Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001940g0010 Nicotiana tabacum HOM05D003486 ORTHO05D004600 2.9e-44 181.4 87 100.0
Nitab4.5_0001263g0030 Nicotiana tabacum HOM05D003486 ORTHO05D004600 9.5e-43 176.4 87 96.6
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 1.7e-36 155.6 82 86.6
CAN.G336.8 Capsicum annuum HOM05D003486 ORTHO05D004600 8.6e-36 153.3 79 91.1
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 6.8e-33 143.7 82 80.5
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 1.5e-32 142.5 78 85.9
Hma1.2p1_0847F.1_g227860 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 7.5e-32 140.2 82 78.0
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 7.5e-32 140.2 82 78.0
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 1.7e-31 139.0 82 76.8
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 1.1e-30 136.3 78 82.1
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 1.1e-30 136.3 78 82.1
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 9.2e-30 133.3 82 78.0
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 9.2e-30 133.3 82 75.6
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 9.2e-30 133.3 82 74.4
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 2.1e-29 132.1 82 74.4
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 2.1e-29 132.1 77 80.5
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 3.5e-29 131.3 81 79.0
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 6.0e-29 130.6 81 75.3
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 1.0e-28 129.8 81 74.1
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 1.7e-28 129.0 78 78.2
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 1.7e-28 129.0 82 73.2
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 3.9e-28 127.9 78 75.6
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 1.1e-27 126.3 82 72.0
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 1.1e-27 126.3 78 75.6
GSVIVG01010755001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.1e-27 126.3 78 75.6
DCAR_023939 Daucus carota HOM05D003486 ORTHO05D004600 1.5e-27 125.9 79 73.4
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 1.9e-27 125.6 78 73.1
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 1.9e-27 125.6 82 70.7
CiPaw.01G100300 Carya illinoinensis HOM05D003486 ORTHO05D004600 2.5e-27 125.2 82 69.5
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 3.3e-27 124.8 82 70.7
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 3.3e-27 124.8 82 72.0
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 4.3e-27 124.4 78 74.4
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 5.6e-27 124.0 82 73.2
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 5.6e-27 124.0 78 75.6
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 5.6e-27 124.0 81 72.8
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 5.6e-27 124.0 78 75.6
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 9.5e-27 123.2 83 71.1
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 9.5e-27 123.2 78 73.1
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 9.5e-27 123.2 78 75.6
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 9.5e-27 123.2 82 69.5
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 9.5e-27 123.2 82 68.3
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.6e-26 122.5 78 71.8
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.6e-26 122.5 78 74.4
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 2.8e-26 121.7 83 71.1
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 2.8e-26 121.7 78 71.8
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 3.6e-26 121.3 83 69.9
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 3.6e-26 121.3 78 70.5
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 4.7e-26 120.9 78 67.9
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 8.1e-26 120.2 85 69.4
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 1.1e-25 119.8 79 72.2
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 1.1e-25 119.8 83 69.9
Haze_01510 Corylus avellana HOM05D003486 ORTHO05D004600 1.1e-25 119.8 80 72.5
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 1.1e-25 119.8 83 68.7
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.4e-25 119.4 83 68.7
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 1.4e-25 119.4 77 72.7
FAN07G1795 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.4e-25 119.4 81 70.4
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 1.4e-25 119.4 83 68.7
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 1.8e-25 119.0 83 68.7
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 5.2e-25 117.5 81 69.1
Nn1g09587 Nelumbo nucifera HOM05D003486 ORTHO05D004600 1.2e-24 116.3 77 74.0
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 2.0e-24 115.5 86 68.6
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 2.0e-24 115.5 86 68.6
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 2.0e-24 115.5 86 68.6
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 2.0e-24 115.5 86 68.6
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 2.6e-24 115.2 77 68.8
Eucgr.L02279 Eucalyptus grandis HOM05D003486 ORTHO05D004600 3.4e-24 114.8 76 71.1
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 1.7e-23 112.5 81 60.5
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 1.7e-23 112.5 78 67.9
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 2.2e-23 112.1 78 66.7
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 4.9e-23 110.9 78 65.4
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 2.4e-22 108.6 77 70.1
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 2.4e-22 108.6 77 70.1
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 3.5e-21 104.8 81 63.0
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 3.0e-20 101.7 116 47.4
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 6.6e-20 100.5 63 73.0
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 6.6e-20 100.5 78 64.1
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 1.2e-18 96.3 78 60.3
HPP92_023710 Vanilla planifolia HOM05D003486 ORTHO05D004600 1.1e-17 93.2 78 60.3
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.8e-17 92.4 77 55.8
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.8e-17 92.4 77 55.8
Os04g0492500 Oryza sativa ssp. japonica HOM05D003486 ORTHO05D004600 5.2e-17 90.9 78 57.7
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 1.7e-15 85.9 74 54.1
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 1.7e-15 85.9 49 81.6
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 3.8e-15 84.7 81 51.9
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 4.9e-15 84.3 49 79.6
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 4.2e-14 81.3 78 55.1
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 1.6e-13 79.3 55 63.6
SEGI_39220 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 3.0e-12 75.1 59 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 8.7e-12 73.6 78 48.7
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 4.8e-10 67.8 82 48.8
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 3.1e-09 65.1 81 42.0
Ah.07g202020 Amaranthus hybridus HOM05D003486 ORTHO05D004600 6.9e-09 63.9 66 50.0


User provided reference genes

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