Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.8e-245 851.7 476 100.0
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 4.5e-219 764.6 477 91.4
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 6.9e-188 661.0 487 81.9
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.4e-183 646.7 487 80.9
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.8e-183 646.4 487 80.9
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 2.6e-179 632.5 485 79.2
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 2.9e-178 629.0 480 79.6
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 1.2e-136 490.7 494 62.6
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.2e-131 474.2 488 61.9
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 3.8e-125 452.6 495 60.6
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 4.6e-123 445.7 526 55.9
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 8.4e-117 424.9 483 58.6
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.6e-115 420.6 511 52.6
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.5e-113 414.1 493 55.0
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 2.5e-113 413.3 493 57.4
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 9.6e-113 411.4 500 53.0
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.1e-111 407.9 461 57.9
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.2e-110 404.4 497 54.5
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 3.2e-108 396.4 476 58.2
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 1.3e-104 384.4 507 56.8
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 1.7e-101 374.0 495 52.3
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.9e-101 373.2 498 49.4
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.0e-98 364.8 496 49.8
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 6.7e-98 362.1 497 49.1
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 6.7e-98 362.1 490 49.4
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 8.7e-98 361.7 494 50.6
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 2.5e-97 360.1 496 51.4
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 3.3e-97 359.8 498 49.6
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 9.6e-97 358.2 488 49.2
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 1.3e-96 357.8 498 49.0
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.8e-96 356.7 493 50.1
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 2.8e-96 356.7 496 48.6
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.8e-96 356.7 490 48.6
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 6.2e-96 355.5 496 48.4
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 9.0e-95 351.7 490 48.8
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.5e-94 350.9 490 49.8
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 2.0e-94 350.5 492 50.4
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 2.2e-93 347.1 490 48.8
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 4.9e-93 345.9 489 49.5
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 6.5e-93 345.5 494 52.4
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.9e-92 344.0 490 48.8
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 1.6e-91 340.9 495 47.9
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 6.0e-91 339.0 496 50.6
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 7.9e-91 338.6 487 48.3
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.0e-90 338.2 500 51.8
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 8.7e-90 335.1 496 48.0
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 3.3e-89 333.2 503 47.1
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 3.3e-89 333.2 490 46.3
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.7e-89 332.4 496 47.8
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 2.8e-88 330.1 502 52.2
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.4e-87 327.8 497 48.3
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 9.0e-87 325.1 495 49.9
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.2e-86 324.7 496 48.2
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.3e-85 321.2 496 47.2
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 5.5e-84 315.8 487 51.7
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 3.9e-82 309.7 483 45.3
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 6.7e-82 308.9 488 50.2
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-81 308.1 443 48.8
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 3.4e-78 296.6 506 44.3
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 5.0e-77 292.7 497 45.1
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.4e-74 284.6 494 44.5
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 2.3e-74 283.9 494 43.9
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 6.7e-74 282.3 371 53.1
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 2.0e-73 280.8 477 44.0
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.3e-72 278.1 485 43.5
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.4e-71 274.6 488 39.5
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 1.4e-71 274.6 467 41.8
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 5.9e-70 269.2 481 40.1
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 3.8e-69 266.5 480 45.6
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 8.5e-69 265.4 494 42.5
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 3.2e-68 263.5 485 40.2
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 9.7e-65 251.9 482 40.7
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 1.1e-63 248.4 470 41.1
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.4e-63 248.1 485 43.9
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 1.8e-63 247.7 483 39.8
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 9.1e-63 245.4 484 42.8
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 5.9e-62 242.7 471 40.8
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 7.7e-62 242.3 332 50.0
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 3.8e-61 240.0 518 39.2
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 6.5e-61 239.2 449 40.3
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 8.5e-61 238.8 481 38.9
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 2.5e-60 237.3 477 38.8
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.2e-60 236.5 449 42.1
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 5.5e-60 236.1 517 39.1
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.3e-58 230.7 536 39.6
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 2.3e-58 230.7 492 40.9
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 2.3e-58 230.7 493 41.4
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.6e-54 218.0 499 37.3
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 3.5e-54 216.9 477 37.3
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 4.5e-54 216.5 478 38.1
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 7.7e-54 215.7 477 37.1
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 6.5e-53 212.6 478 36.8
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 2.4e-47 194.1 508 37.8
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 1.6e-46 191.4 511 35.8
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 2.7e-46 190.7 396 38.9
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.7e-45 188.0 509 36.9
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 1.7e-45 188.0 467 38.3
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 6.8e-42 176.0 472 34.7
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.3e-40 171.8 468 33.3
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 4.1e-39 166.8 476 33.4
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 9.2e-39 165.6 473 32.8
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 4.5e-38 163.3 407 36.1
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 1.1e-36 158.7 550 33.1
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 3.4e-33 147.1 184 51.1
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 9.8e-33 145.6 397 35.3
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 3.5e-30 137.1 159 51.6
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 1.7e-29 134.8 496 31.5
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.1e-28 132.1 179 49.7
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 4.3e-28 130.2 159 49.7
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 3.6e-27 127.1 159 50.3
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 2.0e-25 121.3 167 48.5
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 3.4e-25 120.6 175 44.6
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 4.4e-25 120.2 397 34.3
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 1.9e-23 114.8 481 29.5
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 2.8e-19 100.9 512 27.7
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.7e-13 81.6 463 25.5
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 5.6e-12 76.6 482 26.6
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 6.2e-11 73.2 91 50.5
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 1.1e-07 62.4 66 47.0
Lsat_1_v5_gn_5_187260 Lactuca sativa HOM05D006426 ORTHO05D007737 1.4e-07 62.0 154 39.6
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 2.4e-07 61.2 169 37.3


User provided reference genes

Program Settings