Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 8.1e-140 500.4 245 100.0
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 9.6e-133 476.9 242 95.0
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 9.0e-107 390.6 223 85.7
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 7.2e-96 354.4 221 76.9
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.1e-93 347.1 223 74.9
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 3.7e-92 342.0 194 79.4
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 3.8e-89 332.0 225 68.4
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 9.7e-85 317.4 220 66.4
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 4.1e-83 312.0 210 67.6
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 5.0e-81 305.1 220 67.3
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 6.5e-81 304.7 215 66.5
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 3.2e-80 302.4 217 68.2
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 7.9e-79 297.7 211 64.5
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 2.6e-77 292.7 211 64.9
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 5.7e-77 291.6 220 62.3
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 2.8e-76 289.3 229 60.3
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 5.3e-75 285.0 206 63.6
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 5.3e-75 285.0 221 61.1
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 5.3e-75 285.0 213 62.4
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.6e-74 282.7 221 60.6
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 3.8e-73 278.9 227 56.8
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.9e-72 276.6 232 58.2
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 3.2e-72 275.8 216 60.2
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 1.6e-71 273.5 206 61.7
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 2.7e-71 272.7 208 61.5
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 8.0e-71 271.2 191 63.9
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 1.4e-70 270.4 218 57.8
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 3.0e-70 269.2 223 59.2
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 3.0e-70 269.2 222 59.9
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 4.0e-70 268.9 210 61.4
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 5.2e-70 268.5 199 61.8
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 6.7e-70 268.1 216 59.3
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 6.7e-70 268.1 218 58.3
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 8.8e-70 267.7 225 57.3
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 1.2e-69 267.3 211 59.7
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.5e-69 266.9 189 63.0
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 1.5e-69 266.9 188 63.8
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 2.0e-69 266.5 212 59.4
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 2.6e-69 266.2 211 59.7
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 3.3e-69 265.8 215 59.1
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 3.3e-69 265.8 218 58.3
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 5.7e-69 265.0 217 58.1
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.3e-68 263.8 222 61.3
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 1.3e-68 263.8 220 56.8
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.7e-68 263.5 207 61.4
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.7e-68 263.5 213 59.2
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.7e-68 263.5 213 59.2
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 2.2e-68 263.1 207 60.9
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 3.7e-68 262.3 212 59.4
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 3.7e-68 262.3 219 58.9
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 6.3e-68 261.5 219 58.0
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 8.2e-68 261.2 219 58.0
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 1.8e-67 260.0 216 57.4
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 1.8e-67 260.0 218 56.4
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 3.1e-67 259.2 219 57.5
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 5.3e-67 258.5 206 61.2
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 5.3e-67 258.5 212 59.9
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 1.2e-66 257.3 202 61.4
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 2.0e-66 256.5 220 58.2
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.7e-66 256.1 209 56.9
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.7e-66 256.1 209 56.9
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 4.5e-66 255.4 217 56.2
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 1.0e-65 254.2 219 55.3
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 1.0e-65 254.2 211 56.4
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 1.3e-65 253.8 203 58.6
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 1.3e-65 253.8 223 57.0
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 1.3e-65 253.8 216 56.9
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 1.7e-65 253.4 216 56.9
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 3.8e-65 252.3 200 59.5
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 5.0e-65 251.9 219 56.2
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 5.0e-65 251.9 217 55.3
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 8.5e-65 251.1 216 56.9
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 1.5e-64 250.4 202 59.4
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 2.5e-64 249.6 191 59.2
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 2.5e-64 249.6 212 57.5
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 2.5e-64 249.6 221 55.7
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 3.2e-64 249.2 207 58.5
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 4.2e-64 248.8 211 56.4
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 5.5e-64 248.4 213 57.7
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 5.5e-64 248.4 213 57.3
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 1.2e-63 247.3 220 55.0
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 1.6e-63 246.9 213 55.4
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 1.6e-63 246.9 211 56.9
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 2.7e-63 246.1 210 56.2
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 3.6e-63 245.7 219 52.1
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 3.6e-63 245.7 221 54.3
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 4.7e-63 245.4 226 54.9
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 8.0e-63 244.6 212 55.2
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 1.4e-62 243.8 220 53.6
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 1.4e-62 243.8 210 55.7
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 2.3e-62 243.0 212 55.2
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 2.3e-62 243.0 213 54.9
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 2.3e-62 243.0 213 54.9
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 5.2e-62 241.9 232 51.3
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 5.2e-62 241.9 229 50.7
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 6.8e-62 241.5 205 54.6
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 8.8e-62 241.1 208 56.2
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 8.8e-62 241.1 224 53.1
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 1.5e-61 240.4 216 55.1
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 3.4e-61 239.2 218 49.1
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 3.4e-61 239.2 240 50.4
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 4.4e-61 238.8 212 54.2
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 7.5e-61 238.0 211 55.5
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 9.8e-61 237.7 245 51.0
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 9.8e-61 237.7 193 57.0
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 1.3e-60 237.3 229 50.7
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 1.3e-60 237.3 207 54.6
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.8e-60 236.1 211 52.1
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 4.8e-60 235.3 172 61.6
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 8.3e-60 234.6 231 51.1
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 8.3e-60 234.6 232 50.9
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 8.3e-60 234.6 215 52.6
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 1.1e-59 234.2 218 52.3
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 1.8e-59 233.4 219 54.3
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.8e-59 233.4 218 50.9
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.8e-59 233.4 212 53.3
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 4.1e-59 232.3 216 52.8
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 7.0e-59 231.5 218 54.1
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 9.1e-59 231.1 218 50.9
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 1.2e-58 230.7 218 51.4
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 1.6e-58 230.3 218 51.4
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 1.6e-58 230.3 222 50.9
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 1.6e-58 230.3 210 50.5
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 4.5e-58 228.8 195 53.3
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 5.9e-58 228.4 218 50.0
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 5.9e-58 228.4 212 52.4
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 5.9e-58 228.4 218 51.4
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 5.9e-58 228.4 191 55.0
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 5.9e-58 228.4 211 54.0
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 5.9e-58 228.4 192 54.7
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 1.7e-57 226.9 218 50.5
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 2.3e-57 226.5 219 50.7
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 3.8e-57 225.7 220 52.3
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 9.5e-56 221.1 192 52.6
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 1.6e-55 220.3 215 51.6
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 3.6e-55 219.2 222 50.5
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 3.0e-54 216.1 227 47.6
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 2.6e-53 213.0 177 59.9
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 4.9e-52 208.8 209 50.2
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 3.3e-48 196.1 213 45.5
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 4.0e-46 189.1 179 53.1
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 8.9e-46 188.0 127 66.1
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 2.0e-45 186.8 194 49.0
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 1.6e-42 177.2 104 76.9
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 6.6e-41 171.8 170 51.2
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 8.6e-41 171.4 128 60.2
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 9.5e-40 167.9 220 41.8
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 1.4e-38 164.1 127 63.0
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 1.8e-38 163.7 213 40.8
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 4.0e-38 162.5 207 43.0
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 4.4e-37 159.1 131 56.5
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.7e-36 157.1 140 56.4
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 5.6e-32 142.1 115 59.1
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 2.1e-31 140.2 148 49.3
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 2.8e-31 139.8 129 50.4
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.2e-29 134.4 110 56.4
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 1.5e-29 134.0 139 51.8
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 1.7e-28 130.6 179 41.3
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 7.1e-27 125.2 95 56.8
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 1.3e-25 120.9 169 38.5
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 4.3e-24 115.9 90 58.9
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 5.6e-24 115.5 138 42.0
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 7.3e-24 115.2 123 47.2
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 3.6e-23 112.8 113 47.8
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 8.1e-23 111.7 213 31.5
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 1.5e-21 107.5 91 54.9
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 6.4e-20 102.1 85 54.1
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 1.1e-19 101.3 104 47.1
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 4.1e-19 99.4 103 48.5
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 7.8e-18 95.1 112 49.1
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 1.1e-16 91.3 91 45.1
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.1e-16 91.3 91 50.5
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 2.5e-16 90.1 88 54.5
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 4.7e-15 85.9 90 46.7
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 4.4e-13 79.3 80 46.2
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 2.2e-12 77.0 61 59.0
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.0e-09 68.2 62 50.0
CDE02G3279 Ceratophyllum demersum HOM05D000901 ORTHO05D128872 9.0e-06 55.1 38 60.5


User provided reference genes

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