Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 2.1e-277 958.4 485 100.0
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 1.1e-268 929.5 476 98.7
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 1.4e-255 885.9 480 92.9
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 1.1e-254 882.9 480 92.1
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 4.4e-254 880.9 480 92.3
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 9.7e-254 879.8 480 92.1
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 2.5e-233 812.0 468 88.5
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 3.0e-215 751.9 481 79.6
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 5.2e-207 724.5 483 77.0
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 3.4e-206 721.8 481 75.3
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 3.4e-206 721.8 517 72.7
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 7.5e-206 720.7 481 76.1
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 3.2e-204 715.3 483 76.6
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 4.1e-204 714.9 482 76.1
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 3.9e-202 708.4 482 74.3
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 2.5e-201 705.7 480 74.6
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 2.1e-200 702.6 481 73.2
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 2.8e-200 702.2 481 74.0
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 2.8e-200 702.2 481 74.4
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 8.1e-200 700.7 481 72.8
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 1.4e-199 699.9 480 74.4
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 5.2e-199 698.0 477 73.8
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 5.2e-199 698.0 477 73.8
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 8.9e-199 697.2 481 73.6
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 2.6e-198 695.7 485 74.2
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 2.6e-198 695.7 481 74.4
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.4e-198 695.3 477 73.6
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 3.4e-198 695.3 481 74.0
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 9.9e-198 693.7 481 73.2
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 1.7e-197 693.0 481 73.2
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.1e-196 690.3 478 73.2
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 1.9e-196 689.5 478 74.7
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 3.2e-196 688.7 481 71.7
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.6e-195 686.4 484 71.5
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 2.7e-195 685.6 481 72.1
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 1.7e-194 682.9 481 71.7
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 8.6e-194 680.6 481 71.3
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 1.9e-193 679.5 480 72.1
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 2.5e-193 679.1 482 73.2
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 1.6e-192 676.4 481 71.7
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 1.6e-192 676.4 482 72.8
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 1.6e-192 676.4 481 71.1
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.8e-191 672.9 484 69.6
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 1.8e-191 672.9 481 71.5
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 2.3e-191 672.5 479 72.0
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 4.0e-191 671.8 484 70.5
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.2e-190 670.2 481 70.7
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 2.6e-190 669.1 498 68.5
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 3.4e-190 668.7 481 71.9
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 5.8e-190 667.9 482 72.4
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 5.8e-190 667.9 482 72.4
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 7.6e-190 667.5 475 71.4
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 7.6e-190 667.5 481 70.9
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 7.6e-190 667.5 481 69.2
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.9e-189 665.6 484 68.6
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 2.4e-188 662.5 513 67.1
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 2.4e-188 662.5 481 71.5
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 5.4e-188 661.4 481 69.4
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 1.0e-186 657.1 536 65.7
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 1.3e-186 656.8 480 68.5
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 8.6e-186 654.1 481 69.4
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 8.6e-186 654.1 481 69.4
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 1.1e-185 653.7 481 68.8
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 2.8e-184 649.0 479 68.7
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.8e-183 646.4 481 69.2
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 9.0e-183 644.0 479 68.5
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 2.2e-181 639.4 481 69.0
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.9e-181 638.3 484 66.5
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.1e-180 637.1 486 67.5
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.2e-179 633.6 481 68.2
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 7.8e-179 630.9 481 68.0
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 1.7e-178 629.8 480 69.0
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 6.6e-178 627.9 482 69.3
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 2.5e-177 625.9 480 69.4
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 7.3e-177 624.4 425 74.6
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 2.8e-176 622.5 479 67.4
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 1.8e-175 619.8 479 67.0
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 2.4e-175 619.4 427 74.5
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 1.5e-174 616.7 481 65.9
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 2.6e-174 615.9 448 73.0
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 3.4e-174 615.5 481 66.1
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 3.4e-174 615.5 481 66.1
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 3.4e-174 615.5 481 66.1
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 1.3e-173 613.6 481 66.3
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 1.0e-170 604.0 481 66.5
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 3.0e-170 602.4 489 65.4
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 2.1e-168 596.3 475 67.8
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 5.3e-167 591.7 384 79.2
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 6.9e-167 591.3 487 63.2
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 9.9e-166 587.4 482 66.4
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 2.2e-165 586.3 483 63.1
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 3.2e-164 582.4 425 68.9
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 2.1e-160 569.7 481 63.6
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 4.8e-160 568.5 414 72.5
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 6.2e-160 568.2 477 63.3
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 8.2e-160 567.8 381 76.6
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 5.8e-158 561.6 501 60.3
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 8.4e-157 557.8 477 62.9
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 4.8e-152 542.0 382 72.0
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 2.4e-151 539.7 388 70.1
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.7e-149 533.5 581 52.5
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 1.3e-146 523.9 488 56.6
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 6.3e-144 515.0 344 77.9
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 6.1e-139 498.4 479 55.9
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 1.5e-129 467.2 811 39.7
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 8.5e-125 451.4 313 73.2
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 9.4e-124 448.0 479 52.6
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 1.0e-122 444.5 381 59.8
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.5e-116 424.1 313 69.0
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 9.4e-116 421.4 347 62.2
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 1.1e-108 397.9 456 50.7
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 3.3e-108 396.4 457 50.5
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 2.3e-106 390.2 455 49.0
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.3e-104 384.4 457 50.1
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.4e-103 380.9 455 49.5
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 4.1e-103 379.4 456 48.7
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 5.9e-102 375.6 456 47.8
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 5.0e-101 372.5 479 46.3
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 1.6e-99 367.5 442 47.1
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 5.2e-98 362.5 456 47.1
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 2.6e-97 360.1 418 48.3
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 3.5e-94 349.7 378 51.9
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 1.0e-93 348.2 378 51.1
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 6.6e-93 345.5 500 44.0
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 6.6e-93 345.5 228 75.9
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 4.7e-91 339.3 240 72.1
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 5.2e-90 335.9 414 47.3
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 2.6e-89 333.6 249 69.1
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.9e-87 327.4 250 69.2
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 4.6e-78 296.2 455 43.3
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 3.6e-75 286.6 494 37.4
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 6.4e-56 222.6 316 42.7
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 4.2e-55 219.9 176 65.3
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 1.2e-49 201.8 218 52.3
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 4.6e-46 189.9 453 32.2
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 2.1e-43 181.0 520 30.4
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 1.8e-42 177.9 203 47.8
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 5.9e-33 146.4 102 68.6
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 8.5e-32 142.5 98 67.3
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 5.7e-20 103.2 90 56.7
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 2.7e-14 84.3 63 69.8
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 2.7e-14 84.3 142 35.2
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 1.3e-08 65.5 88 40.9
HanXRQChr01g0001151 Helianthus annuus HOM05D001663 ORTHO05D005717 2.1e-06 58.2 141 34.8


User provided reference genes

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