Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 4.4e-147 524.6 270 100.0
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 6.3e-61 238.4 153 85.0
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 4.7e-56 222.2 156 79.5
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.7e-51 206.5 127 82.7
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 4.5e-51 205.7 156 76.3
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 5.0e-50 202.2 155 74.8
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 3.1e-44 183.0 155 65.8
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 4.1e-44 182.6 155 68.4
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 7.0e-44 181.8 144 67.4
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 1.2e-38 164.5 152 63.2
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 9.8e-38 161.4 150 62.7
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 3.7e-37 159.5 143 64.3
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 1.1e-36 157.9 146 58.2
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 6.6e-34 148.7 120 66.7
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 9.5e-33 144.8 148 54.1
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 2.1e-32 143.7 153 55.6
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 2.1e-32 143.7 120 60.8
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 4.7e-32 142.5 155 53.5
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 8.0e-32 141.7 121 62.0
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 1.0e-31 141.4 146 56.2
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 2.3e-31 140.2 148 56.8
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 2.3e-31 140.2 155 53.5
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 2.3e-31 140.2 154 53.9
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 2.3e-31 140.2 151 58.3
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 3.1e-31 139.8 109 65.1
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 8.9e-31 138.3 150 53.3
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 1.5e-30 137.5 154 55.8
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 2.0e-30 137.1 154 53.9
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 5.8e-30 135.6 148 54.7
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 7.5e-30 135.2 115 60.9
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 9.8e-30 134.8 152 53.3
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 2.2e-29 133.7 122 58.2
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 2.9e-29 133.3 123 60.2
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 6.4e-29 132.1 155 54.8
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 1.1e-28 131.3 124 53.2
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 1.4e-28 131.0 155 52.9
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.4e-28 131.0 120 58.3
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.9e-28 130.6 144 52.8
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.9e-28 130.6 118 59.3
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 1.9e-28 130.6 136 55.1
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 2.4e-28 130.2 118 55.1
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 2.4e-28 130.2 155 54.8
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 4.1e-28 129.4 155 52.9
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 7.0e-28 128.6 156 52.6
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 9.2e-28 128.3 122 53.3
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.2e-27 127.9 144 52.1
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.2e-27 127.9 144 52.1
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 2.7e-27 126.7 117 57.3
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 2.7e-27 126.7 155 52.3
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 3.5e-27 126.3 120 52.5
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 4.6e-27 125.9 120 59.2
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 7.8e-27 125.2 155 54.2
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.0e-26 124.8 123 56.9
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.0e-26 124.8 123 56.9
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.7e-26 124.0 120 57.5
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 3.9e-26 122.9 123 56.1
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 6.6e-26 122.1 161 47.8
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 6.6e-26 122.1 124 57.3
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 8.6e-26 121.7 150 51.3
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.5e-25 120.9 123 55.3
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 3.3e-25 119.8 110 58.2
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 4.3e-25 119.4 118 59.3
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 5.6e-25 119.0 143 51.0
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 9.5e-25 118.2 153 53.6
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 1.6e-24 117.5 131 51.9
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 3.6e-24 116.3 118 52.5
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 3.6e-24 116.3 119 53.8
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 4.7e-24 115.9 109 59.6
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 6.2e-24 115.5 107 56.1
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 6.2e-24 115.5 117 54.7
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 8.1e-24 115.2 107 56.1
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 8.1e-24 115.2 107 56.1
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 8.1e-24 115.2 149 49.0
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 1.8e-23 114.0 112 56.2
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 1.8e-23 114.0 117 54.7
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 3.1e-23 113.2 120 49.2
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 4.0e-23 112.8 106 55.7
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 6.8e-23 112.1 111 53.2
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 6.8e-23 112.1 113 54.9
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 1.5e-22 110.9 107 56.1
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 2.0e-22 110.5 107 56.1
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 2.6e-22 110.2 119 57.1
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 7.5e-22 108.6 107 55.1
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 1.7e-21 107.5 107 55.1
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.7e-21 107.5 89 60.7
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 2.2e-21 107.1 108 53.7
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 2.9e-21 106.7 115 48.7
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 3.7e-21 106.3 100 58.0
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 3.7e-21 106.3 116 50.9
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 4.1e-20 102.8 105 49.5
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 1.6e-19 100.9 114 50.9
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 3.5e-19 99.8 115 50.4
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 4.6e-19 99.4 123 48.8
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 4.6e-19 99.4 106 50.9
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 4.6e-19 99.4 92 55.4
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.6e-19 99.4 106 51.9
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.6e-19 99.4 106 51.9
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 6.0e-19 99.0 159 42.8
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 7.8e-19 98.6 107 48.6
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 1.3e-18 97.8 116 50.0
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 1.7e-18 97.4 116 50.0
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 2.3e-18 97.1 116 50.0
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 3.9e-18 96.3 107 50.5
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 5.1e-18 95.9 116 49.1
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 1.5e-17 94.4 119 48.7
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 1.9e-17 94.0 80 60.0
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 9.5e-17 91.7 107 50.5
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 1.6e-16 90.9 126 45.2
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 4.7e-16 89.4 116 47.4
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 8.1e-16 88.6 57 70.2
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 1.1e-15 88.2 120 50.0
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.4e-15 87.8 79 57.0
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 1.4e-15 87.8 79 57.0
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.2e-14 84.7 111 45.0
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 4.1e-12 76.3 95 49.5
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 5.4e-12 75.9 106 46.2
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 6.0e-11 72.4 95 48.4
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 1.7e-10 70.9 95 47.4
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 1.7e-10 70.9 95 47.4
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 3.9e-10 69.7 62 58.1
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 2.8e-08 63.5 117 39.3
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 8.9e-07 58.5 80 45.0
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.5e-06 57.8 43 62.8


User provided reference genes

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