Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 0.0e+00 1176.8 596 100.0
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 4.1e-312 1074.3 596 91.3
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 4.2e-283 977.6 600 82.0
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 3.2e-275 951.4 600 81.5
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 1.8e-265 919.1 631 77.3
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 1.4e-246 856.3 528 80.3
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 5.0e-244 847.8 502 83.9
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.7e-204 716.5 602 61.6
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 5.6e-203 711.4 612 61.3
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 3.9e-196 688.7 610 58.7
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 9.0e-193 677.6 611 57.8
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 9.0e-193 677.6 611 57.9
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.9e-191 672.5 615 60.3
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 3.8e-191 672.2 611 58.8
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 1.0e-188 664.1 584 57.2
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 1.1e-185 654.1 615 56.9
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 1.5e-184 650.2 610 55.2
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 4.9e-183 645.2 610 58.4
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 8.4e-183 644.4 613 56.4
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 1.2e-181 640.6 614 53.9
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 7.9e-181 637.9 590 56.8
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.8e-180 636.7 582 57.2
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 3.3e-179 632.5 619 55.3
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 1.6e-178 630.2 603 54.1
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 6.9e-177 624.8 646 51.5
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 2.6e-176 622.9 682 51.8
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 4.5e-176 622.1 644 53.3
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 1.0e-175 620.9 588 55.6
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 4.9e-175 618.6 516 59.9
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 8.7e-172 607.8 577 56.7
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 4.3e-171 605.5 628 52.7
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.4e-169 599.7 606 53.1
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 4.5e-168 595.5 617 51.9
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 5.9e-168 595.1 617 52.5
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 6.5e-167 591.7 598 53.2
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.5e-166 589.7 568 54.4
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 3.2e-166 589.3 616 53.7
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 5.5e-166 588.6 603 52.9
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.7e-165 586.3 609 52.2
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 2.7e-165 586.3 583 52.7
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 2.3e-164 583.2 615 52.4
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 3.0e-164 582.8 567 54.1
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 3.9e-164 582.4 612 52.1
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.5e-163 579.7 611 51.9
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 3.3e-163 579.3 612 52.0
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 2.8e-162 576.2 612 52.0
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 3.7e-162 575.9 650 48.9
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 3.7e-162 575.9 566 53.4
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 1.8e-161 573.5 632 49.5
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 4.1e-161 572.4 611 51.7
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 5.3e-161 572.0 615 51.4
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 6.9e-161 571.6 519 55.9
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.0e-160 570.1 607 50.9
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 1.3e-159 567.4 589 52.0
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.7e-159 567.0 633 50.2
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.8e-159 565.8 614 51.0
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 1.1e-158 564.3 628 53.3
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 9.4e-158 561.2 546 54.0
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 9.4e-158 561.2 558 53.4
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 3.9e-156 555.8 559 53.5
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 8.8e-156 554.7 599 51.9
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.1e-155 554.3 564 54.1
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 3.1e-153 546.2 570 51.9
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 1.3e-151 540.8 570 52.8
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 1.7e-151 540.4 587 50.9
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.1e-150 537.7 624 48.9
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 2.1e-149 533.5 618 50.3
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 2.7e-149 533.1 489 58.7
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.7e-149 533.1 514 55.8
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 3.6e-149 532.7 585 50.4
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 3.6e-149 532.7 619 48.5
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 6.1e-149 531.9 613 49.8
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.0e-148 531.2 622 47.4
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 1.0e-148 531.2 593 50.1
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 2.8e-146 523.1 591 49.4
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 4.8e-146 522.3 613 49.1
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 4.8e-146 522.3 605 48.6
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 6.3e-146 521.9 595 49.4
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 7.7e-144 515.0 642 46.9
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 1.0e-143 514.6 592 48.1
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 1.0e-143 514.6 552 51.1
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 2.9e-143 513.1 561 52.2
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 3.0e-140 503.1 540 50.4
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 5.7e-139 498.8 576 49.3
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.3e-138 497.7 550 50.2
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.3e-138 495.4 422 58.1
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 2.4e-137 493.4 590 47.6
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 5.3e-137 492.3 508 52.2
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 2.7e-136 490.0 591 47.5
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 7.2e-134 481.9 547 49.2
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 3.6e-133 479.6 578 47.2
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 4.7e-133 479.2 588 46.3
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 4.0e-132 476.1 562 47.9
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 8.6e-127 458.4 526 48.1
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 3.3e-126 456.4 604 45.0
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 6.6e-119 432.2 486 48.1
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 4.0e-108 396.4 402 52.7
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 6.8e-92 342.4 450 45.6
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 9.3e-89 332.0 518 37.8
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 1.0e-87 328.6 590 36.4
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 5.3e-84 316.2 534 36.3
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 1.2e-83 315.1 467 39.8
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 1.3e-69 268.5 300 51.7
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 7.4e-62 242.7 189 66.1
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.9e-57 228.0 317 41.6
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.5e-54 217.6 201 55.2
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 2.2e-37 161.4 515 28.2
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 3.2e-33 147.5 468 29.5
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 1.6e-27 128.6 366 30.1
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 8.5e-26 122.9 575 23.7
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 4.2e-25 120.6 133 48.1
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 4.0e-23 114.0 68 79.4
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.5e-17 94.7 125 45.6
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.5e-17 94.7 125 45.6
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.2e-16 92.4 129 42.6
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.2e-16 92.4 129 42.6
CAN.G1274.30 Capsicum annuum HOM05D006562 ORTHO05D008230 6.1e-16 90.1 70 70.0
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 3.7e-13 80.9 119 39.5
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 3.3e-09 67.8 193 31.1
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 1.6e-08 65.5 70 52.9
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 4.7e-08 63.9 345 23.8
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 8.0e-08 63.2 299 24.1
BraA07t31822Z Brassica rapa HOM05D004094 ORTHO05D004601 2.3e-07 61.6 297 23.2
Thhalv10018028m.g Eutrema salsugineum HOM05D004094 ORTHO05D004601 8.9e-07 59.7 332 23.2


User provided reference genes

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