Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 1.7e-94 349.4 177 100.0
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 8.3e-70 267.3 198 75.3
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 4.0e-64 248.4 198 71.2
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 8.3e-62 240.7 195 69.2
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.0e-59 233.8 195 68.2
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.1e-45 187.2 179 59.2
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.1e-45 187.2 179 59.2
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 3.2e-45 185.7 200 54.0
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 2.1e-44 183.0 198 56.1
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 7.8e-44 181.0 191 59.2
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.0e-43 180.6 154 63.6
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 8.7e-43 177.6 203 53.7
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 1.1e-42 177.2 203 53.7
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 2.5e-42 176.0 198 53.0
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 7.3e-42 174.5 195 53.3
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.6e-41 173.3 203 53.2
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 2.8e-41 172.6 176 55.1
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 3.6e-41 172.2 177 58.2
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 3.6e-41 172.2 177 58.2
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 4.8e-41 171.8 199 52.8
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.8e-41 171.8 119 73.9
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 6.2e-41 171.4 201 53.7
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.2e-41 171.4 189 53.4
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.1e-40 170.6 197 52.3
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.8e-40 169.9 200 53.0
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 3.1e-40 169.1 199 52.3
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 4.0e-40 168.7 169 57.4
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 6.9e-40 167.9 204 51.5
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 6.9e-40 167.9 196 51.5
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 6.9e-40 167.9 145 61.4
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 1.5e-39 166.8 200 50.5
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.5e-39 166.8 184 52.7
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.5e-39 166.8 192 50.5
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.0e-39 166.4 193 52.8
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 2.6e-39 166.0 200 51.0
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 5.8e-39 164.9 200 52.5
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 5.8e-39 164.9 181 54.1
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 9.9e-39 164.1 138 63.8
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.7e-38 163.3 200 52.5
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 2.2e-38 162.9 197 53.3
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 4.9e-38 161.8 196 51.5
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 3.2e-37 159.1 184 50.0
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 4.2e-37 158.7 185 49.2
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 5.4e-37 158.3 171 53.2
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 3.5e-36 155.6 145 60.0
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 3.5e-36 155.6 143 59.4
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 4.6e-36 155.2 190 50.0
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 6.0e-36 154.8 188 50.0
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 7.9e-36 154.5 199 47.2
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.0e-35 154.1 146 58.9
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.7e-35 153.3 187 49.7
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 3.9e-35 152.1 157 54.1
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.1e-34 150.6 163 51.5
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 1.1e-34 150.6 202 46.0
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 3.3e-34 149.1 187 47.6
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 4.3e-34 148.7 140 57.9
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 5.6e-34 148.3 140 57.1
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.3e-33 147.1 202 46.0
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.3e-33 147.1 138 58.0
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.1e-32 144.1 139 54.7
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.8e-32 143.3 198 44.4
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.4e-32 142.9 186 50.0
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 3.1e-32 142.5 114 66.7
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 3.4e-31 139.0 202 46.0
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 5.8e-31 138.3 114 65.8
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 9.9e-31 137.5 132 56.1
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.7e-30 136.7 143 54.5
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.2e-30 136.3 183 48.1
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.8e-30 135.6 142 54.9
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 8.4e-30 134.4 124 59.7
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 8.4e-30 134.4 147 55.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 1.1e-29 134.0 125 58.4
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 1.1e-29 134.0 125 58.4
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.4e-29 133.7 126 57.9
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.9e-29 133.3 137 56.9
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 1.9e-29 133.3 189 46.6
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 4.2e-29 132.1 188 46.3
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.4e-29 131.7 135 54.8
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 5.4e-29 131.7 151 50.3
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 9.3e-29 131.0 124 58.9
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 9.3e-29 131.0 126 56.3
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 9.3e-29 131.0 126 56.3
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 9.3e-29 131.0 126 56.3
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 1.6e-28 130.2 125 56.8
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 3.5e-28 129.0 202 43.1
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 7.9e-28 127.9 172 45.9
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.3e-27 127.1 146 50.0
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.8e-27 126.7 121 60.3
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 5.1e-27 125.2 166 47.6
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 9.6e-26 120.9 152 50.0
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.1e-24 115.9 151 46.4
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 3.1e-24 115.9 78 71.8
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 3.4e-23 112.5 127 51.2
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 4.5e-23 112.1 79 65.8
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.3e-22 110.5 79 65.8
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 2.1e-20 103.2 79 60.8
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 4.6e-20 102.1 139 42.4
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.3e-17 94.0 146 41.1
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 1.1e-16 90.9 123 39.8
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 3.4e-15 85.9 180 32.8
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 2.1e-12 76.6 53 69.8
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 6.1e-12 75.1 97 45.4
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.3e-10 68.9 52 63.5
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.7e-09 65.9 89 46.1
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.1e-08 64.3 89 44.9


User provided reference genes

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