Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.6e-244 849.0 417 100.0
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.9e-189 666.0 411 82.7
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 1.8e-171 606.3 417 72.9
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 3.4e-170 602.1 417 72.4
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 2.8e-169 599.0 412 72.8
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 1.6e-164 583.2 418 71.8
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 4.6e-119 432.2 409 54.5
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 3.0e-118 429.5 417 54.2
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.6e-116 423.7 416 52.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 2.1e-116 423.3 314 67.8
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 4.0e-115 419.1 409 53.5
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 2.0e-114 416.8 416 53.1
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 2.6e-114 416.4 417 53.0
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 4.5e-114 415.6 410 52.7
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 2.1e-111 406.8 417 51.6
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 4.6e-111 405.6 415 51.1
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 2.5e-109 399.8 410 52.7
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 5.6e-109 398.7 416 51.9
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 4.8e-108 395.6 409 50.9
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 8.1e-108 394.8 410 52.7
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 9.9e-106 387.9 412 51.0
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 2.2e-105 386.7 407 48.2
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 1.1e-104 384.4 411 50.6
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 1.9e-104 383.6 408 50.2
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 2.4e-104 383.3 419 48.0
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 1.6e-103 380.6 419 47.7
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 2.1e-103 380.2 390 49.7
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 2.1e-103 380.2 410 50.7
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 3.5e-103 379.4 410 47.8
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 4.6e-103 379.0 409 50.4
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 6.0e-103 378.6 409 50.4
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 1.0e-102 377.9 415 48.7
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 3.9e-102 375.9 411 50.6
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 6.7e-102 375.2 410 50.0
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 1.1e-101 374.4 412 49.3
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 1.9e-101 373.6 408 51.2
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 7.4e-101 371.7 411 48.7
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 7.4e-101 371.7 392 51.3
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 9.6e-101 371.3 413 47.7
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 9.6e-101 371.3 410 50.2
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 1.3e-100 370.9 396 49.2
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 2.8e-100 369.8 416 46.2
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 3.7e-100 369.4 411 49.4
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 4.8e-100 369.0 407 50.1
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 8.2e-100 368.2 410 47.6
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 1.1e-99 367.9 410 49.0
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 1.8e-99 367.1 412 49.0
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 2.4e-99 366.7 413 48.2
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 5.3e-99 365.5 407 49.9
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.2e-98 364.4 416 49.3
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 1.2e-98 364.4 417 48.2
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 4.5e-98 362.5 402 49.5
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 2.9e-97 359.8 408 48.5
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 3.8e-97 359.4 413 49.2
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 6.5e-97 358.6 416 47.4
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 6.5e-97 358.6 408 47.8
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 8.4e-97 358.2 464 43.8
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 1.4e-96 357.5 412 48.5
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 1.4e-96 357.5 412 48.5
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 4.2e-96 355.9 412 48.5
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 9.3e-96 354.8 411 48.2
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 2.7e-95 353.2 408 47.3
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 7.9e-95 351.7 417 44.1
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 7.9e-95 351.7 407 46.7
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 3.0e-94 349.7 413 47.0
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 8.7e-94 348.2 406 48.0
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 9.7e-93 344.7 386 49.2
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 1.3e-92 344.4 409 48.4
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 2.1e-92 343.6 418 44.0
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 5.3e-91 339.0 421 43.5
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 1.5e-90 337.4 362 52.5
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 1.0e-89 334.7 432 44.4
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 2.9e-89 333.2 414 45.9
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 3.8e-89 332.8 426 43.0
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 2.7e-87 326.6 412 44.9
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 5.1e-86 322.4 390 46.2
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 6.7e-86 322.0 413 45.5
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 6.7e-86 322.0 304 53.6
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 1.9e-85 320.5 400 45.5
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 2.5e-85 320.1 386 44.0
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 4.1e-83 312.8 380 45.5
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 4.1e-83 312.8 412 43.7
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 1.5e-82 310.8 373 47.7
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 5.5e-80 302.4 381 44.4
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 6.7e-78 295.4 422 42.2
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 2.0e-77 293.9 388 44.6
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 2.6e-77 293.5 281 54.1
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 6.3e-76 288.9 414 39.1
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 4.2e-72 276.2 305 44.9
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 7.2e-72 275.4 411 41.6
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 1.3e-68 264.6 297 50.8
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 3.5e-66 256.5 292 47.6
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 5.0e-65 252.7 408 36.0
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.8e-62 244.2 258 49.6
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 1.3e-60 238.0 286 48.3
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 5.0e-57 226.1 382 36.1
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 6.5e-57 225.7 407 35.1
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 8.5e-57 225.3 294 41.5
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 4.7e-55 219.5 409 34.5
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.0e-54 216.5 188 60.1
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 2.6e-53 213.8 327 38.8
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 9.8e-53 211.8 280 42.1
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 4.8e-52 209.5 310 40.0
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 2.4e-43 180.6 252 43.3
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 7.8e-42 175.6 244 43.0
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 3.8e-41 173.3 169 52.7
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 6.8e-38 162.5 158 51.3
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 2.6e-37 160.6 167 45.5
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 1.4e-35 154.8 148 50.0
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 1.2e-34 151.8 131 61.8
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.6e-34 151.4 164 51.8
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 6.0e-34 149.4 93 73.1
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.6e-31 141.4 140 50.0
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 2.9e-28 130.6 73 79.5
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 2.5e-24 117.5 157 43.3
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 4.7e-23 113.2 200 34.0
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 1.5e-16 91.7 50 80.0
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 1.9e-16 91.3 61 65.6
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 3.6e-15 87.0 57 66.7
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 3.6e-15 87.0 234 30.8
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 4.7e-15 86.7 84 47.6
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 6.2e-15 86.3 57 66.7
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 1.1e-14 85.5 187 32.1
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 6.8e-14 82.8 51 64.7
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 6.8e-14 82.8 51 64.7
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-13 81.6 51 66.7
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 9.9e-13 79.0 49 65.3
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 3.0e-09 67.4 49 55.1
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 3.9e-09 67.0 42 69.0
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 7.3e-08 62.8 184 27.2
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 7.3e-08 62.8 184 27.2
MCO06G046 Micromonas commoda HOM05D005922 ORTHO05D006934 9.0e-06 55.8 68 39.7


User provided reference genes

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