Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001882g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 6.5e-54 213.8 106 100.0
Nitab4.5_0001626g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.5e-45 186.0 106 84.9
Nitab4.5_0001626g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 5.5e-45 184.1 106 84.0
Nitab4.5_0003765g0030 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.2e-44 183.0 107 84.1
Nitab4.5_0005404g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.1e-44 182.2 106 82.1
Nitab4.5_0005347g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 4.7e-44 181.0 106 81.1
Nitab4.5_0003165g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.2e-41 172.2 106 78.3
Nitab4.5_0001882g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.5e-37 159.5 85 88.2
CAN.G584.62 Capsicum annuum HOM05D009059 ORTHO05D011207 1.3e-22 109.8 105 54.3
Solyc07g006380.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.3e-22 109.8 104 55.8
Peaxi162Scf00297g00815 Petunia axillaris HOM05D009059 ORTHO05D011207 3.9e-22 108.2 106 51.9
Sopen07g002470 Solanum pennellii HOM05D009059 ORTHO05D011207 3.9e-22 108.2 104 56.7
Solyc11g028070.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.1e-21 106.7 106 53.8
Sopen11g012530 Solanum pennellii HOM05D009059 ORTHO05D011207 1.9e-21 105.9 106 53.8
Peaxi162Scf00297g00816 Petunia axillaris HOM05D009059 ORTHO05D011207 3.3e-21 105.1 103 51.5
CAN.G584.63 Capsicum annuum HOM05D009059 ORTHO05D011207 2.1e-20 102.4 98 55.1
Solyc11g028040.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.1e-20 102.4 106 52.8
Peaxi162Scf00005g00041 Petunia axillaris HOM05D009059 ORTHO05D011207 3.6e-20 101.7 106 50.0
Solyc07g150108.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 5.2e-19 97.8 93 52.7
CAN.G1610.5 Capsicum annuum HOM05D009059 ORTHO05D011207 7.5e-18 94.0 104 50.0
Peaxi162Scf00005g00035 Petunia axillaris HOM05D009059 ORTHO05D011207 9.8e-18 93.6 106 45.3
Nitab4.5_0005347g0040 Nicotiana tabacum HOM05D001775 ORTHO05D006205 2.2e-17 92.4 83 61.4
Solyc07g016095.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 8.3e-17 90.5 77 53.2
CAN.G534.6 Capsicum annuum HOM05D009059 ORTHO05D011207 1.9e-16 89.4 106 49.1
CAN.G584.65 Capsicum annuum HOM05D009059 ORTHO05D011207 5.4e-16 87.8 104 48.1
CAN.G584.64 Capsicum annuum HOM05D009059 ORTHO05D011207 7.1e-16 87.4 105 47.6
CAN.G584.67 Capsicum annuum HOM05D009059 ORTHO05D011207 1.6e-15 86.3 104 47.1
CAN.G1084.27 Capsicum annuum HOM05D009059 ORTHO05D011207 2.1e-15 85.9 104 47.1
CAN.G1084.24 Capsicum annuum HOM05D009059 ORTHO05D011207 6.2e-12 74.3 103 42.7
Solyc07g016120.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 7.6e-10 67.4 58 55.2
Sopen07g005870 Solanum pennellii HOM05D000082 ORTHO05D000038 7.6e-10 67.4 57 57.9
CAN.G5797.1 Capsicum annuum HOM05D009059 ORTHO05D011207 1.7e-09 66.2 57 50.9
CAN.G1610.6 Capsicum annuum HOM05D009059 ORTHO05D011207 2.9e-09 65.5 76 43.4
CAN.G3387.1 Capsicum annuum HOM05D009059 ORTHO05D011207 2.9e-09 65.5 83 42.2
CAN.G1084.28 Capsicum annuum HOM05D009059 ORTHO05D011207 4.1e-08 61.6 77 39.0
EL10Ac5g10885 Beta vulgaris HOM05D001231 ORTHO05D001012 7.1e-08 60.8 69 40.6
Migut.E00740 Erythranthe guttata HOM05D001231 ORTHO05D001012 9.2e-08 60.5 63 34.9
Medtr8g075980 Medicago truncatula HOM05D001231 ORTHO05D001012 9.2e-08 60.5 71 35.2
Cc02_g09620 Coffea canephora HOM05D018349 ORTHO05D011207 1.6e-07 59.7 71 39.4
AT2G31957 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 2.1e-07 59.3 45 51.1
EL10Ac5g10884 Beta vulgaris HOM05D001231 ORTHO05D001012 2.1e-07 59.3 49 46.9
Os04g0189400 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 2.1e-07 59.3 49 46.9
SalBow6G2289 Salvia bowleyana HOM05D001231 ORTHO05D001012 2.1e-07 59.3 72 38.9
Psat4g112360 Pisum sativum HOM05D001231 ORTHO05D001012 3.5e-07 58.5 77 40.3
Prupe.4G131400 Prunus persica HOM05D001231 ORTHO05D001012 3.5e-07 58.5 53 49.1
Aa31LG5G3920 Aethionema arabicum HOM05D001231 ORTHO05D001012 4.6e-07 58.2 78 37.2
Nitab4.5_0000374g0060 Nicotiana tabacum HOM05D001231 ORTHO05D001012 4.6e-07 58.2 78 35.9
Gohir.D02G139400 Gossypium hirsutum HOM05D001231 ORTHO05D001012 6.0e-07 57.8 50 42.0
Gorai.005G157500 Gossypium raimondii HOM05D001231 ORTHO05D001012 6.0e-07 57.8 50 42.0
MSTRG.2131 Avicennia marina HOM05D001231 ORTHO05D001012 7.8e-07 57.4 67 40.3
Migut.M01517 Erythranthe guttata HOM05D001231 ORTHO05D001012 7.8e-07 57.4 66 40.9
CARHR144790 Cardamine hirsuta HOM05D001231 ORTHO05D001012 1.0e-06 57.0 69 36.2
Gohir.A03G115800 Gossypium hirsutum HOM05D001231 ORTHO05D001012 1.0e-06 57.0 50 42.0
Psat4g112240 Pisum sativum HOM05D001231 ORTHO05D001012 1.0e-06 57.0 76 36.8
C03p57970 Brassica napus HOM05D001231 ORTHO05D001012 1.3e-06 56.6 48 41.7
Migut.F00873 Erythranthe guttata HOM05D001231 ORTHO05D001012 1.3e-06 56.6 49 49.0
Thhalv10017942m.g Eutrema salsugineum HOM05D001231 ORTHO05D001012 1.3e-06 56.6 45 46.7
C05p21990 Brassica napus HOM05D001231 ORTHO05D001012 1.7e-06 56.2 48 39.6
Migut.E00742 Erythranthe guttata HOM05D001231 ORTHO05D001012 2.3e-06 55.8 44 45.5
Carub.0002s0412 Capsella rubella HOM05D001231 ORTHO05D001012 3.0e-06 55.5 61 36.1
Cc06_g07880 Coffea canephora HOM05D001231 ORTHO05D001012 3.0e-06 55.5 78 34.6
FvH4_3g14470 Fragaria vesca HOM05D020793 ORTHO05D025367 3.0e-06 55.5 50 38.0
FAN21G1429 Fragaria x ananassa HOM05D020793 ORTHO05D025367 3.0e-06 55.5 50 38.0
Sopen07g001040 Solanum pennellii HOM05D018601 ORTHO05D018052 3.0e-06 55.5 66 39.4
PSO541G0662 Papaver somniferum HOM05D001231 ORTHO05D001012 3.9e-06 55.1 79 35.4
Phvul.002G278700 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 3.9e-06 55.1 66 39.4
C02p38770 Brassica napus HOM05D001231 ORTHO05D001012 5.1e-06 54.7 48 39.6
BolC5t30895H Brassica oleracea HOM05D001231 ORTHO05D001012 5.1e-06 54.7 48 37.5
CAN.G976.2 Capsicum annuum HOM05D001231 ORTHO05D001012 5.1e-06 54.7 78 34.6
FAN16G1567 Fragaria x ananassa HOM05D001231 ORTHO05D001012 5.1e-06 54.7 49 46.9
Psat4g112280 Pisum sativum HOM05D001231 ORTHO05D001012 5.1e-06 54.7 77 36.4
RcHm_v2.0_Chr5g0024061 Rosa chinensis HOM05D001231 ORTHO05D001012 5.1e-06 54.7 63 41.3
Solyc07g016113.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 5.1e-06 54.7 103 34.0
Lalb_Chr08g0237751 Lupinus albus HOM05D001231 ORTHO05D001012 6.6e-06 54.3 66 39.4
AT2G31953 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 8.6e-06 53.9 70 37.1
FvH4_3g14460 Fragaria vesca HOM05D020793 ORTHO05D025367 8.6e-06 53.9 52 36.5
FvH4_3g14600 Fragaria vesca HOM05D001231 ORTHO05D001012 8.6e-06 53.9 70 35.7
Medtr3g032570 Medicago truncatula HOM05D001231 ORTHO05D001012 8.6e-06 53.9 80 36.2
Os02g0212100 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 8.6e-06 53.9 68 39.7


User provided reference genes

Program Settings