Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001881g0060 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-54 215.3 104 100.0
Nitab4.5_0000603g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.0e-22 110.2 180 40.6
Nitab4.5_0003227g0060 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.3e-18 94.7 159 40.9
Nitab4.5_0008852g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-17 92.4 55 83.6
Nitab4.5_0001068g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.3e-17 90.9 55 81.8
Nitab4.5_0010194g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.1e-16 90.1 56 82.1
Nitab4.5_0001968g0080 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.4e-16 89.7 55 81.8
Nitab4.5_0021296g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.8e-16 89.4 55 80.0
Nitab4.5_0002096g0150 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.1e-16 88.2 54 79.6
Nitab4.5_0001663g0170 Nicotiana tabacum HOM05D001380 ORTHO05D001912 1.2e-15 86.7 55 80.0
Nitab4.5_0003443g0090 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.2e-15 86.7 84 54.8
Nitab4.5_0000807g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.5e-15 86.3 55 80.0
Nitab4.5_0002680g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.6e-15 85.5 55 80.0
Nitab4.5_0009425g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.6e-15 85.5 78 60.3
Nitab4.5_0001644g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.4e-15 85.1 55 78.2
Nitab4.5_0006018g0140 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.5e-15 84.7 77 61.0
Nitab4.5_0006596g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 5.9e-15 84.3 43 86.0
Nitab4.5_0002213g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 7.7e-15 84.0 78 60.3
Nitab4.5_0002522g0090 Nicotiana tabacum HOM05D002918 ORTHO05D003326 7.7e-15 84.0 53 79.2
Nitab4.5_0005663g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.0e-14 83.6 56 73.2
Nitab4.5_0010845g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.0e-14 83.6 55 76.4
Nitab4.5_0005196g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.3e-14 83.2 48 81.2
Nitab4.5_0008748g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.7e-14 82.8 55 76.4
Nitab4.5_0000196g0080 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-14 82.4 67 67.2
Nitab4.5_0001195g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-14 82.4 66 66.7
Nitab4.5_0008425g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-14 82.4 46 87.0
Nitab4.5_0001411g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.9e-14 82.0 55 76.4
Nitab4.5_0000775g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.5e-14 80.9 43 81.4
Nitab4.5_0000890g0140 Nicotiana tabacum HOM05D002918 ORTHO05D003326 8.5e-14 80.5 65 64.6
Nitab4.5_0005730g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 8.5e-14 80.5 55 76.4
Nitab4.5_0000939g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.4e-13 79.7 55 76.4
Nitab4.5_0002818g0090 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.4e-13 79.7 55 72.7
Nitab4.5_0003351g0100 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.4e-13 79.7 53 75.5
Nitab4.5_0007413g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.9e-13 79.3 50 78.0
Nitab4.5_0002715g0160 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.5e-13 79.0 55 72.7
Nitab4.5_0002388g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.2e-13 78.6 57 71.9
Nitab4.5_0003599g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.2e-13 78.2 47 85.1
Nitab4.5_0005757g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.2e-13 78.2 58 74.1
Nitab4.5_0001254g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 5.5e-13 77.8 55 74.5
Nitab4.5_0002957g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 5.5e-13 77.8 59 71.2
Nitab4.5_0003139g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 7.2e-13 77.4 55 74.5
Nitab4.5_0010173g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 9.4e-13 77.0 55 72.7
Nitab4.5_0002429g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.2e-12 76.6 55 74.5
Nitab4.5_0003860g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.2e-12 76.6 55 72.7
Nitab4.5_0001061g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.6e-12 76.3 74 58.1
Nitab4.5_0000969g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.1e-12 75.9 56 71.4
Nitab4.5_0003151g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.1e-12 75.9 57 70.2
Nitab4.5_0002346g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.7e-12 75.5 61 67.2
Nitab4.5_0011417g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.7e-12 75.5 60 66.7
Nitab4.5_0000184g0180 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.6e-12 74.7 55 70.9
Nitab4.5_0003677g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.1e-12 74.3 56 75.0
Nitab4.5_0006164g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.1e-12 74.3 61 68.9
Nitab4.5_0000510g0120 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.8e-11 72.8 54 70.4
Nitab4.5_0014900g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.8e-11 72.8 48 79.2
Nitab4.5_0002476g0060 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.3e-11 72.4 72 58.3
Nitab4.5_0001247g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.0e-11 72.0 65 61.5
Nitab4.5_0025769g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.0e-11 72.0 55 69.1
Nitab4.5_0005943g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.1e-10 70.1 47 76.6
Nitab4.5_0003860g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.3e-10 68.2 43 72.1
Nitab4.5_0027205g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.3e-10 68.2 65 55.4
Nitab4.5_0001339g0100 Nicotiana tabacum HOM05D002918 ORTHO05D003326 5.7e-10 67.8 41 78.0
Nitab4.5_0003467g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.7e-09 66.2 59 66.1
Nitab4.5_0003914g0090 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.7e-09 66.2 46 76.1
Nitab4.5_0002993g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-09 65.9 46 76.1
Nitab4.5_0003903g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-09 65.9 43 69.8
Nitab4.5_0001463g0080 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.8e-09 65.5 72 54.2
Nitab4.5_0008321g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.8e-09 65.5 45 73.3
Nitab4.5_0000286g0150 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.3e-09 64.3 41 75.6
Nitab4.5_0001362g0080 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.3e-09 64.3 53 62.3
Nitab4.5_0000006g0430 Nicotiana tabacum HOM05D002918 ORTHO05D003326 8.2e-09 63.9 48 66.7
Nitab4.5_0000043g0280 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.4e-08 63.2 55 60.0
Nitab4.5_0001308g0030 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.8e-08 62.8 47 66.0
Nitab4.5_0005385g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.8e-08 62.8 78 48.7
Nitab4.5_0000252g0210 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.1e-08 62.0 47 63.8
Nitab4.5_0002678g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.1e-08 62.0 57 57.9
Nitab4.5_0004066g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.1e-08 62.0 55 63.6
Nitab4.5_0000357g0160 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.5e-07 59.7 52 65.4
Nitab4.5_0000515g0150 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.0e-07 59.3 60 56.7
Nitab4.5_0002119g0080 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.0e-07 59.3 55 60.0
Nitab4.5_0000564g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.6e-07 58.9 33 84.8
Nitab4.5_0000111g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.5e-07 58.2 55 58.2
Nitab4.5_0000859g0290 Nicotiana tabacum HOM05D002918 ORTHO05D003326 4.5e-07 58.2 38 76.3
Nitab4.5_0002957g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 5.9e-07 57.8 52 61.5
Nitab4.5_0000992g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.3e-06 56.6 40 67.5
Nitab4.5_0007780g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.2e-06 55.8 55 58.2
Nitab4.5_0001726g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.8e-06 55.1 78 43.6
Nitab4.5_0008387g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 5.0e-06 54.7 71 46.5
Nitab4.5_0004398g0040 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.5e-06 54.3 38 71.1
Sopen07g009600 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-06 54.3 50 52.0
Nitab4.5_0000792g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 8.5e-06 53.9 34 79.4
Sopen05g017740 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-06 53.9 50 52.0
Sopen06g013330 Solanum pennellii HOM05D000004 ORTHO05D000034 8.5e-06 53.9 50 52.0


User provided reference genes

Program Settings