Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.7e-120 436.0 217 100.0
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.4e-97 358.2 321 64.8
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.3e-64 250.4 283 55.1
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 7.8e-62 241.1 280 55.4
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 2.3e-61 239.6 279 53.4
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 2.1e-59 233.0 279 52.3
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 5.1e-53 211.8 279 48.4
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 8.1e-51 204.5 236 52.1
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 1.3e-48 197.2 246 50.0
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 2.9e-48 196.1 286 44.8
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.2e-46 190.7 279 43.4
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.6e-46 190.3 251 47.8
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 6.7e-45 184.9 289 41.5
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 8.7e-45 184.5 246 47.2
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 1.5e-44 183.7 280 42.9
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 1.5e-44 183.7 245 46.1
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 2.5e-44 183.0 253 45.1
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 5.6e-44 181.8 291 43.3
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 7.4e-44 181.4 279 44.4
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.3e-43 180.6 248 45.6
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 2.8e-43 179.5 253 43.9
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 3.6e-43 179.1 248 46.0
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 6.2e-43 178.3 245 44.5
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 8.1e-43 177.9 246 44.3
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 8.1e-43 177.9 245 44.9
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.1e-42 177.6 248 46.4
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.1e-42 177.6 248 46.8
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 5.3e-42 175.3 285 43.2
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 6.9e-42 174.9 285 41.8
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 6.9e-42 174.9 285 41.8
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 9.0e-42 174.5 235 44.3
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 9.0e-42 174.5 245 46.1
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 2.6e-41 172.9 280 41.1
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 3.4e-41 172.6 233 46.8
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 5.8e-41 171.8 233 44.6
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 9.9e-41 171.0 244 44.3
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.3e-40 170.6 246 43.1
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.7e-40 170.2 240 44.6
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.7e-40 170.2 247 42.1
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 2.2e-40 169.9 252 42.9
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 2.9e-40 169.5 245 44.5
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.9e-40 169.5 181 56.9
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 4.9e-40 168.7 270 42.2
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 6.4e-40 168.3 253 43.9
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 6.4e-40 168.3 250 42.0
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 8.4e-40 167.9 248 44.4
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 8.4e-40 167.9 248 44.4
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.4e-39 167.2 249 45.0
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 3.2e-39 166.0 245 46.1
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 4.2e-39 165.6 165 58.8
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 1.2e-38 164.1 200 47.0
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.6e-38 163.7 249 44.6
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 4.6e-38 162.2 246 41.1
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 7.9e-38 161.4 250 40.0
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 7.9e-38 161.4 227 41.9
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 1.0e-37 161.0 252 41.7
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 2.3e-37 159.8 208 43.3
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 2.3e-37 159.8 252 43.7
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 3.0e-37 159.5 193 48.7
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 3.0e-37 159.5 218 43.1
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 5.1e-37 158.7 207 44.4
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 6.7e-37 158.3 246 43.5
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 8.7e-37 157.9 256 42.2
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.5e-36 157.1 221 43.9
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.9e-36 156.8 243 41.2
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 2.5e-36 156.4 211 42.2
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 2.5e-36 156.4 245 41.6
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 3.3e-36 156.0 251 40.2
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 4.3e-36 155.6 218 43.1
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 5.6e-36 155.2 246 42.3
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 5.6e-36 155.2 248 42.7
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 3.7e-35 152.5 246 41.1
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 4.8e-35 152.1 225 41.8
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 8.1e-35 151.4 226 42.9
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 1.8e-34 150.2 233 40.3
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 2.4e-34 149.8 224 42.0
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 3.1e-34 149.4 245 41.6
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 3.1e-34 149.4 245 41.6
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 4.0e-34 149.1 230 41.7
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 4.0e-34 149.1 287 37.6
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 4.0e-34 149.1 245 44.9
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 9.0e-34 147.9 246 40.2
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.2e-33 147.5 263 38.0
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.6e-33 146.4 266 39.1
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 5.8e-33 145.2 220 41.4
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 7.6e-33 144.8 200 43.5
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.3e-32 144.1 207 42.0
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.7e-32 143.7 224 41.1
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.7e-32 143.7 196 44.9
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.1e-30 136.7 200 42.5
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.1e-30 136.7 200 42.5
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.8e-29 133.7 260 37.3
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 6.7e-29 131.7 218 39.4
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 9.6e-28 127.9 206 38.3
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.8e-26 123.6 207 39.6
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.0e-24 117.9 218 36.7
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 5.5e-23 112.1 147 45.6
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.6e-22 109.4 76 73.7
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.8e-18 97.1 76 65.8
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 1.7e-16 90.5 187 34.2
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 8.5e-16 88.2 187 34.8
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 5.5e-15 85.5 139 42.4
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.6e-14 84.0 73 54.8
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.4e-13 80.9 91 46.2
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.7e-11 73.9 83 49.4
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 3.7e-11 72.8 186 27.4
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 4.5e-09 65.9 54 64.8
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.4e-07 60.8 42 64.3
Rhsim06G0079000 Rhododendron simsii HOM05D021265 ORTHO05D338543 1.9e-07 60.5 88 40.9


User provided reference genes

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