Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001919g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.8e-57 224.6 110 100.0
Nitab4.5_0000780g0130 Nicotiana tabacum HOM05D012456 ORTHO05D000022 1.2e-42 176.4 102 82.4
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 1.9e-40 169.1 102 78.4
Nitab4.5_0001115g0120 Nicotiana tabacum HOM05D012456 ORTHO05D000022 4.3e-40 167.9 104 79.8
Nitab4.5_0002253g0030 Nicotiana tabacum HOM05D009389 ORTHO05D004636 6.2e-39 164.1 102 80.4
Nitab4.5_0010074g0040 Nicotiana tabacum HOM05D009389 ORTHO05D012243 1.9e-32 142.5 84 82.1
Nitab4.5_0005955g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.0e-25 118.6 86 70.9
Nitab4.5_0002089g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.2e-21 106.7 67 70.1
Nitab4.5_0002499g0140 Nicotiana tabacum HOM05D009389 ORTHO05D004636 9.2e-19 97.1 82 52.4
Nitab4.5_0001519g0220 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.3e-17 93.2 76 56.6
Nitab4.5_0007618g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.7e-17 92.8 82 50.0
Nitab4.5_0000009g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.9e-16 89.4 69 56.5
CAN.G681.24 Capsicum annuum HOM05D000016 ORTHO05D000109 1.5e-13 79.7 96 35.4
Nitab4.5_0004274g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 3.8e-12 75.1 82 43.9
Nitab4.5_0000629g0070 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.2e-11 72.0 59 55.9
Nitab4.5_0013367g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 7.1e-11 70.9 82 42.7
Nitab4.5_0010207g0010 Nicotiana tabacum HOM05D009389 ORTHO05D012243 2.1e-10 69.3 55 56.4
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 7.8e-10 67.4 102 40.2
Nitab4.5_0000593g0290 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.3e-09 66.6 79 43.0
Nitab4.5_0006004g0030 Nicotiana tabacum HOM05D012456 ORTHO05D012243 1.7e-09 66.2 38 78.9
Nitab4.5_0000685g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.3e-09 65.9 78 38.5
Nitab4.5_0002346g0070 Nicotiana tabacum HOM05D011052 ORTHO05D004636 3.9e-09 65.1 88 37.5
Nitab4.5_0001671g0080 Nicotiana tabacum HOM05D012456 ORTHO05D012243 8.7e-09 63.9 38 84.2
Nitab4.5_0000411g0070 Nicotiana tabacum HOM05D000003 ORTHO05D004636 1.1e-08 63.5 83 41.0
Nitab4.5_0005185g0060 Nicotiana tabacum HOM05D012456 ORTHO05D004636 1.1e-08 63.5 110 36.4
PGSC0003DMG400019143 Solanum tuberosum HOM05D012456 ORTHO05D000022 1.1e-08 63.5 78 42.3
Nitab4.5_0013383g0010 Nicotiana tabacum HOM05D012456 ORTHO05D004636 1.9e-08 62.8 76 40.8
Nitab4.5_0007586g0060 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.3e-08 62.0 70 45.7
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.3e-08 61.6 93 36.6
QL03p058466 Quercus lobata HOM05D000003 ORTHO05D000022 4.3e-08 61.6 84 39.3
PGSC0003DMG400026063 Solanum tuberosum HOM05D009389 ORTHO05D004636 4.3e-08 61.6 77 33.8
Nitab4.5_0001175g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.6e-08 61.2 81 37.0
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 5.6e-08 61.2 83 38.6
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 2.1e-07 59.3 66 43.9
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 2.1e-07 59.3 86 39.5
FvH4_5g29280 Fragaria vesca HOM05D004278 ORTHO05D005544 2.8e-07 58.9 102 35.3
Nitab4.5_0002611g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.6e-07 58.5 77 40.3
RcHm_v2.0_Chr2g0127141 Rosa chinensis HOM05D000003 ORTHO05D000022 4.8e-07 58.2 95 37.9
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.2e-07 57.8 77 40.3
CAN.G1264.3 Capsicum annuum HOM05D002076 ORTHO05D002087 6.2e-07 57.8 91 38.5
Nitab4.5_0004734g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000022 6.2e-07 57.8 79 35.4
Nitab4.5_0002946g0020 Nicotiana tabacum HOM05D011052 ORTHO05D004636 8.1e-07 57.4 75 34.7
Nitab4.5_0026829g0010 Nicotiana tabacum HOM05D008306 ORTHO05D004636 8.1e-07 57.4 89 25.8
QL01p018278 Quercus lobata HOM05D000003 ORTHO05D000022 8.1e-07 57.4 86 38.4
Peaxi162Scf00013g03439 Petunia axillaris HOM05D012456 ORTHO05D004636 1.1e-06 57.0 62 40.3
Nitab4.5_0003210g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.4e-06 56.6 98 35.7
CAN.G108.54 Capsicum annuum HOM05D000003 ORTHO05D000006 1.8e-06 56.2 75 40.0
SHI31029 Sapria himalayana HOM05D004990 ORTHO05D000022 1.8e-06 56.2 94 33.0
SHI36923 Sapria himalayana HOM05D004990 ORTHO05D000022 1.8e-06 56.2 93 35.5
QL10p004071 Quercus lobata HOM05D001287 ORTHO05D001226 2.4e-06 55.8 79 31.6
RcHm_v2.0_Chr2g0144631 Rosa chinensis HOM05D000003 ORTHO05D000022 2.4e-06 55.8 90 33.3
Nitab4.5_0002091g0100 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.1e-06 55.5 70 44.3
Nitab4.5_0005472g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 3.1e-06 55.5 96 31.2
QL02p099447 Quercus lobata HOM05D000003 ORTHO05D000022 3.1e-06 55.5 84 38.1
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.0e-06 55.1 86 32.6
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.0e-06 55.1 91 35.2
QL06p035443 Quercus lobata HOM05D000003 ORTHO05D000022 4.0e-06 55.1 82 35.4
QL09p018494 Quercus lobata HOM05D000003 ORTHO05D000022 4.0e-06 55.1 85 36.5
FvH4_2g06731 Fragaria vesca HOM05D000003 ORTHO05D020649 5.3e-06 54.7 70 35.7
FvH4_2g12061 Fragaria vesca HOM05D000003 ORTHO05D000022 5.3e-06 54.7 91 36.3
FvH4_5g34262 Fragaria vesca HOM05D000003 ORTHO05D000022 5.3e-06 54.7 91 39.6
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 5.3e-06 54.7 95 35.8
ATR0626G376 Amborella trichopoda HOM05D004588 ORTHO05D005365 6.9e-06 54.3 87 33.3
Aqoxy4G02038 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 6.9e-06 54.3 91 34.1
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 6.9e-06 54.3 91 39.6
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 6.9e-06 54.3 92 34.8
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 9.0e-06 53.9 80 32.5
RcHm_v2.0_Chr2g0125461 Rosa chinensis HOM05D000003 ORTHO05D000022 9.0e-06 53.9 92 40.2


User provided reference genes

Program Settings