Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001925g0210 Nicotiana tabacum HOM05D012804 ORTHO05D003486 4.6e-284 980.7 550 100.0
Nitab4.5_0011766g0010 Nicotiana tabacum HOM05D012804 ORTHO05D003486 1.7e-254 882.5 550 86.5
PGSC0003DMG400004651 Solanum tuberosum HOM05D012804 ORTHO05D003486 1.1e-163 580.9 576 61.1
Sopen12g034540 Solanum pennellii HOM05D012804 ORTHO05D003486 3.2e-160 569.3 576 60.6
Solyc12g099920.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 4.1e-160 568.9 576 59.5
CAN.G484.6 Capsicum annuum HOM05D012804 ORTHO05D003486 3.9e-150 535.8 572 54.9
Peaxi162Scf00062g00089 Petunia axillaris HOM05D012804 ORTHO05D003486 1.1e-125 454.5 552 50.5
Nitab4.5_0000205g0060 Nicotiana tabacum HOM05D012804 ORTHO05D003486 4.9e-76 289.7 553 37.6
CAN.G1187.8 Capsicum annuum HOM05D012804 ORTHO05D003486 8.9e-70 268.9 560 35.0
Peaxi162Scf00234g00718 Petunia axillaris HOM05D012804 ORTHO05D003486 9.2e-67 258.8 607 35.4
Solyc11g072250.2 Solanum lycopersicum HOM05D012804 ORTHO05D003486 2.3e-62 244.2 559 34.2
Sopen11g029920 Solanum pennellii HOM05D012804 ORTHO05D003486 1.5e-61 241.5 559 34.0
Nitab4.5_0003471g0060 Nicotiana tabacum HOM05D012804 ORTHO05D003486 7.5e-61 239.2 569 33.9
Thecc.08G133800 Theobroma cacao HOM05D006236 ORTHO05D003486 5.8e-21 106.7 171 40.9
Oeu047174.1 Olea europaea HOM05D006236 ORTHO05D003486 3.8e-20 104.0 122 44.3
GSVIVG01008800001 Vitis vinifera HOM05D006236 ORTHO05D003486 4.2e-19 100.5 159 37.1
Gohir.D02G077800 Gossypium hirsutum HOM05D006236 ORTHO05D003486 5.5e-19 100.1 97 49.5
BolC1t05537H Brassica oleracea HOM05D009282 ORTHO05D003486 1.6e-18 98.6 158 34.8
CiPaw.03G184300 Carya illinoinensis HOM05D006236 ORTHO05D003486 1.8e-17 95.1 108 41.7
MSTRG.24177 Avicennia marina HOM05D006236 ORTHO05D003486 2.3e-17 94.7 456 25.9
ATR0824G107 Amborella trichopoda HOM05D049392 ORTHO05D003486 3.0e-17 94.4 100 45.0
BraA01t04367Z Brassica rapa HOM05D009282 ORTHO05D003486 5.1e-17 93.6 158 32.9
QL12p002389 Quercus lobata HOM05D006236 ORTHO05D003486 8.7e-17 92.8 113 41.6
HPP92_008975 Vanilla planifolia HOM05D006236 ORTHO05D003486 1.1e-16 92.4 96 46.9
SpUn0522_0010 Schrenkiella parvula HOM05D009282 ORTHO05D003486 1.5e-16 92.0 160 37.5
SGA_v2.0_scaffold28G11968 Striga asiatica HOM05D006236 ORTHO05D003486 1.5e-16 92.0 114 41.2
Sp3g06660 Schrenkiella parvula HOM05D009282 ORTHO05D003486 1.9e-16 91.7 159 37.1
THA.LOC104812078 Tarenaya hassleriana HOM05D006236 ORTHO05D003486 5.7e-16 90.1 136 34.6
BcaB04g21273 Brassica carinata HOM05D009282 ORTHO05D003486 9.6e-16 89.4 139 36.0
Dinv14700 Davidia involucrata HOM05D006236 ORTHO05D003486 1.3e-15 89.0 483 25.7
Manes.18G083050 Manihot esculenta HOM05D006236 ORTHO05D003486 1.3e-15 89.0 107 40.2
Nn5g28446 Nelumbo nucifera HOM05D006236 ORTHO05D003486 1.3e-15 89.0 167 32.3
Thhalv10020550m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 1.6e-15 88.6 159 35.2
Glyma.13G034700 Glycine max HOM05D006236 ORTHO05D003486 1.6e-15 88.6 112 42.0
Os05g0423200 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 1.6e-15 88.6 176 31.8
Pp3c8_15980 Physcomitrium patens HOM05D006236 ORTHO05D003486 2.1e-15 88.2 107 42.1
CiPaw.11G076600 Carya illinoinensis HOM05D006236 ORTHO05D003486 2.8e-15 87.8 147 37.4
Manes.02G169100 Manihot esculenta HOM05D006236 ORTHO05D003486 2.8e-15 87.8 120 36.7
Sed0000792 Sechium edule HOM05D006236 ORTHO05D003486 3.7e-15 87.4 112 40.2
Phvul.001G067500 Phaseolus vulgaris HOM05D006236 ORTHO05D003486 6.2e-15 86.7 112 42.0
DCAR_028204 Daucus carota HOM05D006236 ORTHO05D003486 1.4e-14 85.5 135 34.8
VMungo1309G0219 Vigna mungo HOM05D006236 ORTHO05D003486 2.4e-14 84.7 105 38.1
arahy.Tifrunner.gnm1.ann1.0TWQ75 Arachis hypogaea HOM05D024686 ORTHO05D003486 3.1e-14 84.3 128 33.6
arahy.Tifrunner.gnm1.ann1.E8STVK Arachis hypogaea HOM05D024686 ORTHO05D003486 3.1e-14 84.3 128 33.6
Sed0021928 Sechium edule HOM05D006236 ORTHO05D003486 4.0e-14 84.0 173 31.2
ClCG09G021830 Citrullus lanatus HOM05D006236 ORTHO05D003486 5.3e-14 83.6 167 32.9
Ciclev10000428m.g Citrus clementina HOM05D006236 ORTHO05D003486 5.3e-14 83.6 97 41.2
Duzib093G1452 Durio zibethinus HOM05D006236 ORTHO05D003486 6.9e-14 83.2 153 37.9
Nitab4.5_0000317g0090 Nicotiana tabacum HOM05D020480 ORTHO05D003486 6.9e-14 83.2 502 24.3
arahy.Tifrunner.gnm1.ann1.Y133Z2 Arachis hypogaea HOM05D024686 ORTHO05D003486 9.0e-14 82.8 99 39.4
Migut.N03258 Erythranthe guttata HOM05D006236 ORTHO05D003486 1.2e-13 82.4 108 40.7
Eucgr.E01002 Eucalyptus grandis HOM05D006236 ORTHO05D003486 1.2e-13 82.4 104 41.3
CsaV3_7G022170 Cucumis sativus L. HOM05D006236 ORTHO05D003486 1.5e-13 82.0 112 35.7
Aa31LG7G5540 Aethionema arabicum HOM05D012602 ORTHO05D003486 2.0e-13 81.6 109 33.9
COL.COLO4_33391 Corchorus olitorius HOM05D006236 ORTHO05D003486 2.0e-13 81.6 156 37.2
Glyma.06G159000 Glycine max HOM05D006236 ORTHO05D003486 3.4e-13 80.9 127 33.9
Os04g0539100 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 3.4e-13 80.9 101 40.6
SMO147G0016 Selaginella moellendorffii HOM05D006236 ORTHO05D003486 3.4e-13 80.9 111 38.7
Cc00_g10350 Coffea canephora HOM05D006236 ORTHO05D003486 4.5e-13 80.5 149 36.9
Glyma.14G156000 Glycine max HOM05D006236 ORTHO05D003486 5.8e-13 80.1 110 40.0
Lj1g0007441 Lotus japonicus HOM05D006236 ORTHO05D003486 5.8e-13 80.1 128 35.2
arahy.Tifrunner.gnm1.ann1.JAMD1N Arachis hypogaea HOM05D024686 ORTHO05D003486 7.6e-13 79.7 168 30.4
Haze_03510 Corylus avellana HOM05D006236 ORTHO05D003486 1.0e-12 79.3 146 32.2
Dinv27264 Davidia involucrata HOM05D006236 ORTHO05D003486 1.0e-12 79.3 95 41.1
PSO170G0742 Papaver somniferum HOM05D020877 ORTHO05D003486 1.0e-12 79.3 179 30.2
SMO196G0029 Selaginella moellendorffii HOM05D002377 ORTHO05D003486 1.0e-12 79.3 89 39.3
TPR.G32494 Trifolium pratense HOM05D006236 ORTHO05D003486 1.0e-12 79.3 111 33.3
Zm00001eb075330 Zea mays HOM05D006236 ORTHO05D003486 1.0e-12 79.3 162 32.1
Actinidia15208 Actinidia chinensis HOM05D006236 ORTHO05D003486 1.3e-12 79.0 120 35.8
BcaC05g29566 Brassica carinata HOM05D009282 ORTHO05D003486 1.3e-12 79.0 161 34.2
Lalb_Chr08g0237871 Lupinus albus HOM05D006236 ORTHO05D003486 1.3e-12 79.0 98 38.8
Carub.0002s2415 Capsella rubella HOM05D009282 ORTHO05D003486 1.7e-12 78.6 138 32.6
Ca_17011_v3 Cicer arietinum L. HOM05D006236 ORTHO05D003486 1.7e-12 78.6 110 38.2
Psat0s1315g0200 Pisum sativum HOM05D006236 ORTHO05D003486 2.9e-12 77.8 162 31.5
SEGI_21165 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 2.9e-12 77.8 115 38.3
Gorai.005G087400 Gossypium raimondii HOM05D006236 ORTHO05D003486 3.8e-12 77.4 89 46.1
Oeu016130.1 Olea europaea HOM05D006236 ORTHO05D003486 3.8e-12 77.4 168 31.5
Migut.C01072 Erythranthe guttata HOM05D006236 ORTHO05D003486 5.0e-12 77.0 154 33.8
Medtr2g010820 Medicago truncatula HOM05D006236 ORTHO05D003486 5.0e-12 77.0 112 35.7
Pp3c14_13780 Physcomitrium patens HOM05D002377 ORTHO05D003486 5.0e-12 77.0 106 37.7
Aa31LG4G7280 Aethionema arabicum HOM05D009282 ORTHO05D003486 8.4e-12 76.3 115 33.9
CARHR082440 Cardamine hirsuta HOM05D009282 ORTHO05D003486 8.4e-12 76.3 168 31.5
arahy.Tifrunner.gnm1.ann1.3CVD71 Arachis hypogaea HOM05D024686 ORTHO05D003486 1.1e-11 75.9 99 37.4
Cfa012635 Carpinus fangiana HOM05D006236 ORTHO05D003486 1.1e-11 75.9 112 33.0
Gohir.A02G070600 Gossypium hirsutum HOM05D006236 ORTHO05D003486 1.1e-11 75.9 177 31.6
PSO528G0080 Papaver somniferum HOM05D020877 ORTHO05D003486 1.1e-11 75.9 116 31.9
TWI60G0548 Tripterygium wilfordii HOM05D006236 ORTHO05D003486 1.1e-11 75.9 111 35.1
AL2G37450 Arabidopsis lyrata HOM05D009282 ORTHO05D003486 1.9e-11 75.1 160 30.6
Glyma.04G206551 Glycine max HOM05D006236 ORTHO05D003486 1.9e-11 75.1 147 29.9
Medtr1g026790 Medicago truncatula HOM05D006236 ORTHO05D003486 1.9e-11 75.1 111 34.2
Oeu042695.1 Olea europaea HOM05D006236 ORTHO05D003486 1.9e-11 75.1 119 41.2
TPR.G28699 Trifolium pratense HOM05D006236 ORTHO05D003486 2.5e-11 74.7 102 39.2
A05p40490 Brassica napus HOM05D009282 ORTHO05D003486 3.2e-11 74.3 91 41.8
BolC5t34614H Brassica oleracea HOM05D009282 ORTHO05D003486 3.2e-11 74.3 91 42.9
BraA05t22782Z Brassica rapa HOM05D009282 ORTHO05D003486 3.2e-11 74.3 91 41.8
CARHR021930 Cardamine hirsuta HOM05D012602 ORTHO05D003486 3.2e-11 74.3 171 28.7
PSO170G3037 Papaver somniferum HOM05D020877 ORTHO05D003486 3.2e-11 74.3 120 30.0
Solyc04g057970.3 Solanum lycopersicum HOM05D020480 ORTHO05D003486 3.2e-11 74.3 157 31.2
Phvul.009G156700 Phaseolus vulgaris HOM05D006236 ORTHO05D003486 4.2e-11 73.9 160 30.6
CANSAT78G0622 Cannabis sativa HOM05D006236 ORTHO05D003486 5.5e-11 73.6 112 34.8
SEGI_20168 Sequoiadendron giganteum HOM05D029892 ORTHO05D003486 5.5e-11 73.6 101 34.7
Sopen04g025830 Solanum pennellii HOM05D020480 ORTHO05D003486 5.5e-11 73.6 157 31.2
FAN15G0899 Fragaria x ananassa HOM05D006236 ORTHO05D003486 7.1e-11 73.2 101 36.6
C05p59590 Brassica napus HOM05D009282 ORTHO05D003486 9.3e-11 72.8 162 32.7
FAN24G2475 Fragaria x ananassa HOM05D006236 ORTHO05D003486 9.3e-11 72.8 90 38.9
Lj7E351T3 Lonicera japonica HOM05D006236 ORTHO05D003486 9.3e-11 72.8 75 48.0
Mapoly0015s0190 Marchantia polymorpha HOM05D006236 ORTHO05D003486 9.3e-11 72.8 115 33.9
Nitab4.5_0003485g0040 Nicotiana tabacum HOM05D020480 ORTHO05D003486 9.3e-11 72.8 306 27.1
PSO528G0175 Papaver somniferum HOM05D020877 ORTHO05D003486 9.3e-11 72.8 102 33.3
Zm00001eb385310 Zea mays HOM05D006236 ORTHO05D003486 9.3e-11 72.8 88 43.2
Carub.0003s0731 Capsella rubella HOM05D009282 ORTHO05D003486 1.6e-10 72.0 158 31.6
BcaB05g25029 Brassica carinata HOM05D009282 ORTHO05D003486 2.1e-10 71.6 132 35.6
PGR044G2319 Punica granatum HOM05D006236 ORTHO05D003486 2.1e-10 71.6 165 32.7
Cfa010576 Carpinus fangiana HOM05D006236 ORTHO05D003486 2.7e-10 71.2 116 35.3
Gorai.005G087300 Gossypium raimondii HOM05D006236 ORTHO05D003486 2.7e-10 71.2 150 35.3
CARHR070750 Cardamine hirsuta HOM05D009282 ORTHO05D003486 3.5e-10 70.9 143 31.5
Psat5g058120 Pisum sativum HOM05D006236 ORTHO05D003486 3.5e-10 70.9 93 43.0
SEGI_27702 Sequoiadendron giganteum HOM05D002377 ORTHO05D003486 3.5e-10 70.9 104 40.4
Sp5g32440 Schrenkiella parvula HOM05D009282 ORTHO05D003486 4.6e-10 70.5 132 34.8
PSO528G0025 Papaver somniferum HOM05D020877 ORTHO05D003486 6.1e-10 70.1 183 27.3
RcHm_v2.0_Chr6g0296811 Rosa chinensis HOM05D006236 ORTHO05D003486 6.1e-10 70.1 446 25.3
A02p21190 Brassica napus HOM05D009282 ORTHO05D003486 7.9e-10 69.7 133 36.1
AL1G34710 Arabidopsis lyrata HOM05D012602 ORTHO05D003486 1.0e-09 69.3 171 29.2
BraA02t07136Z Brassica rapa HOM05D009282 ORTHO05D003486 1.0e-09 69.3 133 35.3
CANSAT78G1984 Cannabis sativa HOM05D006236 ORTHO05D003486 1.0e-09 69.3 100 36.0
Atru.chr13.1589 Acer truncatum HOM05D006236 ORTHO05D003486 1.3e-09 68.9 88 42.0
BcaC03g15725 Brassica carinata HOM05D009282 ORTHO05D003486 1.3e-09 68.9 132 34.1
BolC2t09471H Brassica oleracea HOM05D009282 ORTHO05D003486 1.3e-09 68.9 132 34.1
MD15G1133200 Malus domestica HOM05D006236 ORTHO05D003486 1.3e-09 68.9 113 31.9
SalBow2G2217 Salvia bowleyana HOM05D006236 ORTHO05D003486 1.3e-09 68.9 437 24.7
TAR625G0695 Trochodendron aralioides HOM05D006236 ORTHO05D003486 1.3e-09 68.9 426 24.2
C02p34410 Brassica napus HOM05D009282 ORTHO05D003486 1.8e-09 68.6 132 34.1
FvH4_2g27980 Fragaria vesca HOM05D006236 ORTHO05D003486 1.8e-09 68.6 103 38.8
FAN20G3074 Fragaria x ananassa HOM05D006236 ORTHO05D003486 1.8e-09 68.6 107 37.4
Carub.0001s2100 Capsella rubella HOM05D012602 ORTHO05D003486 2.3e-09 68.2 170 27.6
Medtr1g026810 Medicago truncatula HOM05D006236 ORTHO05D003486 2.3e-09 68.2 111 33.3
RcHm_v2.0_Chr6g0296801 Rosa chinensis HOM05D006236 ORTHO05D003486 2.3e-09 68.2 114 36.8
Sabra02G0060900 Salix brachista HOM05D006236 ORTHO05D003486 2.3e-09 68.2 519 22.9
AT1G21560 Arabidopsis thaliana HOM05D012602 ORTHO05D003486 3.0e-09 67.8 169 28.4
AT3G07730 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 3.0e-09 67.8 111 36.0
Gohir.D02G077700 Gossypium hirsutum HOM05D006236 ORTHO05D003486 3.0e-09 67.8 86 43.0
AT4G01170 Arabidopsis thaliana HOM05D009282 ORTHO05D003486 3.9e-09 67.4 112 34.8
Medtr1g026800 Medicago truncatula HOM05D006236 ORTHO05D003486 3.9e-09 67.4 111 33.3
RcHm_v2.0_Chr6g0296791 Rosa chinensis HOM05D006236 ORTHO05D003486 3.9e-09 67.4 101 37.6
CDE02G3425 Ceratophyllum demersum HOM05D006236 ORTHO05D003486 5.1e-09 67.0 168 28.6
Lsat_1_v5_gn_6_110341 Lactuca sativa HOM05D006236 ORTHO05D003486 8.7e-09 66.2 106 32.1
Hund17351 Selenicereus undatus HOM05D031599 ORTHO05D003486 8.7e-09 66.2 125 34.4
AagrBONN_evm.TU.Sc2ySwM_228.1542 Anthoceros agrestis HOM05D002377 ORTHO05D003486 1.1e-08 65.9 166 30.1
SGA_v2.0_scaffold52G18912 Striga asiatica HOM05D006236 ORTHO05D003486 1.1e-08 65.9 170 31.8
CANSAT78G2054 Cannabis sativa HOM05D006236 ORTHO05D003486 1.5e-08 65.5 108 34.3
Potri.002G077500 Populus trichocarpa HOM05D006236 ORTHO05D003486 1.5e-08 65.5 523 21.2
Thhalv10007934m.g Eutrema salsugineum HOM05D012602 ORTHO05D003486 2.5e-08 64.7 167 28.1
TPR.G28151 Trifolium pratense HOM05D006236 ORTHO05D003486 2.5e-08 64.7 111 30.6
TPR.G24541 Trifolium pratense HOM05D006236 ORTHO05D003486 3.3e-08 64.3 110 31.8
FAN27G1104 Fragaria x ananassa HOM05D006236 ORTHO05D003486 5.7e-08 63.5 117 31.6
AL3G19090 Arabidopsis lyrata HOM05D009282 ORTHO05D003486 7.4e-08 63.2 120 35.0
FAN02G2378 Fragaria x ananassa HOM05D006236 ORTHO05D003486 7.4e-08 63.2 103 37.9
Os04g0221000 Oryza sativa ssp. japonica HOM05D006236 ORTHO05D003486 7.4e-08 63.2 100 37.0
THA.LOC104813683 Tarenaya hassleriana HOM05D009282 ORTHO05D003486 2.8e-07 61.2 114 33.3
arahy.Tifrunner.gnm1.ann1.710PNE Arachis hypogaea HOM05D006236 ORTHO05D003486 4.8e-07 60.5 101 35.6
Aqoxy3G01606 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 6.3e-07 60.1 123 31.7
Prupe.1G488800 Prunus persica HOM05D006236 ORTHO05D003486 6.3e-07 60.1 440 23.6
unitig_899.g14422 Utricularia gibba HOM05D006236 ORTHO05D003486 6.3e-07 60.1 143 28.0
CANSAT25G1833 Cannabis sativa HOM05D006236 ORTHO05D003486 8.2e-07 59.7 104 32.7
Lalb_Chr04g0253561 Lupinus albus HOM05D006236 ORTHO05D003486 8.2e-07 59.7 467 23.3
Peaxi162Scf00066g00424 Petunia axillaris HOM05D020480 ORTHO05D003486 8.2e-07 59.7 70 38.6
Thhalv10018476m.g Eutrema salsugineum HOM05D009282 ORTHO05D003486 1.1e-06 59.3 340 24.4
QL09p032233 Quercus lobata HOM05D006236 ORTHO05D003486 1.1e-06 59.3 442 24.0
Cc10_g13660 Coffea canephora HOM05D006236 ORTHO05D003486 1.4e-06 58.9 80 42.5
Medtr3g097180 Medicago truncatula HOM05D006236 ORTHO05D003486 2.4e-06 58.2 88 35.2
Aqoxy1G03360 Aquilegia oxysepala HOM05D020429 ORTHO05D023582 3.1e-06 57.8 169 29.0
SalBow7G0481 Salvia bowleyana HOM05D006236 ORTHO05D003486 3.1e-06 57.8 58 44.8
SalBow7G2443 Salvia bowleyana HOM05D006236 ORTHO05D003486 3.1e-06 57.8 58 44.8
arahy.Tifrunner.gnm1.ann1.BNP26P Arachis hypogaea HOM05D006236 ORTHO05D003486 4.1e-06 57.4 90 38.9
FvH4_2g27990 Fragaria vesca HOM05D006236 ORTHO05D003486 4.1e-06 57.4 441 25.4


User provided reference genes

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