Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 3.3e-84 315.1 167 100.0
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 5.4e-63 244.6 143 90.2
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 5.3e-58 228.0 144 85.4
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 9.9e-57 223.8 143 82.5
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 2.5e-52 209.1 140 83.6
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 9.6e-52 207.2 144 79.9
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 1.4e-50 203.4 144 77.8
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 8.5e-32 141.0 116 69.8
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 3.4e-25 119.0 116 56.0
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 1.0e-24 117.5 140 46.4
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 2.2e-24 116.3 134 50.7
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 8.5e-24 114.4 104 58.7
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 1.9e-23 113.2 110 56.4
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 1.9e-23 113.2 110 56.4
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.5e-23 112.8 132 46.2
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 3.2e-23 112.5 111 53.2
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.2e-22 110.5 126 50.8
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 1.2e-22 110.5 109 56.9
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.2e-22 110.5 137 50.4
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.6e-22 110.2 156 45.5
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 4.7e-22 108.6 101 56.4
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 8.0e-22 107.8 143 45.5
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 8.0e-22 107.8 111 53.2
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 1.0e-21 107.5 121 51.2
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.0e-21 107.5 124 46.8
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 1.4e-21 107.1 101 55.4
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 1.4e-21 107.1 119 50.4
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.8e-21 106.7 119 47.9
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.8e-21 106.7 119 54.6
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.8e-21 106.7 149 45.6
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 1.8e-21 106.7 121 47.1
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 2.3e-21 106.3 121 47.1
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 2.3e-21 106.3 135 48.1
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 3.0e-21 105.9 114 51.8
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 3.9e-21 105.5 140 47.9
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.9e-21 105.5 140 47.9
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.9e-21 105.5 140 47.9
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 3.9e-21 105.5 141 44.7
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 5.2e-21 105.1 111 51.4
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 6.7e-21 104.8 114 50.0
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 8.8e-21 104.4 136 49.3
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 8.8e-21 104.4 103 56.3
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 8.8e-21 104.4 110 51.8
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 1.1e-20 104.0 117 48.7
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 1.5e-20 103.6 120 48.3
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 2.0e-20 103.2 98 57.1
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 2.0e-20 103.2 124 46.8
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.6e-20 102.8 114 49.1
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.6e-20 102.8 120 51.7
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 2.6e-20 102.8 140 46.4
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 3.3e-20 102.4 141 44.7
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 3.3e-20 102.4 101 55.4
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 4.4e-20 102.1 124 49.2
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 4.4e-20 102.1 114 49.1
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 7.4e-20 101.3 104 49.0
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 7.4e-20 101.3 112 50.0
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 7.4e-20 101.3 96 55.2
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.3e-19 100.5 141 46.8
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 1.3e-19 100.5 115 47.0
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.7e-19 100.1 104 51.9
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.7e-19 100.1 148 38.5
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 2.2e-19 99.8 141 43.3
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.2e-19 99.8 115 44.3
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 2.8e-19 99.4 137 47.4
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 2.8e-19 99.4 143 49.0
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 8.2e-19 97.8 107 47.7
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 1.1e-18 97.4 147 38.1
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 2.4e-18 96.3 104 51.9
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.4e-18 96.3 164 39.0
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.4e-18 96.3 164 39.0
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 4.1e-18 95.5 136 39.0
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 9.1e-18 94.4 107 43.0
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.2e-17 94.0 92 50.0
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 1.2e-17 94.0 147 36.1
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 1.6e-17 93.6 140 37.1
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.0e-17 93.2 116 43.1
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 3.5e-17 92.4 140 40.0
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 5.9e-17 91.7 147 34.7
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.0e-16 90.9 118 44.1
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 2.9e-16 89.4 116 38.8
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 3.8e-16 89.0 142 38.7
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 3.8e-16 89.0 95 46.3
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 5.0e-16 88.6 109 41.3
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 6.5e-16 88.2 109 40.4
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 8.5e-16 87.8 130 38.5
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 8.5e-16 87.8 130 38.5
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.1e-15 87.4 130 38.5
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 2.5e-15 86.3 134 37.3
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 4.2e-15 85.5 127 40.2
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 5.5e-15 85.1 116 41.4
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 9.4e-15 84.3 127 39.4
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 9.4e-15 84.3 129 38.0
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 9.4e-15 84.3 83 51.8
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 2.1e-14 83.2 116 40.5
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.1e-14 83.2 103 43.7
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.7e-14 82.8 74 58.1
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.0e-13 79.3 111 42.3
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.2e-12 77.4 111 41.4
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 4.4e-12 75.5 87 44.8
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 9.7e-12 74.3 88 47.7
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 4.1e-10 68.9 90 44.4
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 2.0e-09 66.6 85 47.1
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 4.5e-09 65.5 81 46.9
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 3.8e-08 62.4 102 40.2
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 1.6e-06 57.0 89 39.3


User provided reference genes

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