Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.4e-49 198.4 88 100.0
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 5.5e-30 134.0 65 87.7
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.6e-16 88.6 75 50.7
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 8.5e-15 83.6 66 56.1
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 8.5e-15 83.6 75 48.0
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 5.5e-14 80.9 71 53.5
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 1.2e-13 79.7 61 54.1
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 6.1e-13 77.4 61 54.1
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.9e-13 77.0 61 54.1
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.9e-13 77.0 61 54.1
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 7.9e-13 77.0 61 54.1
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 7.9e-13 77.0 54 61.1
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 1.0e-12 76.6 61 52.5
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 1.0e-12 76.6 61 52.5
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 1.4e-12 76.3 104 37.5
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 1.8e-12 75.9 104 37.5
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 1.8e-12 75.9 61 54.1
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 2.3e-12 75.5 104 37.5
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 2.3e-12 75.5 104 37.5
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 2.3e-12 75.5 104 37.5
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 3.0e-12 75.1 104 37.5
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 3.0e-12 75.1 104 37.5
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 3.0e-12 75.1 104 37.5
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 3.0e-12 75.1 61 52.5
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 3.9e-12 74.7 104 37.5
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 3.9e-12 74.7 104 37.5
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 3.9e-12 74.7 104 36.5
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 3.9e-12 74.7 61 50.8
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 3.9e-12 74.7 62 50.0
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 5.1e-12 74.3 61 49.2
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 5.1e-12 74.3 104 37.5
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 5.1e-12 74.3 54 57.4
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 5.1e-12 74.3 61 50.8
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 5.1e-12 74.3 104 36.5
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 6.7e-12 73.9 61 52.5
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 8.8e-12 73.6 61 52.5
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.1e-11 73.2 62 48.4
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 1.1e-11 73.2 61 52.5
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 1.5e-11 72.8 61 47.5
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 1.5e-11 72.8 69 49.3
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.5e-11 72.8 61 47.5
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.0e-11 72.4 68 45.6
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 2.0e-11 72.4 69 49.3
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 2.0e-11 72.4 111 34.2
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 2.0e-11 72.4 69 49.3
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 2.0e-11 72.4 69 49.3
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.5e-11 72.0 68 45.6
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 2.5e-11 72.0 69 49.3
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 2.5e-11 72.0 111 33.3
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 3.3e-11 71.6 110 33.6
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 3.3e-11 71.6 61 49.2
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 3.3e-11 71.6 61 47.5
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 4.3e-11 71.2 60 50.0
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 4.3e-11 71.2 61 49.2
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 4.3e-11 71.2 60 50.0
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 4.3e-11 71.2 68 45.6
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.3e-11 71.2 68 45.6
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 4.3e-11 71.2 61 45.9
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 5.7e-11 70.9 53 56.6
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 5.7e-11 70.9 61 49.2
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 5.7e-11 70.9 61 54.1
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 7.4e-11 70.5 54 53.7
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 7.4e-11 70.5 61 49.2
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 7.4e-11 70.5 62 50.0
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 7.4e-11 70.5 61 49.2
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 7.4e-11 70.5 60 48.3
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 9.7e-11 70.1 61 45.9
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 9.7e-11 70.1 61 49.2
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 9.7e-11 70.1 61 47.5
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 1.3e-10 69.7 61 47.5
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 1.3e-10 69.7 61 49.2
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.3e-10 69.7 64 46.9
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 1.3e-10 69.7 61 49.2
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.3e-10 69.7 61 47.5
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 1.7e-10 69.3 61 45.9
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 1.7e-10 69.3 61 47.5
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 2.2e-10 68.9 54 51.9
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 2.2e-10 68.9 61 49.2
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.2e-10 68.9 61 47.5
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 2.2e-10 68.9 61 45.9
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 2.8e-10 68.6 67 44.8
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 2.8e-10 68.6 61 45.9
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 3.7e-10 68.2 61 47.5
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 3.7e-10 68.2 69 44.9
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 3.7e-10 68.2 61 45.9
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 3.7e-10 68.2 61 45.9
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 4.8e-10 67.8 61 49.2
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 4.8e-10 67.8 61 49.2
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 4.8e-10 67.8 63 47.6
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 6.3e-10 67.4 62 46.8
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 6.3e-10 67.4 62 41.9
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 6.3e-10 67.4 61 47.5
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 8.2e-10 67.0 63 47.6
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 8.2e-10 67.0 61 45.9
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 1.1e-09 66.6 61 44.3
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 1.1e-09 66.6 61 44.3
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 1.1e-09 66.6 62 48.4
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 1.1e-09 66.6 73 42.5
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 1.4e-09 66.2 62 46.8
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 1.4e-09 66.2 63 44.4
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.8e-09 65.9 62 46.8
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 1.8e-09 65.9 61 47.5
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 1.8e-09 65.9 61 47.5
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 2.4e-09 65.5 61 47.5
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 3.1e-09 65.1 67 46.3
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 3.1e-09 65.1 61 42.6
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 3.1e-09 65.1 66 43.9
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 4.1e-09 64.7 54 55.6
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 4.1e-09 64.7 61 42.6
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 4.1e-09 64.7 61 45.9
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 6.9e-09 63.9 53 47.2
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 6.9e-09 63.9 61 42.6
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 9.1e-09 63.5 60 46.7
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 9.1e-09 63.5 60 46.7
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 9.1e-09 63.5 61 44.3
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 9.1e-09 63.5 62 41.9
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 9.1e-09 63.5 61 45.9
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 9.1e-09 63.5 61 45.9
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 1.2e-08 63.2 53 47.2
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 1.5e-08 62.8 53 45.3
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 2.0e-08 62.4 58 48.3
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 3.4e-08 61.6 71 39.4
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 4.5e-08 61.2 61 44.3
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 4.5e-08 61.2 77 40.3
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 1.3e-07 59.7 53 45.3
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 1.3e-07 59.7 77 40.3
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 2.2e-07 58.9 61 41.0
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 3.8e-07 58.2 62 38.7
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 3.8e-07 58.2 61 41.0
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 1.1e-06 56.6 53 43.4
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 7.2e-06 53.9 58 41.4


User provided reference genes

Program Settings