Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001891g0140 Nicotiana tabacum HOM05D001140 ORTHO05D000470 5.5e-47 190.7 98 100.0
Peaxi162Scf00362g00093 Petunia axillaris HOM05D001140 ORTHO05D000470 7.5e-12 73.9 95 52.6
CAN.G588.43 Capsicum annuum HOM05D001140 ORTHO05D000470 1.1e-10 70.1 81 55.6
CsaV3_2G015850 Cucumis sativus L. HOM05D001140 ORTHO05D000470 2.2e-08 62.4 85 49.4
MELO3C020799.2 Cucumis melo HOM05D001140 ORTHO05D000470 2.9e-08 62.0 103 46.6
ClCG02G011710 Citrullus lanatus HOM05D001140 ORTHO05D000470 5.0e-08 61.2 86 47.7
Ah.03g148820 Amaranthus hybridus HOM05D001140 ORTHO05D000470 6.5e-08 60.8 95 42.1
COL.COLO4_17299 Corchorus olitorius HOM05D001140 ORTHO05D000470 8.5e-08 60.5 67 53.7
Lj5C183T7 Lonicera japonica HOM05D001140 ORTHO05D000470 1.1e-07 60.1 88 46.6
Peaxi162Scf00553g10111 Petunia axillaris HOM05D001140 ORTHO05D000470 1.9e-07 59.3 67 50.7
Duzib132G0310 Durio zibethinus HOM05D001140 ORTHO05D000470 2.5e-07 58.9 70 52.9
Thecc.02G064000 Theobroma cacao HOM05D001140 ORTHO05D000470 2.5e-07 58.9 70 51.4
CiPaw.07G059100 Carya illinoinensis HOM05D001140 ORTHO05D000470 4.2e-07 58.2 75 46.7
Lsat_1_v5_gn_8_30760 Lactuca sativa HOM05D001140 ORTHO05D000470 4.2e-07 58.2 92 44.6
Ciclev10029600m.g Citrus clementina HOM05D001140 ORTHO05D000470 5.5e-07 57.8 94 43.6
ECA233G5859 Erigeron canadensis HOM05D001140 ORTHO05D000470 5.5e-07 57.8 85 43.5
arahy.Tifrunner.gnm1.ann1.9W3900 Arachis hypogaea HOM05D001140 ORTHO05D000470 7.2e-07 57.4 67 52.2
CSS0009078 Camellia sinensis var. sinensis HOM05D001140 ORTHO05D000470 7.2e-07 57.4 70 51.4
Glyma.16G127700 Glycine max HOM05D001140 ORTHO05D000470 7.2e-07 57.4 88 42.0
Dinv33632 Davidia involucrata HOM05D001140 ORTHO05D000470 9.4e-07 57.0 103 38.8
Lsat_1_v5_gn_2_13401 Lactuca sativa HOM05D001140 ORTHO05D000470 9.4e-07 57.0 83 44.6
PGSC0003DMG400009869 Solanum tuberosum HOM05D001140 ORTHO05D000470 9.4e-07 57.0 63 50.8
arahy.Tifrunner.gnm1.ann1.FH5FW8 Arachis hypogaea HOM05D001140 ORTHO05D000470 1.2e-06 56.6 84 46.4
MSTRG.19944 Avicennia marina HOM05D001140 ORTHO05D000470 1.2e-06 56.6 63 52.4
Cpa.g.sc6.258 Carica papaya HOM05D001140 ORTHO05D000470 1.2e-06 56.6 92 42.4
CiPaw.06G123900 Carya illinoinensis HOM05D001140 ORTHO05D000470 1.2e-06 56.6 70 50.0
DCAR_026003 Daucus carota HOM05D001140 ORTHO05D000470 1.2e-06 56.6 70 47.1
FAN27G3111 Fragaria x ananassa HOM05D001140 ORTHO05D000470 1.2e-06 56.6 67 49.3
Psat2g154440 Pisum sativum HOM05D001140 ORTHO05D000470 1.2e-06 56.6 84 44.0
Rhsim11G0190700 Rhododendron simsii HOM05D001140 ORTHO05D000470 1.2e-06 56.6 73 49.3
ECA238G2258 Erigeron canadensis HOM05D001140 ORTHO05D000470 1.6e-06 56.2 78 44.9
Glyma.02G047900 Glycine max HOM05D001140 ORTHO05D000470 1.6e-06 56.2 91 40.7
Potri.004G172300 Populus trichocarpa HOM05D001140 ORTHO05D000470 1.6e-06 56.2 67 49.3
Medtr5g022180 Medicago truncatula HOM05D001140 ORTHO05D000470 2.1e-06 55.8 91 41.8
Sabra04G0114500 Salix brachista HOM05D001140 ORTHO05D000470 2.1e-06 55.8 113 36.3
Sopen02g028630 Solanum pennellii HOM05D001140 ORTHO05D000470 2.1e-06 55.8 68 48.5
vmacro22136 Vaccinium macrocarpon HOM05D001140 ORTHO05D000470 2.1e-06 55.8 100 41.0
Atru.chr5.3280 Acer truncatum HOM05D001140 ORTHO05D000470 2.7e-06 55.5 67 49.3
arahy.Tifrunner.gnm1.ann1.GT74WW Arachis hypogaea HOM05D001140 ORTHO05D000470 2.7e-06 55.5 93 43.0
arahy.Tifrunner.gnm1.ann1.Y2Y1BJ Arachis hypogaea HOM05D001140 ORTHO05D000470 2.7e-06 55.5 93 43.0
Cfa005215 Carpinus fangiana HOM05D001140 ORTHO05D000470 2.7e-06 55.5 70 48.6
Haze_02173 Corylus avellana HOM05D001140 ORTHO05D000470 2.7e-06 55.5 70 48.6
Haze_02180 Corylus avellana HOM05D001140 ORTHO05D000470 2.7e-06 55.5 70 48.6
Duzib248G0700 Durio zibethinus HOM05D001140 ORTHO05D000470 2.7e-06 55.5 93 41.9
FvH4_2g01600 Fragaria vesca HOM05D001140 ORTHO05D000470 2.7e-06 55.5 67 47.8
FAN24G2909 Fragaria x ananassa HOM05D001140 ORTHO05D000470 2.7e-06 55.5 67 47.8
HanXRQChr12g0366911 Helianthus annuus HOM05D001140 ORTHO05D000470 2.7e-06 55.5 85 43.5
HanXRQChr13g0386711 Helianthus annuus HOM05D001140 ORTHO05D000470 2.7e-06 55.5 97 39.2
Lsat_1_v5_gn_3_72820 Lactuca sativa HOM05D001140 ORTHO05D000470 2.7e-06 55.5 63 52.4
MD10G1121200 Malus domestica HOM05D001140 ORTHO05D000470 2.7e-06 55.5 72 47.2
Phvul.002G108600 Phaseolus vulgaris HOM05D001140 ORTHO05D000470 2.7e-06 55.5 73 45.2
Potri.002G020700 Populus trichocarpa HOM05D001140 ORTHO05D000470 2.7e-06 55.5 93 41.9
Sed0012462 Sechium edule HOM05D001140 ORTHO05D000470 2.7e-06 55.5 64 51.6
Solyc02g083835.1 Solanum lycopersicum HOM05D001140 ORTHO05D000470 2.7e-06 55.5 71 47.9
TAR376G0112 Trochodendron aralioides HOM05D001140 ORTHO05D000470 2.7e-06 55.5 89 42.7
CANSAT01G0651 Cannabis sativa HOM05D001140 ORTHO05D000470 3.6e-06 55.1 68 48.5
Cpa.g.sc37.172 Carica papaya HOM05D001140 ORTHO05D000470 3.6e-06 55.1 67 49.3
FAN15G3527 Fragaria x ananassa HOM05D001140 ORTHO05D000470 3.6e-06 55.1 67 47.8
Glyma.11G077400 Glycine max HOM05D001140 ORTHO05D000470 3.6e-06 55.1 73 45.2
Gohir.A11G041900 Gossypium hirsutum HOM05D001140 ORTHO05D000470 3.6e-06 55.1 81 44.4
Lsat_1_v5_gn_2_13341 Lactuca sativa HOM05D001140 ORTHO05D000470 3.6e-06 55.1 64 48.4
Lj3g0004978 Lotus japonicus HOM05D001140 ORTHO05D000470 3.6e-06 55.1 88 43.2
PSO675G9397 Papaver somniferum HOM05D001140 ORTHO05D000470 3.6e-06 55.1 96 40.6
PGR142G1744 Punica granatum HOM05D001140 ORTHO05D000470 3.6e-06 55.1 67 49.3
GSVIVG01024057001 Vitis vinifera HOM05D001140 ORTHO05D000470 3.6e-06 55.1 75 48.0
CSS0003464 Camellia sinensis var. sinensis HOM05D001140 ORTHO05D000470 4.7e-06 54.7 73 46.6
FAN20G2943 Fragaria x ananassa HOM05D001140 ORTHO05D000470 4.7e-06 54.7 86 43.0
Medtr5g022130 Medicago truncatula HOM05D001140 ORTHO05D000470 4.7e-06 54.7 95 40.0
PSO541G5460 Papaver somniferum HOM05D001140 ORTHO05D000470 4.7e-06 54.7 74 45.9
QL11p049185 Quercus lobata HOM05D001140 ORTHO05D000470 4.7e-06 54.7 70 48.6
Solyc04g081530.1 Solanum lycopersicum HOM05D001140 ORTHO05D000470 4.7e-06 54.7 62 51.6
Sopen04g035140 Solanum pennellii HOM05D001140 ORTHO05D000470 4.7e-06 54.7 62 51.6
TPR.G18190 Trifolium pratense HOM05D001140 ORTHO05D000470 4.7e-06 54.7 91 39.6
Glyma.11G105800 Glycine max HOM05D001140 ORTHO05D000470 6.1e-06 54.3 67 49.3
Gohir.D02G225300 Gossypium hirsutum HOM05D001140 ORTHO05D000470 6.1e-06 54.3 94 40.4
Gohir.D11G182300 Gossypium hirsutum HOM05D001140 ORTHO05D000470 6.1e-06 54.3 68 48.5
Gorai.007G194100 Gossypium raimondii HOM05D001140 ORTHO05D000470 6.1e-06 54.3 68 48.5
Lsat_1_v5_gn_2_12921 Lactuca sativa HOM05D001140 ORTHO05D000470 6.1e-06 54.3 83 43.4
Lalb_Chr09g0321701 Lupinus albus HOM05D001140 ORTHO05D000470 6.1e-06 54.3 70 47.1
VMungo1127G0900 Vigna mungo HOM05D001140 ORTHO05D000470 6.1e-06 54.3 67 49.3
Glyma.12G030700 Glycine max HOM05D001140 ORTHO05D000470 8.0e-06 53.9 67 49.3
Lj2g0001364 Lotus japonicus HOM05D001140 ORTHO05D000470 8.0e-06 53.9 91 40.7
Lj3g0023760 Lotus japonicus HOM05D001140 ORTHO05D000470 8.0e-06 53.9 82 43.9
MD15G1244700 Malus domestica HOM05D001140 ORTHO05D000470 8.0e-06 53.9 71 45.1
Manes.04G077000 Manihot esculenta HOM05D001140 ORTHO05D000470 8.0e-06 53.9 90 43.3
Nitab4.5_0000864g0040 Nicotiana tabacum HOM05D001140 ORTHO05D000470 8.0e-06 53.9 98 38.8
QL02p011775 Quercus lobata HOM05D001140 ORTHO05D000470 8.0e-06 53.9 83 44.6
Rhsim10G0211600 Rhododendron simsii HOM05D001140 ORTHO05D000470 8.0e-06 53.9 103 39.8
Zm00001eb010480 Zea mays HOM05D001140 ORTHO05D000470 8.0e-06 53.9 85 41.2


User provided reference genes

Program Settings