Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 3.2e-198 694.9 351 100.0
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.4e-185 652.1 354 93.5
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 2.0e-155 552.7 360 81.1
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 7.2e-150 534.3 362 77.1
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 3.6e-149 531.9 362 76.8
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 4.0e-108 395.6 365 60.0
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 7.6e-107 391.3 336 58.9
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 9.3e-105 384.4 357 57.4
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 2.1e-104 383.3 355 58.3
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 4.6e-96 355.5 334 56.3
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 2.3e-95 353.2 348 56.9
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 8.7e-95 351.3 337 53.4
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 2.1e-93 346.7 361 51.8
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 2.8e-93 346.3 341 54.3
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 8.1e-93 344.7 350 52.3
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 1.8e-92 343.6 367 53.4
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 2.6e-91 339.7 344 54.4
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 4.5e-91 339.0 364 52.2
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 3.8e-90 335.9 354 53.4
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 6.4e-90 335.1 358 51.4
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 8.4e-90 334.7 341 54.0
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 1.1e-89 334.3 345 54.8
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 1.4e-89 334.0 344 54.1
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 1.2e-88 330.9 344 54.4
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 1.6e-88 330.5 360 51.1
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 3.0e-87 326.2 350 53.4
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 3.9e-87 325.9 349 52.4
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 3.3e-86 322.8 370 51.9
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 3.3e-86 322.8 370 51.9
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 3.3e-86 322.8 370 51.9
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 5.6e-86 322.0 355 52.7
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 7.4e-86 321.6 353 51.6
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 7.4e-86 321.6 339 53.1
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 1.3e-85 320.9 359 52.1
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 2.8e-85 319.7 356 48.3
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 2.8e-85 319.7 354 50.6
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 3.7e-85 319.3 363 51.8
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 6.2e-85 318.5 362 52.2
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 8.1e-85 318.2 364 50.3
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 8.1e-85 318.2 354 49.4
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 2.4e-84 316.6 231 70.1
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 2.4e-84 316.6 351 51.0
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 3.1e-84 316.2 340 52.1
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.0e-84 315.8 360 52.2
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 3.4e-83 312.8 206 74.3
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 2.9e-82 309.7 345 50.7
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 1.4e-81 307.4 367 48.2
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 3.2e-81 306.2 340 51.2
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 1.6e-80 303.9 357 49.9
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 1.8e-79 300.4 358 49.7
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 2.3e-79 300.1 349 50.4
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 3.9e-79 299.3 374 47.6
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 6.7e-79 298.5 344 48.5
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.5e-78 297.4 369 47.4
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 2.5e-78 296.6 362 47.5
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 9.6e-78 294.7 324 49.1
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 1.3e-77 294.3 327 49.2
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 1.3e-77 294.3 321 49.8
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 8.2e-77 291.6 374 47.1
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 6.9e-76 288.5 339 47.5
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 9.0e-76 288.1 339 46.6
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 4.5e-75 285.8 339 46.3
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 8.4e-74 281.6 311 49.8
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 3.2e-73 279.6 354 45.8
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 3.2e-73 279.6 337 45.7
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 4.2e-73 279.3 320 47.5
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 1.3e-71 274.2 338 46.4
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 1.8e-71 273.9 329 45.3
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 3.0e-71 273.1 340 45.6
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 3.0e-71 273.1 357 42.9
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 1.1e-70 271.2 340 46.5
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 2.2e-69 266.9 353 45.6
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.8e-68 263.8 355 42.8
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 5.3e-68 262.3 339 44.2
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 8.5e-66 255.0 290 48.6
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 1.9e-65 253.8 333 44.4
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 2.5e-65 253.4 341 45.5
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 5.5e-65 252.3 344 43.9
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 7.9e-64 248.4 334 44.6
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 1.0e-63 248.1 283 47.0
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 1.8e-63 247.3 341 41.9
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 1.8e-63 247.3 341 41.9
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 1.8e-63 247.3 341 41.9
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 5.1e-63 245.7 339 41.6
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 6.7e-63 245.4 351 44.2
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.1e-62 244.6 355 43.7
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 2.0e-62 243.8 337 40.9
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.7e-61 240.7 334 44.6
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 6.3e-61 238.8 325 42.5
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 8.2e-61 238.4 325 42.5
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 1.1e-60 238.0 326 44.2
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 3.4e-59 233.0 343 41.7
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 4.5e-59 232.6 268 50.4
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 2.2e-58 230.3 325 44.3
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 1.4e-57 227.6 339 40.1
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 6.1e-56 222.2 322 42.5
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 2.3e-55 220.3 320 40.6
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 1.0e-50 204.9 258 44.6
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 8.5e-50 201.8 329 37.4
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 1.2e-48 198.0 325 39.4
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 3.0e-47 193.4 337 36.8
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 5.9e-43 179.1 329 36.2
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 6.5e-42 175.6 348 36.5
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.2e-40 171.4 257 43.6
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 1.8e-39 167.5 316 33.9
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 7.5e-38 162.2 190 43.2
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 9.8e-38 161.8 183 44.3
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.4e-36 157.9 180 47.2
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.2e-35 154.8 151 53.0
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 1.2e-35 154.8 153 47.1
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 5.9e-35 152.5 308 32.8
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 1.0e-34 151.8 132 54.5
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 1.9e-33 147.5 299 33.1
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 8.8e-31 138.7 314 33.4
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 2.7e-27 127.1 101 54.5
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 1.2e-24 118.2 263 31.2
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 5.2e-23 112.8 93 52.7
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 2.2e-21 107.5 141 41.1
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 2.4e-20 104.0 109 45.0
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 2.4e-20 104.0 109 45.0
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 5.4e-20 102.8 108 45.4
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 5.4e-20 102.8 108 45.4
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 1.2e-19 101.7 108 45.4
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 1.6e-19 101.3 109 45.0
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 4.6e-19 99.8 155 36.1
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 7.8e-19 99.0 108 45.4
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 5.0e-18 96.3 112 43.8
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 5.0e-18 96.3 112 43.8
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 9.5e-17 92.0 96 45.8
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 1.6e-16 91.3 186 32.8
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 2.1e-16 90.9 93 49.5
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 4.4e-14 83.2 61 59.0
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 7.0e-12 75.9 80 46.2
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 1.5e-06 58.2 108 35.2


User provided reference genes

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