Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-75 285.8 140 100.0
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-55 219.9 137 82.5
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 1.2e-55 219.9 139 82.0
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.2e-55 219.9 139 82.0
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.3e-53 211.5 137 81.0
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.0e-50 202.6 141 75.9
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.4e-50 201.8 134 78.4
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 5.6e-45 184.5 129 77.5
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 1.3e-41 173.3 91 91.2
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 1.3e-41 173.3 91 91.2
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 1.1e-40 170.2 91 90.1
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 1.1e-40 170.2 91 90.1
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-40 169.9 91 89.0
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 3.2e-40 168.7 91 89.0
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.2e-40 168.7 126 69.8
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 5.4e-40 167.9 91 89.0
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 9.3e-40 167.2 88 90.9
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 1.3e-38 163.3 92 85.9
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.3e-37 158.7 90 83.3
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 9.6e-37 157.1 91 81.3
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.1e-36 156.0 135 63.7
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 3.1e-35 152.1 93 84.9
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.5e-34 149.8 139 64.7
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.8e-34 147.9 129 64.3
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 2.2e-33 146.0 91 79.1
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 5.4e-32 141.4 139 59.0
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 6.0e-31 137.9 79 79.7
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 1.5e-29 133.3 140 57.9
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.5e-29 133.3 140 57.9
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 4.3e-29 131.7 84 79.8
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 7.4e-29 131.0 80 85.0
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 1.4e-27 126.7 65 92.3
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 1.8e-27 126.3 84 77.4
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.3e-27 124.8 65 90.8
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.9e-27 124.4 65 90.8
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.2e-26 123.6 65 90.8
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.2e-26 123.6 65 90.8
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.2e-26 123.6 65 90.8
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 1.2e-26 123.6 65 90.8
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 1.2e-26 123.6 65 90.8
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 1.2e-26 123.6 65 90.8
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 1.2e-26 123.6 65 90.8
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 1.5e-26 123.2 66 89.4
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 2.0e-26 122.9 65 90.8
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.0e-26 122.9 65 89.2
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 3.4e-26 122.1 65 89.2
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 9.9e-26 120.6 65 89.2
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 9.9e-26 120.6 65 89.2
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 9.9e-26 120.6 65 89.2
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.9e-26 120.6 121 62.0
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 1.7e-25 119.8 65 89.2
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 3.8e-25 118.6 65 87.7
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.8e-25 118.6 65 87.7
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 3.8e-25 118.6 65 89.2
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 3.8e-25 118.6 65 87.7
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 8.4e-25 117.5 65 87.7
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 1.4e-24 116.7 65 87.7
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 1.4e-24 116.7 65 87.7
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 1.4e-24 116.7 65 87.7
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 1.9e-24 116.3 65 87.7
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 4.2e-24 115.2 64 87.5
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 5.5e-24 114.8 65 86.2
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 3.5e-23 112.1 81 67.9
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 4.6e-23 111.7 61 88.5
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.9e-22 108.6 126 54.8
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-21 107.1 127 52.0
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.5e-21 106.7 138 46.4
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 2.5e-21 105.9 77 70.1
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 4.3e-21 105.1 56 87.5
CSS0002325 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 5.6e-21 104.8 90 62.2
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 5.6e-21 104.8 77 68.8
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 4.8e-20 101.7 77 68.8
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 1.1e-19 100.5 110 59.1
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.1e-19 100.5 77 67.5
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.1e-19 100.5 77 67.5
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.1e-19 100.5 77 67.5
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.4e-19 100.1 76 68.4
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.4e-19 100.1 76 68.4
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.4e-19 100.1 76 68.4
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 1.2e-18 97.1 53 86.8
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.0e-18 96.3 132 47.7
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 4.5e-18 95.1 64 71.9
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.3e-17 93.6 71 69.0
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 1.7e-17 93.2 54 83.3
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 2.9e-17 92.4 52 86.5
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 2.9e-17 92.4 44 97.7
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 3.8e-17 92.0 66 66.7
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 1.9e-16 89.7 53 79.2
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 9.3e-16 87.4 46 87.0
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.2e-15 87.0 53 73.6
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 4.6e-15 85.1 64 64.1
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 6.0e-15 84.7 118 44.9
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 1.0e-14 84.0 53 71.7
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 1.8e-14 83.2 53 67.9
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 5.1e-14 81.6 81 60.5
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 6.7e-14 81.3 134 42.5
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.9e-13 79.7 53 67.9
CAN.G993.10 Capsicum annuum HOM05D000533 ORTHO05D001069 2.5e-13 79.3 51 84.3
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 6.3e-12 74.7 44 84.1
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 8.2e-12 74.3 44 81.8
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 3.1e-11 72.4 40 85.0
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 5.3e-11 71.6 53 62.3
Nitab4.5_0000734g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.0e-11 70.9 42 81.0
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 1.5e-10 70.1 53 62.3
Cpa.g.sc200.35 Carica papaya HOM05D000533 ORTHO05D001069 1.7e-09 66.6 69 55.1
Oeu014139.1 Olea europaea HOM05D000533 ORTHO05D007817 2.9e-09 65.9 52 63.5
ClCG05G017710 Citrullus lanatus HOM05D023369 ORTHO05D025092 6.5e-09 64.7 38 86.8
arahy.Tifrunner.gnm1.ann1.P8H99U Arachis hypogaea HOM05D014397 ORTHO05D001069 2.5e-08 62.8 41 85.4
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 5.5e-08 61.6 33 84.8
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 3.6e-07 58.9 33 81.8
SHI17974 Sapria himalayana HOM05D000533 ORTHO05D001069 2.3e-06 56.2 38 71.1


User provided reference genes

Program Settings