Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 2.9e-105 385.2 187 100.0
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.9e-104 382.5 187 98.9
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 4.5e-98 361.3 187 95.2
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 5.8e-98 360.9 187 95.2
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.7e-97 359.4 187 94.7
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 1.1e-96 356.7 187 93.0
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 9.3e-96 353.6 186 91.4
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.5e-95 351.7 181 91.7
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.0e-94 348.6 181 91.7
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 5.1e-94 347.8 187 89.3
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 1.5e-93 346.3 188 87.2
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 1.9e-93 345.9 188 86.7
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 2.5e-93 345.5 185 89.7
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 3.3e-93 345.1 185 88.1
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 3.3e-93 345.1 188 87.2
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 4.3e-93 344.7 187 87.2
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.3e-92 343.2 185 89.2
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 1.3e-92 343.2 185 89.2
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 1.3e-92 343.2 187 88.2
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 1.6e-92 342.8 184 88.6
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 1.6e-92 342.8 184 87.5
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 4.8e-92 341.3 187 87.2
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 6.2e-92 340.9 181 88.4
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 6.2e-92 340.9 188 85.1
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 6.2e-92 340.9 181 87.3
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 8.2e-92 340.5 184 87.0
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 1.4e-91 339.7 187 88.2
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 3.1e-91 338.6 180 89.4
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 5.3e-91 337.8 185 85.9
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 6.9e-91 337.4 187 86.1
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 1.2e-90 336.7 181 86.7
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 1.5e-90 336.3 181 86.7
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 2.0e-90 335.9 187 85.6
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.6e-90 335.5 185 83.8
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.6e-90 335.5 185 83.8
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.6e-90 335.5 181 85.6
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 3.4e-90 335.1 181 84.0
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 3.4e-90 335.1 180 86.1
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 3.4e-90 335.1 181 85.1
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 3.4e-90 335.1 187 85.0
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 5.8e-90 334.3 181 84.0
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 5.8e-90 334.3 181 84.0
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 5.8e-90 334.3 184 84.8
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 7.6e-90 334.0 181 86.2
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 7.6e-90 334.0 185 85.4
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 7.6e-90 334.0 181 85.1
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 2.2e-89 332.4 185 83.8
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 2.2e-89 332.4 181 83.4
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 2.9e-89 332.0 185 83.8
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 3.8e-89 331.6 181 84.0
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 3.8e-89 331.6 180 85.6
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 3.8e-89 331.6 181 84.5
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 3.8e-89 331.6 187 82.9
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 3.8e-89 331.6 187 82.9
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 3.8e-89 331.6 187 82.9
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 5.0e-89 331.3 180 83.9
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 6.5e-89 330.9 181 84.5
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 8.4e-89 330.5 181 84.5
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 2.5e-88 328.9 180 83.9
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 3.2e-88 328.6 181 84.5
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 3.2e-88 328.6 185 82.7
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 4.2e-88 328.2 181 84.5
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 4.2e-88 328.2 184 83.7
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 5.5e-88 327.8 185 82.2
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 7.1e-88 327.4 178 85.4
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 9.3e-88 327.0 187 81.3
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 9.3e-88 327.0 181 83.4
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.1e-87 325.9 187 82.4
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 2.1e-87 325.9 184 83.7
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 2.1e-87 325.9 181 83.4
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 2.7e-87 325.5 180 86.1
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 2.7e-87 325.5 181 82.9
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 3.5e-87 325.1 180 83.3
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 6.1e-87 324.3 185 83.8
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 7.9e-87 323.9 181 82.9
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 1.0e-86 323.6 180 81.7
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 1.3e-86 323.2 181 81.2
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 1.8e-86 322.8 174 86.2
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 2.3e-86 322.4 181 81.2
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 3.0e-86 322.0 181 81.2
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 3.9e-86 321.6 182 81.3
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 2.5e-85 318.9 182 80.2
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 3.3e-85 318.5 182 80.2
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 3.3e-85 318.5 181 81.8
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 5.7e-85 317.8 180 80.6
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 7.4e-85 317.4 180 79.4
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 9.7e-85 317.0 182 79.7
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 9.7e-85 317.0 180 81.1
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 9.7e-85 317.0 180 80.0
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 2.2e-84 315.8 180 79.4
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 2.2e-84 315.8 182 79.1
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 3.7e-84 315.1 180 79.4
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 3.7e-84 315.1 180 79.4
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 3.7e-84 315.1 180 79.4
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 4.8e-84 314.7 182 78.6
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 4.8e-84 314.7 182 78.6
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 8.2e-84 313.9 180 78.9
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 1.1e-83 313.5 180 78.9
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.8e-83 312.8 172 82.6
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 2.4e-83 312.4 180 78.9
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 3.1e-83 312.0 193 77.2
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 1.3e-81 306.6 185 76.2
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 3.8e-81 305.1 185 76.2
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.9e-80 302.8 181 79.0
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 2.5e-80 302.4 181 77.9
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 1.2e-79 300.1 181 76.8
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 2.7e-79 298.9 181 76.2
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 2.0e-77 292.7 180 74.4
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 2.0e-77 292.7 181 77.3
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 2.0e-77 292.7 181 76.8
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 9.7e-77 290.4 181 75.7
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 1.3e-76 290.0 181 76.8
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 1.4e-75 286.6 181 75.1
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 5.3e-75 284.6 181 74.6
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 9.1e-75 283.9 181 73.5
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 9.1e-75 283.9 181 74.0
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 2.6e-74 282.3 180 70.6
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 7.7e-74 280.8 184 70.1
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 1.0e-73 280.4 173 72.3
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 1.0e-65 253.8 181 63.5
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 6.7e-62 241.1 180 56.1
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 7.7e-58 227.6 183 54.6
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 4.7e-55 218.4 181 53.0
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 8.0e-55 217.6 186 52.2
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 9.8e-53 210.7 172 59.3
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 4.8e-52 208.4 185 50.3
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 1.3e-49 200.3 185 49.2
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 3.4e-45 185.7 168 51.8
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.6e-39 166.8 180 45.6
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 7.5e-37 157.9 87 85.1
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 2.3e-30 136.3 172 41.9
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 2.3e-22 109.8 86 58.1
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 1.2e-21 107.5 154 35.1
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 4.4e-21 105.5 54 88.9
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 6.6e-09 65.1 88 36.4


User provided reference genes

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