Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 5.7e-104 380.9 195 100.0
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.6e-37 160.2 95 89.5
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 5.6e-27 125.2 140 57.1
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 5.6e-27 125.2 132 59.8
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 1.6e-26 123.6 132 59.1
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 7.6e-24 114.8 102 65.7
Nitab4.5_0000943g0060 Nicotiana tabacum HOM05D007367 ORTHO05D008866 3.7e-18 95.9 106 60.4
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 5.8e-16 88.6 102 52.0
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 1.3e-15 87.4 115 49.6
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 1.7e-15 87.0 115 47.8
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 2.9e-15 86.3 116 47.4
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 3.8e-15 85.9 115 46.1
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 4.9e-15 85.5 115 47.0
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 4.9e-15 85.5 123 45.5
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 1.9e-14 83.6 119 42.0
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 1.9e-14 83.6 102 48.0
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 3.2e-14 82.8 115 45.2
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 3.2e-14 82.8 116 45.7
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 7.1e-14 81.6 120 41.7
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 1.2e-13 80.9 115 44.3
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 1.2e-13 80.9 120 42.5
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 1.6e-13 80.5 144 43.8
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 2.1e-13 80.1 99 48.5
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 3.5e-13 79.3 85 54.1
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 4.6e-13 79.0 99 47.5
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 4.6e-13 79.0 115 42.6
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 4.6e-13 79.0 121 40.5
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 7.9e-13 78.2 112 43.8
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 7.9e-13 78.2 107 45.8
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 3.0e-12 76.3 115 40.9
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 8.7e-12 74.7 105 44.8
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 1.1e-11 74.3 108 43.5
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 1.9e-11 73.6 99 44.4
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 1.9e-11 73.6 115 41.7
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 2.5e-11 73.2 115 41.7
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 3.3e-11 72.8 99 43.4
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 3.3e-11 72.8 112 44.6
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 4.3e-11 72.4 112 42.9
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 7.4e-11 71.6 125 39.2
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 7.4e-11 71.6 115 38.3
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 9.6e-11 71.2 118 39.8
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 9.6e-11 71.2 115 40.0
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 1.6e-10 70.5 112 40.2
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 2.1e-10 70.1 126 35.7
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 2.1e-10 70.1 115 38.3
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 2.8e-10 69.7 118 39.0
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 4.8e-10 68.9 115 40.9
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 4.8e-10 68.9 121 38.0
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 6.2e-10 68.6 99 41.4
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 6.2e-10 68.6 109 39.4
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 6.2e-10 68.6 112 42.9
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 1.4e-09 67.4 98 40.8
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 1.4e-09 67.4 182 32.4
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 1.8e-09 67.0 115 35.7
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.8e-09 67.0 112 38.4
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 1.8e-09 67.0 109 37.6
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 3.1e-09 66.2 99 39.4
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 4.0e-09 65.9 115 40.0
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 5.3e-09 65.5 107 38.3
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 6.9e-09 65.1 107 38.3
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 9.0e-09 64.7 130 33.8
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 1.2e-08 64.3 98 38.8
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 1.2e-08 64.3 126 33.3
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 2.0e-08 63.5 99 40.4
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 2.6e-08 63.2 99 40.4
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 2.6e-08 63.2 99 40.4
Nitab4.5_0009213g0020 Nicotiana tabacum HOM05D007367 ORTHO05D008866 2.6e-08 63.2 49 73.5
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 3.4e-08 62.8 124 36.3
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 3.4e-08 62.8 128 33.6
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 5.8e-08 62.0 116 36.2
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 1.3e-07 60.8 116 36.2
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 1.7e-07 60.5 116 36.2
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 1.7e-07 60.5 99 39.4
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 1.7e-07 60.5 115 35.7
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 2.9e-07 59.7 121 36.4
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 2.9e-07 59.7 114 36.8
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 3.8e-07 59.3 100 40.0
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 3.8e-07 59.3 129 29.5
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 8.4e-07 58.2 97 36.1
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 1.1e-06 57.8 99 37.4
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 1.4e-06 57.4 87 43.7
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 1.4e-06 57.4 99 38.4
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 1.9e-06 57.0 103 35.0
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 2.5e-06 56.6 97 36.1
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 5.5e-06 55.5 97 35.1
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 9.3e-06 54.7 78 44.9


User provided reference genes

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