30 135.2 89 78.7
Zm00001eb436220 Zea mays HOM05D008466 ORTHO05D010817 6.1e-30 135.2 89 78.7
Zm00001eb436270 Zea mays HOM05D008466 ORTHO05D010817 6.1e-30 135.2 89 78.7
Zm00001eb436350 Zea mays HOM05D008466 ORTHO05D010817 6.1e-30 135.2 89 78.7
Zm00001eb436460 Zea mays HOM05D008466 ORTHO05D010817 6.1e-30 135.2 89 78.7
Zm00001eb436500 Zea mays HOM05D008466 ORTHO05D010817 6.1e-30 135.2 89 78.7
Nitab4.5_0002325g0090 Nicotiana tabacum HOM05D008466 ORTHO05D010817 2.3e-29 133.3 220 41.8
SGA_v2.0_scaffold477G52174 Striga asiatica HOM05D008923 ORTHO05D016904 3.9e-29 132.5 80 81.2
Glyma.01G136900 Glycine max HOM05D008466 ORTHO05D010817 7.4e-28 128.3 83 77.1
RhsimMtG0002900 Rhododendron simsii HOM05D008923 ORTHO05D011423 1.7e-27 127.1 74 83.8
VMungo0565G0006 Vigna mungo HOM05D008466 ORTHO05D010817 1.7e-27 127.1 76 85.5
SalBow1G0863 Salvia bowleyana HOM05D008466 ORTHO05D010817 1.4e-26 124.0 76 84.2
RcHm_v2.0_MTg0498181 Rosa chinensis HOM05D008466 ORTHO05D010817 5.3e-26 122.1 66 92.4
Psat0s2778g0120 Pisum sativum HOM05D008923 ORTHO05D011423 3.4e-25 119.4 86 73.3
Medtr8g059750 Medicago truncatula HOM05D008466 ORTHO05D010817 8.5e-24 114.8 66 87.9
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 1.1e-23 114.4 76 78.9
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 9.4e-23 111.3 66 86.4
Medtr2g040780 Medicago truncatula HOM05D008466 ORTHO05D010817 1.0e-21 107.8 65 84.6
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 2.3e-21 106.7 59 84.7
arahy.Tifrunner.gnm1.ann1.48KRUQ Arachis hypogaea HOM05D008466 ORTHO05D010817 8.8e-21 104.8 65 83.1
Ca_04597_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013768 1.1e-20 104.4 78 70.5
Nitab4.5_0001796g0330 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.3e-20 102.8 155 44.5
Hund22926 Selenicereus undatus HOM05D002729 ORTHO05D003163 9.7e-20 101.3 77 71.4
arahy.Tifrunner.gnm1.ann1.GWEJ34 Arachis hypogaea HOM05D008466 ORTHO05D010817 1.3e-19 100.9 58 87.9
FvH4_c1g00520 Fragaria vesca HOM05D008923 ORTHO05D011423 3.7e-19 99.4 54 88.9
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 1.8e-18 97.1 53 86.8
Actinidia34868 Actinidia chinensis HOM05D041439 ORTHO05D011423 2.4e-18 96.7 52 86.5
Nitab4.5_0000172g2090 Nicotiana tabacum HOM05D008466 ORTHO05D011423 9.1e-18 94.7 56 82.1
SalBow1G1510 Salvia bowleyana HOM05D008923 ORTHO05D011423 3.8e-16 89.4 67 68.7
BolSC28t60423H Brassica oleracea HOM05D008466 ORTHO05D010817 1.5e-15 87.4 54 79.6
Nitab4.5_0000925g0100 Nicotiana tabacum HOM05D008466 ORTHO05D011423 2.5e-15 86.7 44 88.6
CAN.G993.35 Capsicum annuum HOM05D000924 ORTHO05D001209 3.2e-15 86.3 51 82.4
MBI08_g16748_MAGBIO Magnolia biondii HOM05D008923 ORTHO05D011423 4.2e-15 85.9 54 75.9
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 1.6e-14 84.0 85 52.9
ATR0480G001 Amborella trichopoda HOM05D008923 ORTHO05D011423 4.7e-14 82.4 54 75.9
BraSC48t46301Z Brassica rapa HOM05D008466 ORTHO05D010817 2.6e-12 76.6 44 81.8
Gorai.001G167700 Gossypium raimondii HOM05D008466 ORTHO05D010817 2.2e-11 73.6 49 73.5
Gohir.D08G087750 Gossypium hirsutum HOM05D008923 ORTHO05D011423 2.8e-11 73.2 43 81.4
Gohir.D02G091950 Gossypium hirsutum HOM05D008923 ORTHO05D011423 1.6e-09 67.4 65 58.5
Nitab4.5_0001796g0310 Nicotiana tabacum HOM05D008923 ORTHO05D011423 4.5e-09 65.9 34 91.2
Gorai.005G103300 Gossypium raimondii HOM05D008923 ORTHO05D011423 7.7e-09 65.1 39 79.5
Nitab4.5_0000925g0080 Nicotiana tabacum HOM05D008923 ORTHO05D011423 2.2e-08 63.5 29 96.6
Lsat_1_v5_gn_2_129581 Lactuca sativa HOM05D000580 ORTHO05D011423 4.2e-07 59.3 46 63.0
Carub.0006s2655 Capsella rubella HOM05D008466 ORTHO05D010817 8.0e-06 55.1 36 77.8
SHI26553 Sapria himalayana HOM05D008923 ORTHO05D011423 8.0e-06 55.1 29 86.2


User provided reference genes

Program Settings