Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001906g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.6e-74 282.7 146 100.0
PGSC0003DMG400030765 Solanum tuberosum HOM05D001921 ORTHO05D001784 1.5e-21 106.7 160 46.2
Nitab4.5_0000059g0260 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.3e-20 103.6 157 46.5
Nitab4.5_0003070g0060 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.8e-20 102.1 149 46.3
Solyc06g054470.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 4.7e-18 95.1 153 43.8
Sopen06g019540 Solanum pennellii HOM05D001921 ORTHO05D001784 1.8e-17 93.2 153 43.8
CAN.G889.1 Capsicum annuum HOM05D001921 ORTHO05D001784 3.9e-17 92.0 186 40.9
Nitab4.5_0009936g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.9e-17 92.0 150 45.3
Peaxi162Scf00095g00034 Petunia axillaris HOM05D001921 ORTHO05D001784 5.2e-17 91.7 97 57.7
PGSC0003DMG400032113 Solanum tuberosum HOM05D001921 ORTHO05D001784 5.2e-17 91.7 185 40.0
Sopen01g032320 Solanum pennellii HOM05D001921 ORTHO05D001784 1.3e-15 87.0 173 41.0
Solyc01g080500.2 Solanum lycopersicum HOM05D001921 ORTHO05D001784 1.7e-15 86.7 174 40.8
Nitab4.5_0002295g0070 Nicotiana tabacum HOM05D001921 ORTHO05D001784 2.2e-15 86.3 148 43.2
Oeu032694.1 Olea europaea HOM05D001921 ORTHO05D001784 2.8e-15 85.9 125 48.8
CAN.G256.2 Capsicum annuum HOM05D001921 ORTHO05D001784 6.3e-15 84.7 121 48.8
Oeu022233.1 Olea europaea HOM05D001921 ORTHO05D001784 1.4e-14 83.6 130 47.7
Peaxi162Scf00769g00001 Petunia axillaris HOM05D001921 ORTHO05D001784 9.1e-14 80.9 148 41.9
unitig_748.g8567 Utricularia gibba HOM05D001921 ORTHO05D001784 1.7e-12 76.6 102 51.0
Lj6g0003156 Lotus japonicus HOM05D001921 ORTHO05D001784 3.8e-12 75.5 144 43.1
Lj6g0019677 Lotus japonicus HOM05D001921 ORTHO05D001784 3.8e-12 75.5 144 43.1
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 5.0e-12 75.1 151 42.4
Oeu037657.1 Olea europaea HOM05D001921 ORTHO05D001784 1.9e-11 73.2 122 46.7
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 3.2e-11 72.4 144 38.2
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 4.2e-11 72.0 153 39.9
SGA_v2.0_scaffold57G20294 Striga asiatica HOM05D001921 ORTHO05D001784 5.5e-11 71.6 165 40.6
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 1.6e-10 70.1 144 37.5
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 2.7e-10 69.3 151 39.7
Phvul.006G158900 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 6.1e-10 68.2 155 38.7
SGA_v2.0_scaffold142G35647 Striga asiatica HOM05D001921 ORTHO05D001784 8.0e-10 67.8 125 43.2
unitig_32.g11745 Utricularia gibba HOM05D001921 ORTHO05D001784 1.4e-09 67.0 151 39.1
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 2.3e-09 66.2 141 38.3
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 3.0e-09 65.9 179 35.8
SalBow2G1161 Salvia bowleyana HOM05D001921 ORTHO05D001784 5.2e-09 65.1 120 42.5
Glyma.15G100300 Glycine max HOM05D001921 ORTHO05D001784 8.8e-09 64.3 145 37.9
Ca_00585_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 1.2e-08 63.9 141 40.4
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.0e-08 63.2 104 43.3
Rhsim02G0016000 Rhododendron simsii HOM05D001921 ORTHO05D001784 3.3e-08 62.4 165 32.7
MSTRG.3970 Avicennia marina HOM05D001921 ORTHO05D001784 5.7e-08 61.6 117 41.9
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 5.7e-08 61.6 154 39.0
MELO3C021383.2 Cucumis melo HOM05D001921 ORTHO05D001784 5.7e-08 61.6 156 38.5
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 5.7e-08 61.6 104 43.3
Migut.N00134 Erythranthe guttata HOM05D001921 ORTHO05D001784 7.5e-08 61.2 103 45.6
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 7.5e-08 61.2 151 35.8
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 9.7e-08 60.8 165 32.1
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 9.7e-08 60.8 151 37.7
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 1.3e-07 60.5 101 41.6
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 1.3e-07 60.5 101 41.6
Actinidia32376 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.7e-07 60.1 161 36.6
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.7e-07 60.1 142 33.1
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 2.2e-07 59.7 138 34.1
CsaV3_6G005540 Cucumis sativus L. HOM05D001921 ORTHO05D001784 2.2e-07 59.7 156 37.8
ClCG06G005610 Citrullus lanatus HOM05D001921 ORTHO05D001784 3.7e-07 58.9 153 37.3
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 4.8e-07 58.5 144 34.0
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 4.8e-07 58.5 168 35.7
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 6.3e-07 58.2 155 36.8
FAN17G2860 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.1e-06 57.4 150 36.0
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.4e-06 57.0 140 30.0
Lalb_Chr15g0087151 Lupinus albus HOM05D001921 ORTHO05D001784 1.4e-06 57.0 137 40.9
RcHm_v2.0_Chr4g0420321 Rosa chinensis HOM05D001921 ORTHO05D001784 1.8e-06 56.6 151 37.7
Migut.G00240 Erythranthe guttata HOM05D001921 ORTHO05D001784 2.4e-06 56.2 150 34.0
SGA_v2.0_scaffold89G27578 Striga asiatica HOM05D001921 ORTHO05D001784 2.4e-06 56.2 128 37.5
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.4e-06 56.2 103 39.8
Actinidia00069 Actinidia chinensis HOM05D001921 ORTHO05D001784 4.1e-06 55.5 159 34.6
Sed0007577 Sechium edule HOM05D001921 ORTHO05D001784 4.1e-06 55.5 152 36.2
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 5.3e-06 55.1 142 33.8
FvH4_4g16740 Fragaria vesca HOM05D001921 ORTHO05D001784 7.0e-06 54.7 150 36.0
FAN12G2234 Fragaria x ananassa HOM05D001921 ORTHO05D001784 7.0e-06 54.7 150 36.0
FAN12G3386 Fragaria x ananassa HOM05D001921 ORTHO05D001784 7.0e-06 54.7 150 36.0
Thecc.04G273300 Theobroma cacao HOM05D001921 ORTHO05D001784 7.0e-06 54.7 141 33.3
FAN22G2319 Fragaria x ananassa HOM05D001921 ORTHO05D001784 9.1e-06 54.3 150 36.0


User provided reference genes

Program Settings