Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 8.1e-123 443.7 221 100.0
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 4.5e-97 358.2 198 93.9
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 2.8e-83 312.4 199 79.9
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 2.2e-80 302.8 196 79.1
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 2.9e-80 302.4 196 79.1
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.1e-79 300.4 198 78.3
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 5.7e-52 208.4 196 57.7
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 9.8e-44 181.0 200 52.5
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 1.4e-42 177.2 195 52.3
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 1.3e-35 154.1 186 45.2
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 2.9e-35 152.9 181 47.5
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 4.6e-33 145.6 124 61.3
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.0e-32 144.4 134 57.5
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 1.5e-31 140.6 187 42.8
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 2.5e-31 139.8 197 43.7
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.6e-30 137.1 198 42.4
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 8.0e-30 134.8 186 41.4
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 1.4e-29 134.0 192 41.1
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 5.2e-29 132.1 185 38.9
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 8.9e-29 131.3 182 42.3
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 7.5e-28 128.3 196 38.3
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 1.7e-27 127.1 194 38.1
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 1.4e-26 124.0 177 41.2
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 3.2e-26 122.9 211 36.0
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 4.1e-26 122.5 204 36.3
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 7.0e-26 121.7 202 34.2
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 9.2e-26 121.3 211 36.0
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 1.2e-25 120.9 178 37.6
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 2.7e-25 119.8 225 32.4
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 2.3e-24 116.7 189 38.1
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 5.0e-24 115.5 205 37.6
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 6.6e-24 115.2 198 35.9
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 1.1e-23 114.4 192 35.4
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 3.3e-23 112.8 199 34.2
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 4.3e-23 112.5 194 35.1
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 4.3e-23 112.5 194 36.1
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 5.6e-23 112.1 194 35.6
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 9.5e-23 111.3 197 34.0
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 9.5e-23 111.3 217 32.7
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 9.5e-23 111.3 184 36.4
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 1.2e-22 110.9 185 36.8
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 2.8e-22 109.8 209 36.4
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 4.7e-22 109.0 217 32.3
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 4.7e-22 109.0 208 35.1
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 6.2e-22 108.6 186 33.9
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.1e-21 107.8 177 40.1
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 1.1e-21 107.8 205 33.7
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.1e-21 107.8 205 33.7
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 1.1e-21 107.8 180 36.7
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 1.4e-21 107.5 108 49.1
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 1.8e-21 107.1 196 34.2
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.8e-21 107.1 160 41.2
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 2.3e-21 106.7 183 37.7
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 2.3e-21 106.7 201 33.8
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 3.1e-21 106.3 184 36.4
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 4.0e-21 105.9 209 35.4
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 4.0e-21 105.9 188 37.2
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 5.2e-21 105.5 205 33.2
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 5.2e-21 105.5 194 36.1
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 6.8e-21 105.1 215 31.2
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 8.9e-21 104.8 199 35.7
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.2e-20 104.4 196 33.7
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 3.4e-20 102.8 183 37.2
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 3.4e-20 102.8 188 37.8
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 4.4e-20 102.4 206 33.0
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 4.4e-20 102.4 178 37.1
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 5.8e-20 102.1 185 34.6
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 5.8e-20 102.1 191 34.0
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.9e-19 99.8 202 33.7
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 3.7e-19 99.4 192 34.9
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 6.4e-19 98.6 226 31.4
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 1.4e-18 97.4 188 34.6
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 3.2e-18 96.3 199 32.2
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 2.1e-17 93.6 190 34.2
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 6.0e-17 92.0 178 34.8
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 1.3e-16 90.9 190 32.1
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 2.3e-16 90.1 132 38.6
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 6.6e-16 88.6 96 45.8
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 8.6e-16 88.2 167 34.1
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 5.6e-15 85.5 189 29.6
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 1.6e-14 84.0 173 30.6
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 1.1e-13 81.3 163 32.5
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.3e-11 74.3 190 30.5
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 1.7e-11 73.9 171 33.9
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 3.8e-11 72.8 172 33.7
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 4.9e-11 72.4 87 36.8
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 6.4e-11 72.0 135 29.6
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 2.4e-10 70.1 53 62.3
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 9.2e-10 68.2 130 38.5
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 4.6e-09 65.9 173 33.5
Os10g0430700 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 4.6e-09 65.9 181 27.6
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.7e-08 63.9 196 28.6
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 1.7e-08 63.9 146 32.9
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 3.9e-08 62.8 222 29.7
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 3.9e-08 62.8 192 31.2
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 8.6e-08 61.6 190 28.9
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 1.9e-07 60.5 194 27.3
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 3.3e-07 59.7 188 28.2
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 3.3e-07 59.7 188 28.2
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 7.3e-07 58.5 162 29.6
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 1.6e-06 57.4 145 30.3
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 1.6e-06 57.4 145 30.3
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 1.6e-06 57.4 117 35.0
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 2.1e-06 57.0 182 26.9
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 4.7e-06 55.8 153 31.4


User provided reference genes

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